Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT5G09590 - ( MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP binding )
225 Proteins interacs with AT5G09590Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT4G24190 | Predictedin vivoin vitroAffinity Capture-MS | FSW = 0.0228
| Class C:vacuoleplastidmitochondrion | SHD (SHEPHERD) ATP BINDING / UNFOLDED PROTEIN BINDING |
AT4G14880 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0087
| Class C:vacuoleplastid | OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1) CYSTEINE SYNTHASE |
AT4G37910 | PredictedShared biological functionGene fusion methodPhylogenetic profile methodCo-expression | FSW = 0.0366
| Class C:vacuolemitochondrion | MTHSC70-1 (MITOCHONDRIAL HEAT SHOCK PROTEIN 70-1) ATP BINDING |
AT3G09440 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.0326
| Class C:vacuole | HEAT SHOCK COGNATE 70 KDA PROTEIN 3 (HSC70-3) (HSP70-3) |
AT2G37270 | Predictedinterologs mapping | FSW = 0.0275
| Class C:vacuole | ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT1G11260 | PredictedSynthetic Lethality | FSW = 0.0179
| Class C:vacuole | STP1 (SUGAR TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER |
AT2G43160 | PredictedSynthetic Lethality | FSW = 0.0087
| Class C:vacuole | EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN |
AT1G15880 | PredictedSynthetic Lethality | FSW = 0.0241
| Class C:vacuole | GOS11 (GOLGI SNARE 11) SNARE BINDING |
AT5G45130 | PredictedSynthetic Lethality | FSW = 0.0089
| Class C:vacuole | RHA1 (RAB HOMOLOG 1) GTP BINDING |
AT1G44170 | PredictedSynthetic Lethality | FSW = 0.0159
| Class C:vacuole | ALDH3H1 (ALDEHYDE DEHYDROGENASE 3H1) 3-CHLOROALLYL ALDEHYDE DEHYDROGENASE/ ALDEHYDE DEHYDROGENASE (NAD) |
AT5G07090 | PredictedPhenotypic Enhancement | FSW = 0.0867
| Class C:vacuole | 40S RIBOSOMAL PROTEIN S4 (RPS4B) |
AT3G22110 | PredictedPhenotypic Enhancement | FSW = 0.1069
| Class C:vacuole | PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE |
AT3G62870 | PredictedAffinity Capture-MSSynthetic Lethalitysynthetic growth defect | FSW = 0.1555
| Class C:vacuole | 60S RIBOSOMAL PROTEIN L7A (RPL7AB) |
AT4G24280 | PredictedShared biological functionPhylogenetic profile methodCo-expression | FSW = 0.0162
| Class C:plastidmitochondrion | CPHSC70-1 (CHLOROPLAST HEAT SHOCK PROTEIN 70-1) ATP BINDING |
AT4G35090 | PredictedSynthetic Lethality | FSW = 0.0882
| Class C:plastidmitochondrion | CAT2 (CATALASE 2) CATALASE |
AT3G55400 | PredictedSynthetic Lethality | FSW = 0.1556
| Class C:plastidmitochondrion | OVA1 (OVULE ABORTION 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ METHIONINE-TRNA LIGASE/ NUCLEOTIDE BINDING |
AT1G32470 | PredictedPhenotypic Enhancement | FSW = 0.0691
| Class C:plastidmitochondrion | GLYCINE CLEAVAGE SYSTEM H PROTEIN MITOCHONDRIAL PUTATIVE |
AT3G59760 | Predictedinteraction prediction | FSW = 0.0026
| Class C:plastidmitochondrion | OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C) ATP BINDING / CYSTEINE SYNTHASE |
AT3G22890 | PredictedSynthetic Lethality | FSW = 0.1106
| Class C:plastid | APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP) |
AT1G01620 | PredictedSynthetic Lethality | FSW = 0.0191
| Class C:plastid | PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C) WATER CHANNEL |
AT1G74030 | PredictedAffinity Capture-MSAffinity Capture-MSinteraction prediction | FSW = 0.0167
| Class C:plastid | ENOLASE PUTATIVE |
AT3G20550 | PredictedSynthetic Lethality | FSW = 0.0314
| Class C:plastid | DDL (DAWDLE) |
AT1G55920 | PredictedPhenotypic Enhancement | FSW = 0.2392
| Class C:plastid | ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE |
AT5G65430 | PredictedPhenotypic Enhancement | FSW = 0.1270
| Class C:plastid | GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING |
AT5G16150 | PredictedAffinity Capture-WesternAffinity Capture-WesternReconstituted Complex | FSW = 0.0496
| Class C:plastid | PGLCT (PLASTIDIC GLC TRANSLOCATOR) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER |
AT5G04740 | Predictedtwo hybrid | FSW = 0.0054
| Class C:plastid | ACT DOMAIN-CONTAINING PROTEIN |
AT4G39960 | PredictedReconstituted ComplexAffinity Capture-WesternCo-purificationbiochemical | FSW = 0.0255
| Class C:plastid | DNAJ HEAT SHOCK FAMILY PROTEIN |
AT2G22360 | Predictedinterologs mappinginteraction prediction | FSW = 0.0088
| Class C:plastid | DNAJ HEAT SHOCK FAMILY PROTEIN |
AT5G49910 | PredictedShared biological functionGene neighbors methodPhylogenetic profile methodCo-expression | FSW = 0.0278
| Class C:plastid | CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2) ATP BINDING / UNFOLDED PROTEIN BINDING |
AT1G56050 | PredictedPhenotypic Enhancement | FSW = 0.1602
| Class C:plastid | GTP-BINDING PROTEIN-RELATED |
AT2G45300 | PredictedPhenotypic Enhancement | FSW = 0.0698
| Class C:plastid | 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE / EPSP SYNTHASE |
AT5G15450 | Predictedsynthetic growth defectinterologs mappingPhenotypic Suppression | FSW = 0.1280
| Class C:plastid | CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING |
AT5G51820 | PredictedPhenotypic Suppression | FSW = 0.1869
| Class C:plastid | PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE |
AT3G54670 | PredictedPhenotypic Enhancement | FSW = 0.1039
| Class C:plastid | TTN8 (TITAN8) ATP BINDING / TRANSPORTER |
AT5G46110 | PredictedSynthetic Rescue | FSW = 0.0222
| Class C:plastid | APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2) ANTIPORTER/ TRIOSE-PHOSPHATE TRANSMEMBRANE TRANSPORTER |
AT2G33340 | PredictedSynthetic LethalitySynthetic Lethalitysynthetic growth defect | FSW = 0.0275
| Class C:plastid | NUCLEOTIDE BINDING / UBIQUITIN-PROTEIN LIGASE |
AT4G32360 | PredictedAffinity Capture-WesternAffinity Capture-WesternReconstituted ComplexAffinity Capture-MS | FSW = 0.0652
| Class C:mitochondrion | NADP ADRENODOXIN-LIKE FERREDOXIN REDUCTASE |
AT3G29800 | Predictedinterologs mappinginterologs mappingSynthetic Lethalityinterologs mappingPhenotypic Enhancementsynthetic growth defect | FSW = 0.1220
| Class C:mitochondrion | AAA-TYPE ATPASE FAMILY |
AT3G54826 | Predictedtwo hybridAffinity Capture-Westerntwo hybridinterologs mappingAffinity Capture-MSAffinity Capture-WesternCo-purificationReconstituted Complex | FSW = 0.0214
| Class C:mitochondrion | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN CONTAINS INTERPRO DOMAIN/S ZINC FINGER ZIM17-TYPE (INTERPROIPR007853) HAS 284 BLAST HITS TO 284 PROTEINS IN 134 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 100 FUNGI - 79 PLANTS - 58 VIRUSES - 0 OTHER EUKARYOTES - 47 (SOURCE NCBI BLINK) |
AT2G20510 | Predictedinteraction predictionAffinity Capture-MSinterologs mappingAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-MSAffinity Capture-WesternReconstituted ComplexAffinity Capture-WesternAffinity Capture-WesternReconstituted Complextwo hybridAffinity Capture-MSCo-purificationSynthetic Lethalityinterologs mapping | FSW = 0.0536
| Class C:mitochondrion | ATTIM44-1 PROTEIN-TRANSMEMBRANE TRANSPORTING ATPASE |
AT3G61530 | PredictedSynthetic Lethality | FSW = 0.0133
| Class C:mitochondrion | PANB2 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE |
AT2G17270 | PredictedSynthetic Lethality | FSW = 0.0835
| Class C:mitochondrion | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN |
AT1G17530 | PredictedAffinity Capture-MSAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-Westernsynthetic growth defectAffinity Capture-MSCo-purificationinteraction prediction | FSW = 0.0207
| Class C:mitochondrion | ATTIM23-1 (TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23) P-P-BOND-HYDROLYSIS-DRIVEN PROTEIN TRANSMEMBRANE TRANSPORTER |
AT3G49920 | PredictedPhenotypic Suppression | FSW = 0.1072
| Class C:mitochondrion | VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5) VOLTAGE-GATED ANION CHANNEL |
AT2G30160 | PredictedSynthetic LethalitySynthetic LethalityPhenotypic Enhancement | FSW = 0.2908
| Class C:mitochondrion | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN |
AT1G20350 | Predictedinteraction predictionAffinity Capture-WesternAffinity Capture-WesternSynthetic Lethalityinterologs mappinginterologs mapping | FSW = 0.0289
| Class C:mitochondrion | ATTIM17-1 P-P-BOND-HYDROLYSIS-DRIVEN PROTEIN TRANSMEMBRANE TRANSPORTER/ PROTEIN TRANSPORTER |
AT3G44110 | Predictedtwo hybridtwo hybridCo-expression | FSW = 0.0071
| Unknown | ATJ3 PROTEIN BINDING |
AT5G57870 | PredictedSynthetic Lethality | FSW = 0.0707
| Unknown | EUKARYOTIC TRANSLATION INITIATION FACTOR 4F PUTATIVE / EIF-4F PUTATIVE |
AT1G45145 | PredictedPhenotypic Enhancement | FSW = 0.0612
| Unknown | ATTRX5 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR |
AT5G60540 | PredictedPhenotypic EnhancementSynthetic Lethality | FSW = 0.2721
| Unknown | PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION |
AT3G48750 | PredictedAffinity Capture-MS | FSW = 0.0073
| Unknown | CDC2 (CELL DIVISION CONTROL 2) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE |
AT3G17390 | PredictedSynthetic Lethality | FSW = 0.0175
| Unknown | MTO3 (METHIONINE OVER-ACCUMULATOR 3) METHIONINE ADENOSYLTRANSFERASE |
AT2G01630 | PredictedPhenotypic Suppression | FSW = 0.0707
| Unknown | GLYCOSYL HYDROLASE FAMILY 17 PROTEIN / BETA-13-GLUCANASE PUTATIVE |
AT5G52640 | Predictedinteraction predictionShared biological functionGene neighbors methodCo-expression | FSW = 0.0251
| Unknown | ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING |
AT1G55690 | PredictedSynthetic Lethality | FSW = 0.0495
| Unknown | SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN |
AT5G08570 | PredictedPhenotypic Enhancement | FSW = 0.0368
| Unknown | PYRUVATE KINASE PUTATIVE |
AT4G04340 | PredictedPhenotypic Suppression | FSW = 0.0622
| Unknown | EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED |
AT5G40370 | PredictedSynthetic Lethality | FSW = 0.0165
| Unknown | GLUTAREDOXIN PUTATIVE |
AT1G04750 | PredictedPhenotypic Enhancement | FSW = 0.1974
| Unknown | VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721) |
AT2G32670 | PredictedPhenotypic Enhancement | FSW = 0.1795
| Unknown | ATVAMP725 |
AT1G70730 | PredictedSynthetic Lethality | FSW = 0.0499
| Unknown | PHOSPHOGLUCOMUTASE CYTOPLASMIC PUTATIVE / GLUCOSE PHOSPHOMUTASE PUTATIVE |
AT5G03540 | PredictedSynthetic Rescueinterologs mappingSynthetic RescueSynthetic Lethality | FSW = 0.0576
| Unknown | ATEXO70A1 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1) PROTEIN BINDING |
AT5G12370 | PredictedAffinity Capture-MS | FSW = 0.0033
| Unknown | SEC10 (EXOCYST COMPLEX COMPONENT SEC10) |
AT5G58800 | PredictedReconstituted Complex | FSW = 0.0464
| Unknown | QUINONE REDUCTASE FAMILY PROTEIN |
AT1G31440 | Predictedtwo hybrid | FSW = 0.0175
| Unknown | SH3 DOMAIN-CONTAINING PROTEIN 1 (SH3P1) |
AT4G33090 | PredictedPhenotypic Suppression | FSW = 0.1319
| Unknown | APM1 (AMINOPEPTIDASE M1) AMINOPEPTIDASE |
AT4G15000 | PredictedAffinity Capture-Western | FSW = 0.0333
| Unknown | 60S RIBOSOMAL PROTEIN L27 (RPL27C) |
AT4G11420 | PredictedAffinity Capture-MS | FSW = 0.0081
| Unknown | EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A) TRANSLATION INITIATION FACTOR |
AT4G21680 | PredictedPhenotypic Suppression | FSW = 0.1046
| Unknown | PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN |
AT2G39480 | PredictedSynthetic Lethalityinterologs mapping | FSW = 0.1158
| Unknown | PGP6 (P-GLYCOPROTEIN 6) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES |
AT4G36860 | PredictedSynthetic Lethality | FSW = 0.0074
| Unknown | ZINC ION BINDING |
AT4G26110 | PredictedAffinity Capture-MSAffinity Capture-MSinteraction prediction | FSW = 0.0111
| Unknown | NAP11 (NUCLEOSOME ASSEMBLY PROTEIN11) DNA BINDING |
AT2G37790 | PredictedPhenotypic Enhancement | FSW = 0.1458
| Unknown | ALDO/KETO REDUCTASE FAMILY PROTEIN |
AT1G80050 | PredictedPhenotypic Suppression | FSW = 0.1862
| Unknown | APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) ADENINE PHOSPHORIBOSYLTRANSFERASE/ PHOSPHATE TRANSMEMBRANE TRANSPORTER |
AT4G18800 | PredictedPhenotypic Suppression | FSW = 0.1334
| Unknown | ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING |
AT2G34450 | PredictedSynthetic Lethalitytwo hybridAffinity Capture-Western | FSW = 0.1921
| Unknown | HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN |
AT3G21540 | Predictedinterologs mapping | FSW = 0.0332
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT4G34430 | PredictedAffinity Capture-MS | FSW = 0.0539
| Unknown | CHB3 DNA BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING |
AT3G07260 | PredictedSynthetic Lethality | FSW = 0.0747
| Unknown | FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN / FHA DOMAIN-CONTAINING PROTEIN |
AT3G52250 | PredictedPhenotypic Suppression | FSW = 0.1785
| Unknown | DNA BINDING / TRANSCRIPTION FACTOR |
AT5G37720 | PredictedAffinity Capture-MS | FSW = 0.0116
| Unknown | RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE |
AT1G76300 | PredictedPhenotypic Enhancement | FSW = 0.1596
| Unknown | SMD3 (SNRNP CORE PROTEIN SMD3) |
AT4G09800 | PredictedPhenotypic Suppression | FSW = 0.0891
| Unknown | RPS18C (S18 RIBOSOMAL PROTEIN) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME |
AT5G27720 | PredictedPhenotypic Enhancement | FSW = 0.0084
| Unknown | EMB1644 (EMBRYO DEFECTIVE 1644) |
AT2G07671 | PredictedAffinity Capture-Western | FSW = 0.0105
| Unknown | H+-TRANSPORTING TWO-SECTOR ATPASE C SUBUNIT FAMILY PROTEIN |
AT1G72560 | PredictedPhenotypic Enhancement | FSW = 0.0341
| Unknown | PSD (PAUSED) NUCLEOBASE NUCLEOSIDE NUCLEOTIDE AND NUCLEIC ACID TRANSMEMBRANE TRANSPORTER/ TRNA BINDING |
AT4G25340 | PredictedSynthetic LethalitySynthetic LethalityPhenotypic Enhancement | FSW = 0.2386
| Unknown | IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
AT5G60980 | PredictedPhenotypic Enhancement | FSW = 0.0588
| Unknown | NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN |
AT1G29330 | PredictedSynthetic LethalitySynthetic Lethalityinterologs mappinginterologs mapping | FSW = 0.1352
| Unknown | ERD2 (ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2) KDEL SEQUENCE BINDING / RECEPTOR |
AT2G19980 | PredictedPhenotypic Enhancement | FSW = 0.1820
| Unknown | ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN |
AT3G54840 | PredictedPhenotypic Suppression | FSW = 0.1986
| Unknown | ARA6 GTP BINDING / GTPASE |
AT3G07140 | PredictedPhenotypic Enhancement | FSW = 0.1691
| Unknown | GPI TRANSAMIDASE COMPONENT GPI16 SUBUNIT FAMILY PROTEIN |
AT5G66020 | PredictedPhenotypic Enhancement | FSW = 0.0243
| Unknown | ATSAC1B (SUPPRESSOR OF ACTIN 1B) PHOSPHATIDYLINOSITOL-45-BISPHOSPHATE 5-PHOSPHATASE |
AT1G01020 | PredictedSynthetic Lethality | FSW = 0.0470
| Unknown | ARV1 |
AT2G38960 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.0150
| Unknown | AERO2 (ARABIDOPSIS ENDOPLASMIC RETICULUM OXIDOREDUCTINS 2) FAD BINDING / ELECTRON CARRIER/ OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR / PROTEIN BINDING |
AT5G47720 | PredictedPhenotypic Enhancement | FSW = 0.0226
| Unknown | ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE |
AT3G60360 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.1319
| Unknown | EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14) |
AT4G39200 | PredictedSynthetic LethalitySynthetic LethalityPhenotypic Enhancementsynthetic growth defect | FSW = 0.2530
| Unknown | 40S RIBOSOMAL PROTEIN S25 (RPS25E) |
AT1G62800 | PredictedPhenotypic Suppression | FSW = 0.0950
| Unknown | ASP4 (ASPARTATE AMINOTRANSFERASE 4) CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE/ TRANSFERASE TRANSFERRING NITROGENOUS GROUPS |
AT1G17810 | PredictedPhenotypic Suppression | FSW = 0.0580
| Unknown | BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN) WATER CHANNEL |
AT1G73190 | PredictedSynthetic Lethality | FSW = 0.0497
| Unknown | TIP31 WATER CHANNEL |
AT4G02570 | PredictedSynthetic Lethality | FSW = 0.0085
| Unknown | ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) PROTEIN BINDING |
AT5G28060 | PredictedSynthetic Lethality | FSW = 0.0488
| Unknown | 40S RIBOSOMAL PROTEIN S24 (RPS24B) |
AT4G26840 | PredictedAffinity Capture-MS | FSW = 0.0123
| Unknown | SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG |
AT2G05840 | PredictedPhenotypic Suppression | FSW = 0.0257
| Unknown | PAA2 (20S PROTEASOME SUBUNIT PAA2) ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE |
AT5G59720 | PredictedSynthetic Lethality | FSW = 0.0121
| Unknown | HSP182 (HEAT SHOCK PROTEIN 182) |
AT1G57550 | PredictedSynthetic Lethality | FSW = 0.0385
| Unknown | HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE |
AT2G05170 | PredictedPhenotypic Enhancement | FSW = 0.0768
| Unknown | ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING |
AT3G14290 | PredictedSynthetic Lethality | FSW = 0.0276
| Unknown | PAE2 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE |
AT1G19730 | PredictedPhenotypic Suppression | FSW = 0.0419
| Unknown | ATTRX4 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR |
AT4G17190 | PredictedPhenotypic Suppression | FSW = 0.1295
| Unknown | FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE |
AT4G18060 | Predictedtwo hybrid | FSW = 0.0121
| Unknown | CLATHRIN BINDING |
AT3G54250 | Predictedtwo hybridAffinity Capture-Western | FSW = 0.0143
| Unknown | MEVALONATE DIPHOSPHATE DECARBOXYLASE PUTATIVE |
AT1G08260 | PredictedSynthetic Lethality | FSW = 0.0363
| Unknown | TIL1 (TILTED 1) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING |
AT1G09810 | PredictedPhenotypic Enhancement | FSW = 0.0216
| Unknown | ECT11 (EVOLUTIONARILY CONSERVED C-TERMINAL REGION 11) |
AT1G10980 | PredictedPhenotypic Enhancement | FSW = 0.0629
| Unknown | INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN VACUOLE EXPRESSED IN 8 PLANT STRUCTURES EXPRESSED DURING 6 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G616701) HAS 482 BLAST HITS TO 481 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 255 FUNGI - 99 PLANTS - 97 VIRUSES - 0 OTHER EUKARYOTES - 31 (SOURCE NCBI BLINK) |
AT1G12130 | PredictedSynthetic Lethality | FSW = 0.0326
| Unknown | FLAVIN-CONTAINING MONOOXYGENASE FAMILY PROTEIN / FMO FAMILY PROTEIN |
AT1G18830 | PredictedSynthetic Lethality | FSW = 0.0450
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT1G19750 | PredictedPhenotypic Enhancement | FSW = 0.1416
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT1G20693 | PredictedSynthetic LethalityPhenotypic Enhancementsynthetic growth defect | FSW = 0.2304
| Unknown | HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR |
AT1G20696 | PredictedSynthetic Lethality | FSW = 0.0390
| Unknown | HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR |
AT1G23460 | PredictedPhenotypic Suppression | FSW = 0.1167
| Unknown | POLYGALACTURONASE |
AT1G25155 | PredictedPhenotypic Suppression | FSW = 0.1677
| Unknown | ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE |
AT1G26690 | PredictedPhenotypic Enhancement | FSW = 0.1437
| Unknown | EMP24/GP25L/P24 FAMILY PROTEIN |
AT1G29150 | PredictedPhenotypic Enhancement | FSW = 0.0133
| Unknown | ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9) |
AT1G31170 | PredictedPhenotypic Enhancement | FSW = 0.1304
| Unknown | SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS |
AT1G34580 | PredictedPhenotypic EnhancementSynthetic Lethality | FSW = 0.1116
| Unknown | MONOSACCHARIDE TRANSPORTER PUTATIVE |
AT1G49520 | PredictedSynthetic Lethality | FSW = 0.1393
| Unknown | SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN |
AT1G57620 | PredictedSynthetic Lethality | FSW = 0.0622
| Unknown | EMP24/GP25L/P24 FAMILY PROTEIN |
AT1G59580 | PredictedSynthetic Lethalitytwo hybridPhenotypic EnhancementSynthetic Lethality | FSW = 0.0602
| Unknown | ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2) MAP KINASE/ KINASE/ PROTEIN KINASE |
AT1G60680 | PredictedPhenotypic Suppression | FSW = 0.1029
| Unknown | ALDO/KETO REDUCTASE FAMILY PROTEIN |
AT1G60710 | PredictedSynthetic Lethality | FSW = 0.0589
| Unknown | ATB2 OXIDOREDUCTASE |
AT1G61670 | PredictedSynthetic Lethality | FSW = 0.0613
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM INTEGRAL TO MEMBRANE CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G109801) HAS 473 BLAST HITS TO 471 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 242 FUNGI - 99 PLANTS - 92 VIRUSES - 0 OTHER EUKARYOTES - 38 (SOURCE NCBI BLINK) |
AT1G62880 | PredictedSynthetic Lethality | FSW = 0.0060
| Unknown | CORNICHON FAMILY PROTEIN |
AT1G65660 | PredictedAffinity Capture-Westernbiochemical | FSW = 0.0048
| Unknown | SMP1 (SWELLMAP 1) NUCLEIC ACID BINDING / SINGLE-STRANDED RNA BINDING |
AT1G68020 | PredictedPhenotypic Enhancement | FSW = 0.1563
| Unknown | ATTPS6 ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE |
AT1G78770 | PredictedPhenotypic Enhancementsynthetic growth defect | FSW = 0.1439
| Unknown | CELL DIVISION CYCLE FAMILY PROTEIN |
AT1G79730 | PredictedSynthetic Lethality | FSW = 0.0078
| Unknown | ELF7 (EARLY FLOWERING 7) |
AT2G15230 | PredictedSynthetic Lethality | FSW = 0.0418
| Unknown | ATLIP1 (ARABIDOPSIS THALIANA LIPASE 1) GALACTOLIPASE/ HYDROLASE/ PHOSPHOLIPASE/ TRIACYLGLYCEROL LIPASE |
AT2G15910 | PredictedPhenotypic Enhancement | FSW = 0.1024
| Unknown | CSL ZINC FINGER DOMAIN-CONTAINING PROTEIN |
AT2G19400 | PredictedSynthetic Lethality | FSW = 0.0058
| Unknown | PROTEIN KINASE PUTATIVE |
AT2G21730 | PredictedSynthetic Lethality | FSW = 0.0035
| Unknown | CAD2 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING |
AT2G24960 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.1999
| Unknown | UNKNOWN PROTEIN |
AT2G31260 | PredictedPhenotypic Enhancement | FSW = 0.0950
| Unknown | APG9 (AUTOPHAGY 9) |
AT2G32220 | PredictedSynthetic Lethality | FSW = 0.0216
| Unknown | 60S RIBOSOMAL PROTEIN L27 (RPL27A) |
AT2G34750 | PredictedPhenotypic Enhancement | FSW = 0.1484
| Unknown | RNA POLYMERASE I SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3 FAMILY PROTEIN |
AT2G37420 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.2766
| Unknown | KINESIN MOTOR PROTEIN-RELATED |
AT2G47830 | PredictedSynthetic Lethalitysynthetic growth defect | FSW = 0.0857
| Unknown | CATION EFFLUX FAMILY PROTEIN / METAL TOLERANCE PROTEIN PUTATIVE (MTPC1) |
AT2G48100 | PredictedPhenotypic Suppression | FSW = 0.1760
| Unknown | EXONUCLEASE FAMILY PROTEIN |
AT3G02000 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.1379
| Unknown | ROXY1 DISULFIDE OXIDOREDUCTASE |
AT3G06460 | PredictedAffinity Capture-WesternAffinity Capture-WesternReconstituted ComplexAffinity Capture-MS | FSW = 0.0841
| Unknown | GNS1/SUR4 MEMBRANE FAMILY PROTEIN |
AT3G06470 | PredictedPhenotypic Enhancement | FSW = 0.0504
| Unknown | GNS1/SUR4 MEMBRANE FAMILY PROTEIN |
AT3G06483 | PredictedPhenotypic Enhancement | FSW = 0.1719
| Unknown | PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE |
AT3G09640 | PredictedPhenotypic Enhancement | FSW = 0.1084
| Unknown | APX2 (ASCORBATE PEROXIDASE 2) L-ASCORBATE PEROXIDASE |
AT3G09800 | PredictedSynthetic LethalitySynthetic Lethalityinterologs mapping | FSW = 0.0999
| Unknown | PROTEIN BINDING |
AT3G12490 | PredictedSynthetic Lethality | FSW = 0.0306
| Unknown | CYSTEINE PROTEASE INHIBITOR PUTATIVE / CYSTATIN PUTATIVE |
AT3G13210 | PredictedPhenotypic Suppression | FSW = 0.0908
| Unknown | CROOKED NECK PROTEIN PUTATIVE / CELL CYCLE PROTEIN PUTATIVE |
AT3G13330 | PredictedSynthetic Lethality | FSW = 0.0705
| Unknown | BINDING |
AT3G18850 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.0829
| Unknown | LPAT5 ACYLTRANSFERASE |
AT3G29060 | PredictedSynthetic Lethality | FSW = 0.0673
| Unknown | LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 6 PLANT STRUCTURES EXPRESSED DURING L MATURE POLLEN STAGE M GERMINATED POLLEN STAGE 4 ANTHESIS PETAL DIFFERENTIATION AND EXPANSION STAGE CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G140401) HAS 970 BLAST HITS TO 889 PROTEINS IN 159 SPECIES ARCHAE - 2 BACTERIA - 5 METAZOA - 379 FUNGI - 260 PLANTS - 176 VIRUSES - 28 OTHER EUKARYOTES - 120 (SOURCE NCBI BLINK) |
AT3G29070 | PredictedSynthetic Lethality | FSW = 0.0418
| Unknown | PROTEIN TRANSMEMBRANE TRANSPORTER |
AT3G43980 | PredictedSynthetic Lethality | FSW = 0.0300
| Unknown | 40S RIBOSOMAL PROTEIN S29 (RPS29A) |
AT3G44190 | PredictedSynthetic Lethality | FSW = 0.0421
| Unknown | PYRIDINE NUCLEOTIDE-DISULPHIDE OXIDOREDUCTASE FAMILY PROTEIN |
AT3G46320 | PredictedSynthetic Lethality | FSW = 0.0150
| Unknown | HISTONE H4 |
AT3G50780 | PredictedPhenotypic Enhancement | FSW = 0.1059
| Unknown | INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS PRLI-INTERACTING FACTOR-RELATED (TAIRAT1G638501) HAS 173 BLAST HITS TO 173 PROTEINS IN 14 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 8 FUNGI - 0 PLANTS - 164 VIRUSES - 0 OTHER EUKARYOTES - 1 (SOURCE NCBI BLINK) |
AT3G50860 | PredictedPhenotypic Suppression | FSW = 0.0101
| Unknown | CLATHRIN ADAPTOR COMPLEX SMALL CHAIN FAMILY PROTEIN |
AT3G53650 | PredictedSynthetic Lethality | FSW = 0.0605
| Unknown | HISTONE H2B PUTATIVE |
AT3G59845 | PredictedAffinity Capture-MS | FSW = 0.0025
| Unknown | NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE |
AT3G60245 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MStwo hybrid | FSW = 0.0280
| Unknown | 60S RIBOSOMAL PROTEIN L37A (RPL37AC) |
AT4G00800 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.2270
| Unknown | BINDING / PROTEIN BINDING / ZINC ION BINDING |
AT4G04695 | PredictedPhenotypic Enhancement | FSW = 0.1605
| Unknown | CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
AT4G04950 | PredictedAffinity Capture-MS | FSW = 0.0228
| Unknown | THIOREDOXIN FAMILY PROTEIN |
AT4G10360 | PredictedPhenotypic Suppression | FSW = 0.1034
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G313002) HAS 453 BLAST HITS TO 451 PROTEINS IN 101 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 225 FUNGI - 97 PLANTS - 91 VIRUSES - 3 OTHER EUKARYOTES - 37 (SOURCE NCBI BLINK) |
AT4G13020 | PredictedPhenotypic Enhancement | FSW = 0.1325
| Unknown | MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT4G19645 | PredictedPhenotypic Enhancement | FSW = 0.1256
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G313002) HAS 401 BLAST HITS TO 401 PROTEINS IN 98 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 186 FUNGI - 102 PLANTS - 84 VIRUSES - 0 OTHER EUKARYOTES - 29 (SOURCE NCBI BLINK) |
AT4G21480 | PredictedPhenotypic Enhancement | FSW = 0.0415
| Unknown | CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER |
AT4G21560 | PredictedSynthetic Lethality | FSW = 0.0336
| Unknown | VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1) TRANSPORTER |
AT4G23895 | PredictedPhenotypic Enhancement | FSW = 0.0742
| Unknown | PLECKSTRIN HOMOLOGY (PH) DOMAIN-CONTAINING PROTEIN-RELATED |
AT4G24040 | PredictedSynthetic Lethality | FSW = 0.0956
| Unknown | TRE1 (TREHALASE 1) ALPHAALPHA-TREHALASE/ TREHALASE |
AT4G26510 | PredictedPhenotypic Enhancement | FSW = 0.1319
| Unknown | ATP BINDING / KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / URACIL PHOSPHORIBOSYLTRANSFERASE |
AT4G26780 | Predictedinteraction predictionAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternReconstituted ComplexCo-purificationinterologs mappingAffinity Capture-MSinterologs mapping | FSW = 0.0228
| Unknown | AR192 ADENYL-NUCLEOTIDE EXCHANGE FACTOR/ CHAPERONE BINDING / PROTEIN BINDING / PROTEIN HOMODIMERIZATION |
AT4G30100 | PredictedSynthetic LethalitySynthetic Lethality | FSW = 0.0443
| Unknown | TRNA-SPLICING ENDONUCLEASE POSITIVE EFFECTOR-RELATED |
AT4G30540 | PredictedSynthetic LethalitySynthetic Lethality | FSW = 0.0263
| Unknown | GLUTAMINE AMIDOTRANSFERASE CLASS-I DOMAIN-CONTAINING PROTEIN |
AT4G33950 | PredictedSynthetic Lethality | FSW = 0.1340
| Unknown | OST1 (OPEN STOMATA 1) CALCIUM-DEPENDENT PROTEIN SERINE/THREONINE KINASE/ KINASE/ PROTEIN KINASE |
AT4G36050 | PredictedPhenotypic Suppression | FSW = 0.0781
| Unknown | ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN |
AT4G36070 | PredictedSynthetic Lethality | FSW = 0.0527
| Unknown | CPK18 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G02560 | PredictedAffinity Capture-MS | FSW = 0.0060
| Unknown | HTA12 DNA BINDING |
AT5G04420 | PredictedSynthetic Lethality | FSW = 0.0552
| Unknown | KELCH REPEAT-CONTAINING PROTEIN |
AT5G05070 | PredictedPhenotypic EnhancementSynthetic Lethality | FSW = 0.0812
| Unknown | ZINC ION BINDING |
AT5G07950 | PredictedSynthetic Lethality | FSW = 0.0511
| Unknown | UNKNOWN PROTEIN |
AT1G09270 | PredictedPhenotypic Enhancement | FSW = 0.0614
| Unknown | IMPA-4 (IMPORTIN ALPHA ISOFORM 4) BINDING / PROTEIN TRANSPORTER |
AT1G10090 | Predictedsynthetic growth defect | FSW = 0.0876
| Unknown | UNKNOWN PROTEIN |
AT1G11510 | Predictedsynthetic growth defect | FSW = 0.1678
| Unknown | DNA-BINDING STOREKEEPER PROTEIN-RELATED |
AT1G21370 | PredictedPhenotypic Suppression | FSW = 0.1257
| Unknown | UNKNOWN PROTEIN |
AT1G29970 | PredictedPhenotypic Enhancement | FSW = 0.1482
| Unknown | RPL18AA (60S RIBOSOMAL PROTEIN L18A-1) |
AT1G55300 | PredictedPhenotypic Suppression | FSW = 0.1553
| Unknown | TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR |
AT1G75290 | PredictedPhenotypic Enhancement | FSW = 0.0654
| Unknown | OXIDOREDUCTASE ACTING ON NADH OR NADPH |
AT2G03130 | PredictedPhenotypic Suppression | FSW = 0.1976
| Unknown | RIBOSOMAL PROTEIN L12 FAMILY PROTEIN |
AT2G27170 | PredictedReconstituted Complex | FSW = 0.0192
| Unknown | TTN7 (TITAN7) ATP BINDING / PROTEIN BINDING |
AT2G27920 | Predictedbiochemicalbiochemical | FSW = 0.0247
| Unknown | SCPL51 (SERINE CARBOXYPEPTIDASE-LIKE 51) SERINE-TYPE CARBOXYPEPTIDASE |
AT2G42005 | PredictedPhenotypic Suppression | FSW = 0.0351
| Unknown | AMINO ACID TRANSPORTER FAMILY PROTEIN |
AT2G46280 | PredictedReconstituted Complex | FSW = 0.0403
| Unknown | TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1) NUCLEOTIDE BINDING / PROTEIN BINDING |
AT3G11240 | PredictedPhenotypic Enhancement | FSW = 0.1506
| Unknown | ATE2 (ARGININE-TRNA PROTEIN TRANSFERASE 2) ARGINYLTRANSFERASE |
AT3G11290 | PredictedPhenotypic Enhancement | FSW = 0.0933
| Unknown | UNKNOWN PROTEIN |
AT3G25900 | PredictedPhenotypic Suppression | FSW = 0.1293
| Unknown | HMT-1 HOMOCYSTEINE S-METHYLTRANSFERASE |
AT3G59630 | PredictedAffinity Capture-MS | FSW = 0.0255
| Unknown | DIPHTHAMIDE SYNTHESIS DPH2 FAMILY PROTEIN |
AT4G27130 | PredictedPhenotypic Enhancement | FSW = 0.1698
| Unknown | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE |
AT4G35620 | Predictedbiochemical | FSW = 0.0275
| Unknown | CYCB22 (CYCLIN B22) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR |
AT5G01430 | PredictedPhenotypic Enhancement | FSW = 0.1706
| Unknown | GOT1-LIKE FAMILY PROTEIN |
AT5G04800 | PredictedPhenotypic Enhancement | FSW = 0.1335
| Unknown | 40S RIBOSOMAL PROTEIN S17 (RPS17D) |
AT5G13700 | PredictedPhenotypic Enhancement | FSW = 0.0300
| Unknown | ATPAO1 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 1) FAD BINDING / POLYAMINE OXIDASE |
AT5G14060 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.2620
| Unknown | CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE |
AT5G52200 | PredictedSynthetic LethalitySynthetic Lethality | FSW = 0.1072
| Unknown | UNKNOWN PROTEIN |
AT5G24840 | PredictedPhenotypic Enhancement | FSW = 0.1136
| Unknown | TRNA (GUANINE-N7-)-METHYLTRANSFERASE |
AT5G39500 | PredictedPhenotypic Suppression | FSW = 0.0230
| Unknown | PATTERN FORMATION PROTEIN PUTATIVE |
AT5G45620 | PredictedPhenotypic Enhancement | FSW = 0.1502
| Unknown | 26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9) |
AT5G46410 | PredictedSynthetic Lethality | FSW = 0.0282
| Unknown | NLI INTERACTING FACTOR (NIF) FAMILY PROTEIN |
AT5G49970 | PredictedPhenotypic Suppression | FSW = 0.1365
| Unknown | ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE |
AT5G53120 | PredictedSynthetic Lethality | FSW = 0.1099
| Unknown | SPDS3 (SPERMIDINE SYNTHASE 3) SPERMIDINE SYNTHASE/ SPERMINE SYNTHASE |
AT5G53300 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.0135
| Unknown | UBC10 (UBIQUITIN-CONJUGATING ENZYME 10) UBIQUITIN-PROTEIN LIGASE |
AT5G59490 | PredictedPhenotypic Enhancement | FSW = 0.0082
| Unknown | HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN |
AT5G61010 | PredictedPhenotypic Enhancement | FSW = 0.0612
| Unknown | ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2) PROTEIN BINDING |
AT5G61220 | PredictedSynthetic Lethality | FSW = 0.0382
| Unknown | COMPLEX 1 FAMILY PROTEIN / LVR FAMILY PROTEIN |
AT5G64760 | PredictedPhenotypic Enhancement | FSW = 0.2191
| Unknown | RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B) |
ATCG00905 | PredictedPhenotypic Enhancement | FSW = 0.0377
| Unknown | CHLOROPLAST GENE ENCODING RIBOSOMAL PROTEIN S12 THE GENE IS LOCATED IN THREE DISTINCT LOCI ON THE CHLOROPLAST GENOME AND IS TRANSPLICED TO MAKE ONE TRANSCRIPT |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454