Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G37910 - ( mtHsc70-1 (mitochondrial heat shock protein 70-1) ATP binding )

126 Proteins interacs with AT4G37910
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT5G22290

Experimental

pull down

FSW = 0.0036

Class B:

vacuole

nucleus

mitochondrion

cytosol

ANAC089 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 89) TRANSCRIPTION FACTOR
AT3G01280

Predicted

Affinity Capture-MS

Co-expression

FSW = 0.0014

Class C:

vacuole

mitochondrion

VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1) VOLTAGE-GATED ANION CHANNEL
AT4G24190

Predicted

in vivo

in vitro

Affinity Capture-MS

FSW = 0.0271

Class C:

vacuole

mitochondrion

SHD (SHEPHERD) ATP BINDING / UNFOLDED PROTEIN BINDING
AT2G33210

Predicted

pull down

FSW = 0.2022

Class C:

vacuole

mitochondrion

HSP60-2 (HEAT SHOCK PROTEIN 60-2) ATP BINDING
AT5G09590

Predicted

Shared biological function

Gene fusion method

Phylogenetic profile method

Co-expression

FSW = 0.0366

Class C:

vacuole

mitochondrion

MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT4G09320

Predicted

pull down

FSW = 0.0103

Class C:

vacuole

NDPK1 ATP BINDING / NUCLEOSIDE DIPHOSPHATE KINASE
AT1G78380

Predicted

pull down

FSW = 0.0361

Class C:

vacuole

ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19) GLUTATHIONE BINDING / GLUTATHIONE TRANSFERASE
AT2G36530

Predicted

Affinity Capture-MS

pull down

Affinity Capture-MS

FSW = 0.0331

Class C:

vacuole

LOS2 COPPER ION BINDING / PHOSPHOPYRUVATE HYDRATASE
AT1G67940

Predicted

pull down

FSW = 0.0407

Class C:

vacuole

ATNAP3 TRANSPORTER
AT1G53000

Predicted

pull down

FSW = 0.0860

Class C:

mitochondrion

CYTIDYLYLTRANSFERASE FAMILY
AT4G24280

Predicted

Shared biological function

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.0277

Class C:

mitochondrion

CPHSC70-1 (CHLOROPLAST HEAT SHOCK PROTEIN 70-1) ATP BINDING
AT5G20720

Predicted

pull down

FSW = 0.0427

Class C:

mitochondrion

CPN20 (CHAPERONIN 20) CALMODULIN BINDING
AT2G21170

Predicted

pull down

FSW = 0.0303

Class C:

mitochondrion

TIM (TRIOSEPHOSPHATE ISOMERASE) CATALYTIC/ TRIOSE-PHOSPHATE ISOMERASE
AT4G33760

Predicted

comigration in non denaturing gel electrophoresis

FSW = 0.0399

Class C:

mitochondrion

TRNA SYNTHETASE CLASS II (D K AND N) FAMILY PROTEIN
AT3G10690

Predicted

pull down

FSW = 0.0822

Class C:

mitochondrion

DNA GYRASE SUBUNIT A FAMILY PROTEIN
AT5G23140

Predicted

pull down

FSW = 0.1705

Class C:

mitochondrion

NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7) SERINE-TYPE ENDOPEPTIDASE
AT1G56190

Predicted

pull down

FSW = 0.0486

Class C:

mitochondrion

PHOSPHOGLYCERATE KINASE PUTATIVE
AT2G04842

Predicted

pull down

FSW = 0.0948

Class C:

mitochondrion

EMB2761 (EMBRYO DEFECTIVE 2761) ATP BINDING / AMINOACYL-TRNA LIGASE/ LIGASE FORMING AMINOACYL-TRNA AND RELATED COMPOUNDS / NUCLEOTIDE BINDING / THREONINE-TRNA LIGASE
AT3G02660

Predicted

pull down

FSW = 0.0271

Class C:

mitochondrion

EMB2768 (EMBRYO DEFECTIVE 2768) ATP BINDING / RNA BINDING / AMINOACYL-TRNA LIGASE/ NUCLEOTIDE BINDING / TYROSINE-TRNA LIGASE
AT5G22800

Predicted

pull down

FSW = 0.0414

Class C:

mitochondrion

EMB1030 (EMBRYO DEFECTIVE 1030) ATP BINDING / ALANINE-TRNA LIGASE/ LIGASE FORMING AMINOACYL-TRNA AND RELATED COMPOUNDS / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT5G52520

Predicted

pull down

FSW = 0.0170

Class C:

mitochondrion

OVA6 (OVULE ABORTION 6) ATP BINDING / AMINOACYL-TRNA LIGASE/ NUCLEOTIDE BINDING / PROLINE-TRNA LIGASE
AT2G43750

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0095

Class C:

mitochondrion

OASB (O-ACETYLSERINE (THIOL) LYASE B) CYSTEINE SYNTHASE
AT2G04540

Predicted

pull down

FSW = 0.0155

Class C:

mitochondrion

3-OXOACYL-(ACYL-CARRIER-PROTEIN) SYNTHASE II PUTATIVE
AT1G50940

Predicted

pull down

FSW = 0.0376

Class C:

mitochondrion

ETFALPHA (ELECTRON TRANSFER FLAVOPROTEIN ALPHA) FAD BINDING / ELECTRON CARRIER
AT3G54826

Predicted

Affinity Capture-Western

interologs mapping

FSW = 0.0231

Class C:

mitochondrion

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN CONTAINS INTERPRO DOMAIN/S ZINC FINGER ZIM17-TYPE (INTERPROIPR007853) HAS 284 BLAST HITS TO 284 PROTEINS IN 134 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 100 FUNGI - 79 PLANTS - 58 VIRUSES - 0 OTHER EUKARYOTES - 47 (SOURCE NCBI BLINK)
AT4G02580

Predicted

pull down

FSW = 0.0154

Class C:

mitochondrion

NADH-UBIQUINONE OXIDOREDUCTASE 24 KDA SUBUNIT PUTATIVE
AT4G02930

Predicted

pull down

FSW = 0.1803

Class C:

mitochondrion

ELONGATION FACTOR TU PUTATIVE / EF-TU PUTATIVE
AT4G11060

Predicted

pull down

FSW = 0.1207

Class C:

mitochondrion

MTSSB (MITOCHONDRIALLY TARGETED SINGLE-STRANDED DNA BINDING PROTEIN) SINGLE-STRANDED DNA BINDING
AT5G43430

Predicted

pull down

FSW = 0.0290

Class C:

mitochondrion

ETFBETA ELECTRON CARRIER
AT5G26860

Predicted

pull down

FSW = 0.0959

Class C:

mitochondrion

LON1 (LON PROTEASE 1) ATP BINDING / ATP-DEPENDENT PEPTIDASE/ SERINE-TYPE PEPTIDASE
AT2G20510

Predicted

Reconstituted Complex

interologs mapping

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-Western

Co-purification

Reconstituted Complex

Synthetic Lethality

two hybrid

FSW = 0.0204

Class C:

mitochondrion

ATTIM44-1 PROTEIN-TRANSMEMBRANE TRANSPORTING ATPASE
AT2G47510

Predicted

pull down

FSW = 0.0118

Class C:

mitochondrion

FUM1 (FUMARASE 1) CATALYTIC/ FUMARATE HYDRATASE
AT5G65720

Predicted

pull down

FSW = 0.0056

Class C:

mitochondrion

NFS1 ATP BINDING / CYSTEINE DESULFURASE/ TRANSAMINASE
AT1G17530

Predicted

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Co-purification

synthetic growth defect

FSW = 0.0472

Class C:

mitochondrion

ATTIM23-1 (TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23) P-P-BOND-HYDROLYSIS-DRIVEN PROTEIN TRANSMEMBRANE TRANSPORTER
AT1G20350

Predicted

Affinity Capture-Western

Affinity Capture-Western

interologs mapping

Synthetic Lethality

FSW = 0.0505

Class C:

mitochondrion

ATTIM17-1 P-P-BOND-HYDROLYSIS-DRIVEN PROTEIN TRANSMEMBRANE TRANSPORTER/ PROTEIN TRANSPORTER
AT5G56730

Predicted

pull down

FSW = 0.0079

Unknown

PEPTIDASE M16 FAMILY PROTEIN / INSULINASE FAMILY PROTEIN
AT3G12290

Predicted

pull down

FSW = 0.0308

Unknown

TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE PUTATIVE
AT1G74710

Predicted

pull down

FSW = 0.0054

Unknown

ISOCHORISMATE SYNTHASE 1 (ICS1) / ISOCHORISMATE MUTASE
AT3G27925

Predicted

pull down

FSW = 0.0489

Unknown

DEGP1 (DEGP PROTEASE 1) SERINE-TYPE ENDOPEPTIDASE/ SERINE-TYPE PEPTIDASE
AT4G34620

Predicted

pull down

FSW = 0.0412

Unknown

SSR16 (SMALL SUBUNIT RIBOSOMAL PROTEIN 16) STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G25140

Predicted

interologs mapping

synthetic growth defect

FSW = 0.0062

Unknown

CLPB4 (CASEIN LYTIC PROTEINASE B4) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT2G01350

Predicted

pull down

FSW = 0.0043

Unknown

QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE) NICOTINATE-NUCLEOTIDE DIPHOSPHORYLASE (CARBOXYLATING)
AT2G04270

Predicted

pull down

FSW = 0.1158

Unknown

RNEE/G (RNASE E/G-LIKE) ENDORIBONUCLEASE
AT3G17170

Predicted

pull down

FSW = 0.0575

Unknown

RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3) STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G22360

Predicted

pull down

FSW = 0.0959

Unknown

DNAJ HEAT SHOCK FAMILY PROTEIN
AT5G16390

Predicted

pull down

FSW = 0.0170

Unknown

CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1) ACETYL-COA CARBOXYLASE/ BIOTIN BINDING
AT5G49910

Predicted

Shared biological function

Phylogenetic profile method

Co-expression

FSW = 0.0489

Unknown

CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G71810

Predicted

pull down

FSW = 0.0543

Unknown

ABC1 FAMILY PROTEIN
AT1G17220

Predicted

pull down

FSW = 0.1169

Unknown

FUG1 (FU-GAERI1) TRANSLATION INITIATION FACTOR
AT3G44890

Predicted

pull down

FSW = 0.0942

Unknown

RPL9 (RIBOSOMAL PROTEIN L9) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G65410

Predicted

pull down

FSW = 0.0489

Unknown

ATNAP11 (ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 11) TRANSPORTER
AT1G67280

Predicted

pull down

FSW = 0.0462

Unknown

LACTOYLGLUTATHIONE LYASE PUTATIVE / GLYOXALASE I PUTATIVE
AT2G38040

Predicted

pull down

FSW = 0.0563

Unknown

CAC3 ACETYL-COA CARBOXYLASE
AT3G18680

Predicted

pull down

FSW = 0.1461

Unknown

ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN
AT3G29430

Predicted

pull down

FSW = 0.0451

Unknown

GERANYLGERANYL PYROPHOSPHATE SYNTHASE PUTATIVE / GGPP SYNTHETASE PUTATIVE / FARNESYLTRANSTRANSFERASE PUTATIVE
AT4G34350

Predicted

pull down

FSW = 0.0489

Unknown

HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE) 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE REDUCTASE/ 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE
AT5G14100

Predicted

pull down

FSW = 0.0414

Unknown

ATNAP14 TRANSPORTER
AT5G15450

Predicted

blue native page

FSW = 0.0487

Unknown

CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT5G55280

Predicted

pull down

FSW = 0.0338

Unknown

FTSZ1-1 PROTEIN BINDING / STRUCTURAL MOLECULE
AT5G61410

Predicted

pull down

FSW = 0.0233

Unknown

RPE CATALYTIC/ RIBULOSE-PHOSPHATE 3-EPIMERASE
AT5G30510

Predicted

blue native page

FSW = 0.1027

Unknown

RPS1 (RIBOSOMAL PROTEIN S1) RNA BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G05190

Predicted

pull down

FSW = 0.0332

Unknown

EMB2394 (EMBRYO DEFECTIVE 2394) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G24240

Predicted

pull down

FSW = 0.0813

Unknown

RIBOSOMAL PROTEIN L19 FAMILY PROTEIN
AT1G32990

Predicted

pull down

FSW = 0.0948

Unknown

PRPL11 (PLASTID RIBOSOMAL PROTEIN L11) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G74040

Predicted

pull down

FSW = 0.0277

Unknown

IMS1 (2-ISOPROPYLMALATE SYNTHASE 1) 2-ISOPROPYLMALATE SYNTHASE
AT2G17630

Predicted

pull down

FSW = 0.0257

Unknown

PHOSPHOSERINE AMINOTRANSFERASE PUTATIVE
AT2G43030

Predicted

pull down

FSW = 0.0743

Unknown

RIBOSOMAL PROTEIN L3 FAMILY PROTEIN
AT4G13430

Predicted

pull down

FSW = 0.0473

Unknown

IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1) 4 IRON 4 SULFUR CLUSTER BINDING / HYDRO-LYASE/ LYASE
AT5G35360

Predicted

pull down

FSW = 0.0636

Unknown

CAC2 ACETYL-COA CARBOXYLASE/ BIOTIN CARBOXYLASE
AT4G01800

Predicted

pull down

FSW = 0.1305

Unknown

PREPROTEIN TRANSLOCASE SECA SUBUNIT PUTATIVE
AT1G80030

Predicted

Affinity Capture-Western

Co-purification

Reconstituted Complex

FSW = 0.0052

Unknown

DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT3G08840

Predicted

pull down

FSW = 0.0177

Unknown

D-ALANINE--D-ALANINE LIGASE FAMILY
ATCG00180Predicted

pull down

FSW = 0.1301

Unknown

RNA POLYMERASE BETA SUBUNIT-1
ATCG00500Predicted

pull down

FSW = 0.0292

Unknown

ENCODES THE CARBOXYTRANSFERASE BETA SUBUNIT OF THE ACETYL-COA CARBOXYLASE (ACCASE) COMPLEX IN PLASTIDS THIS COMPLEX CATALYZES THE CARBOXYLATION OF ACETYL-COA TO PRODUCE MALONYL-COA THE FIRST COMMITTED STEP IN FATTY ACID SYNTHESIS
ATCG00830Predicted

pull down

FSW = 0.0903

Unknown

ENCODES A CHLOROPLAST RIBOSOMAL PROTEIN L2 A CONSTITUENT OF THE LARGE SUBUNIT OF THE RIBOSOMAL COMPLEX
ATCG00160Predicted

pull down

FSW = 0.1290

Unknown

CHLOROPLAST RIBOSOMAL PROTEIN S2
AT3G48750

Predicted

Affinity Capture-MS

FSW = 0.0033

Unknown

CDC2 (CELL DIVISION CONTROL 2) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE
AT2G36880

Predicted

pull down

FSW = 0.0695

Unknown

MAT3 (METHIONINE ADENOSYLTRANSFERASE 3) COPPER ION BINDING / METHIONINE ADENOSYLTRANSFERASE
AT1G79530

Predicted

pull down

FSW = 0.0144

Unknown

GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1) NAD OR NADH BINDING / BINDING / CATALYTIC/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (PHOSPHORYLATING)/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
AT5G63680

Predicted

pull down

FSW = 0.0229

Unknown

PYRUVATE KINASE PUTATIVE
AT5G52640

Predicted

pull down

FSW = 0.0148

Unknown

ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT5G61510

Predicted

pull down

FSW = 0.0172

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT4G11420

Predicted

Affinity Capture-MS

Co-expression

FSW = 0.0141

Unknown

EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A) TRANSLATION INITIATION FACTOR
AT2G19480

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0060

Unknown

NAP12 (NUCLEOSOME ASSEMBLY PROTEIN 12) DNA BINDING
AT3G22740

Predicted

pull down

FSW = 0.0138

Unknown

HMT3 HOMOCYSTEINE S-METHYLTRANSFERASE
AT1G01710

Predicted

pull down

FSW = 0.0138

Unknown

ACYL-COA THIOESTERASE FAMILY PROTEIN
AT5G44790

Predicted

pull down

FSW = 0.0233

Unknown

RAN1 (RESPONSIVE-TO-ANTAGONIST 1) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / COPPER ION TRANSMEMBRANE TRANSPORTER
AT5G48840

Predicted

pull down

FSW = 0.0081

Unknown

PANC (ARABIDOPSIS HOMOLOG OF BACTERIAL PANC) PANTOATE-BETA-ALANINE LIGASE/ PROTEIN HOMODIMERIZATION
AT5G53350

Predicted

pull down

FSW = 0.0790

Unknown

CLPX ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT2G30920

Predicted

pull down

FSW = 0.0446

Unknown

ATCOQ3 (ARABDIOPSIS THALIANA COENZYME Q 3) HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE/ POLYPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE
AT4G26840

Predicted

Affinity Capture-MS

FSW = 0.0158

Unknown

SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG
AT3G23580

Predicted

pull down

FSW = 0.0163

Unknown

RNR2A (RIBONUCLEOTIDE REDUCTASE 2A) RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE
AT3G55630

Predicted

pull down

FSW = 0.0277

Unknown

ATDFD (A THALIANA DHFS-FPGS HOMOLOG D) TETRAHYDROFOLYLPOLYGLUTAMATE SYNTHASE
AT5G40760

Predicted

pull down

FSW = 0.0054

Unknown

G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6) GLUCOSE-6-PHOSPHATE DEHYDROGENASE
AT2G18230

Predicted

pull down

FSW = 0.0340

Unknown

ATPPA2 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 2) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT1G71920

Predicted

pull down

FSW = 0.0252

Unknown

HISTIDINOL-PHOSPHATE AMINOTRANSFERASE PUTATIVE
AT2G20060

Predicted

pull down

FSW = 0.1299

Unknown

RIBOSOMAL PROTEIN L4 FAMILY PROTEIN
AT4G11280

Predicted

pull down

FSW = 0.0154

Unknown

ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6) 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE
AT1G05900

Predicted

pull down

FSW = 0.0376

Unknown

ENDONUCLEASE-RELATED
AT1G17850Predicted

pull down

FSW = 0.0543

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CHLOROPLAST EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S RHODANESE-LIKE (INTERPROIPR001763) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN (TAIRAT2G407601) HAS 3833 BLAST HITS TO 3832 PROTEINS IN 847 SPECIES ARCHAE - 0 BACTERIA - 1695 METAZOA - 46 FUNGI - 2 PLANTS - 52 VIRUSES - 0 OTHER EUKARYOTES - 2038 (SOURCE NCBI BLINK)
AT1G23010

Predicted

pull down

FSW = 0.0207

Unknown

LPR1 (LOW PHOSPHATE ROOT1) COPPER ION BINDING / OXIDOREDUCTASE ACTING ON DIPHENOLS AND RELATED SUBSTANCES AS DONORS OXYGEN AS ACCEPTOR
AT1G54870

Predicted

pull down

FSW = 0.0113

Unknown

BINDING / CATALYTIC/ OXIDOREDUCTASE
AT1G63680

Predicted

pull down

FSW = 0.0213

Unknown

MURE ATP BINDING / ACID-AMINO ACID LIGASE/ LIGASE
AT2G25870

Predicted

pull down

FSW = 0.0689

Unknown

HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN
AT2G43360

Predicted

pull down

FSW = 0.0030

Unknown

BIO2 (BIOTIN AUXOTROPH 2) BIOTIN SYNTHASE
AT2G47020

Predicted

pull down

FSW = 0.0233

Unknown

PEPTIDE CHAIN RELEASE FACTOR PUTATIVE
AT3G17760

Predicted

pull down

FSW = 0.0505

Unknown

GAD5 (GLUTAMATE DECARBOXYLASE 5) CALMODULIN BINDING
AT3G21230

Predicted

pull down

FSW = 0.0083

Unknown

4CL5 (4-COUMARATECOA LIGASE 5) 4-COUMARATE-COA LIGASE
AT3G23490

Predicted

pull down

FSW = 0.0248

Unknown

CYN (CYANASE) DNA BINDING / CYANATE HYDRATASE/ HYDRO-LYASE
AT3G44600

Predicted

pull down

FSW = 0.0271

Unknown

CYP71 (CYCLOPHILIN71) CHROMATIN BINDING / HISTONE BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT4G09140

Predicted

pull down

FSW = 0.0379

Unknown

MLH1 (MUTL-HOMOLOGUE 1) PROTEIN BINDING BRIDGING
AT4G12740

Predicted

pull down

FSW = 0.0271

Unknown

ADENINE-DNA GLYCOSYLASE-RELATED / MYH-RELATED
AT4G26780

Predicted

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

pull down

Affinity Capture-Western

Co-purification

interologs mapping

Reconstituted Complex

FSW = 0.1814

Unknown

AR192 ADENYL-NUCLEOTIDE EXCHANGE FACTOR/ CHAPERONE BINDING / PROTEIN BINDING / PROTEIN HOMODIMERIZATION
AT5G01300

Predicted

pull down

FSW = 0.0279

Unknown

PHOSPHATIDYLETHANOLAMINE-BINDING FAMILY PROTEIN
AT5G08415

Predicted

pull down

FSW = 0.0163

Unknown

LIPOIC ACID SYNTHASE FAMILY PROTEIN
AT5G10240

Predicted

pull down

FSW = 0.0081

Unknown

ASN3 (ASPARAGINE SYNTHETASE 3) ASPARAGINE SYNTHASE (GLUTAMINE-HYDROLYZING)
AT5G15140

Predicted

pull down

FSW = 0.0079

Unknown

ALDOSE 1-EPIMERASE FAMILY PROTEIN
AT5G16080

Predicted

pull down

FSW = 0.0166

Unknown

ATCXE17 (ARABIDOPSIS THALIANA CARBOXYESTERASE 17) HYDROLASE
AT5G51930

Predicted

pull down

FSW = 0.0168

Unknown

GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN
AT5G51970

Predicted

pull down

FSW = 0.0292

Unknown

SORBITOL DEHYDROGENASE PUTATIVE / L-IDITOL 2-DEHYDROGENASE PUTATIVE
AT5G55000

Predicted

pull down

FSW = 0.0173

Unknown

FIP2 PROTEIN BINDING / VOLTAGE-GATED POTASSIUM CHANNEL
AT5G55130

Predicted

pull down

FSW = 0.0033

Unknown

CNX5 (CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 5) MO-MOLYBDOPTERIN COFACTOR SULFURASE
AT5G23230

Predicted

pull down

FSW = 0.0790

Unknown

NIC2 (NICOTINAMIDASE 2) CATALYTIC/ NICOTINAMIDASE
AT3G54250

Predicted

two hybrid

Affinity Capture-Western

in vivo

FSW = 0.0252

Unknown

MEVALONATE DIPHOSPHATE DECARBOXYLASE PUTATIVE
AT3G59630

Predicted

Affinity Capture-MS

FSW = 0.0305

Unknown

DIPHTHAMIDE SYNTHESIS DPH2 FAMILY PROTEIN
AT5G02530

Predicted

Affinity Capture-MS

FSW = 0.0024

Unknown

RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE

Downloads

Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454