Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G37910 - ( mtHsc70-1 (mitochondrial heat shock protein 70-1) ATP binding )
126 Proteins interacs with AT4G37910Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT5G22290 | Experimentalpull down | FSW = 0.0036
| Class B:vacuolenucleusmitochondrioncytosol | ANAC089 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 89) TRANSCRIPTION FACTOR |
AT3G01280 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0014
| Class C:vacuolemitochondrion | VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1) VOLTAGE-GATED ANION CHANNEL |
AT4G24190 | Predictedin vivoin vitroAffinity Capture-MS | FSW = 0.0271
| Class C:vacuolemitochondrion | SHD (SHEPHERD) ATP BINDING / UNFOLDED PROTEIN BINDING |
AT2G33210 | Predictedpull down | FSW = 0.2022
| Class C:vacuolemitochondrion | HSP60-2 (HEAT SHOCK PROTEIN 60-2) ATP BINDING |
AT5G09590 | PredictedShared biological functionGene fusion methodPhylogenetic profile methodCo-expression | FSW = 0.0366
| Class C:vacuolemitochondrion | MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING |
AT4G09320 | Predictedpull down | FSW = 0.0103
| Class C:vacuole | NDPK1 ATP BINDING / NUCLEOSIDE DIPHOSPHATE KINASE |
AT1G78380 | Predictedpull down | FSW = 0.0361
| Class C:vacuole | ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19) GLUTATHIONE BINDING / GLUTATHIONE TRANSFERASE |
AT2G36530 | PredictedAffinity Capture-MSpull downAffinity Capture-MS | FSW = 0.0331
| Class C:vacuole | LOS2 COPPER ION BINDING / PHOSPHOPYRUVATE HYDRATASE |
AT1G67940 | Predictedpull down | FSW = 0.0407
| Class C:vacuole | ATNAP3 TRANSPORTER |
AT1G53000 | Predictedpull down | FSW = 0.0860
| Class C:mitochondrion | CYTIDYLYLTRANSFERASE FAMILY |
AT4G24280 | PredictedShared biological functionGene neighbors methodPhylogenetic profile methodCo-expression | FSW = 0.0277
| Class C:mitochondrion | CPHSC70-1 (CHLOROPLAST HEAT SHOCK PROTEIN 70-1) ATP BINDING |
AT5G20720 | Predictedpull down | FSW = 0.0427
| Class C:mitochondrion | CPN20 (CHAPERONIN 20) CALMODULIN BINDING |
AT2G21170 | Predictedpull down | FSW = 0.0303
| Class C:mitochondrion | TIM (TRIOSEPHOSPHATE ISOMERASE) CATALYTIC/ TRIOSE-PHOSPHATE ISOMERASE |
AT4G33760 | Predictedcomigration in non denaturing gel electrophoresis | FSW = 0.0399
| Class C:mitochondrion | TRNA SYNTHETASE CLASS II (D K AND N) FAMILY PROTEIN |
AT3G10690 | Predictedpull down | FSW = 0.0822
| Class C:mitochondrion | DNA GYRASE SUBUNIT A FAMILY PROTEIN |
AT5G23140 | Predictedpull down | FSW = 0.1705
| Class C:mitochondrion | NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7) SERINE-TYPE ENDOPEPTIDASE |
AT1G56190 | Predictedpull down | FSW = 0.0486
| Class C:mitochondrion | PHOSPHOGLYCERATE KINASE PUTATIVE |
AT2G04842 | Predictedpull down | FSW = 0.0948
| Class C:mitochondrion | EMB2761 (EMBRYO DEFECTIVE 2761) ATP BINDING / AMINOACYL-TRNA LIGASE/ LIGASE FORMING AMINOACYL-TRNA AND RELATED COMPOUNDS / NUCLEOTIDE BINDING / THREONINE-TRNA LIGASE |
AT3G02660 | Predictedpull down | FSW = 0.0271
| Class C:mitochondrion | EMB2768 (EMBRYO DEFECTIVE 2768) ATP BINDING / RNA BINDING / AMINOACYL-TRNA LIGASE/ NUCLEOTIDE BINDING / TYROSINE-TRNA LIGASE |
AT5G22800 | Predictedpull down | FSW = 0.0414
| Class C:mitochondrion | EMB1030 (EMBRYO DEFECTIVE 1030) ATP BINDING / ALANINE-TRNA LIGASE/ LIGASE FORMING AMINOACYL-TRNA AND RELATED COMPOUNDS / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING |
AT5G52520 | Predictedpull down | FSW = 0.0170
| Class C:mitochondrion | OVA6 (OVULE ABORTION 6) ATP BINDING / AMINOACYL-TRNA LIGASE/ NUCLEOTIDE BINDING / PROLINE-TRNA LIGASE |
AT2G43750 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0095
| Class C:mitochondrion | OASB (O-ACETYLSERINE (THIOL) LYASE B) CYSTEINE SYNTHASE |
AT2G04540 | Predictedpull down | FSW = 0.0155
| Class C:mitochondrion | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) SYNTHASE II PUTATIVE |
AT1G50940 | Predictedpull down | FSW = 0.0376
| Class C:mitochondrion | ETFALPHA (ELECTRON TRANSFER FLAVOPROTEIN ALPHA) FAD BINDING / ELECTRON CARRIER |
AT3G54826 | PredictedAffinity Capture-Westerninterologs mapping | FSW = 0.0231
| Class C:mitochondrion | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN CONTAINS INTERPRO DOMAIN/S ZINC FINGER ZIM17-TYPE (INTERPROIPR007853) HAS 284 BLAST HITS TO 284 PROTEINS IN 134 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 100 FUNGI - 79 PLANTS - 58 VIRUSES - 0 OTHER EUKARYOTES - 47 (SOURCE NCBI BLINK) |
AT4G02580 | Predictedpull down | FSW = 0.0154
| Class C:mitochondrion | NADH-UBIQUINONE OXIDOREDUCTASE 24 KDA SUBUNIT PUTATIVE |
AT4G02930 | Predictedpull down | FSW = 0.1803
| Class C:mitochondrion | ELONGATION FACTOR TU PUTATIVE / EF-TU PUTATIVE |
AT4G11060 | Predictedpull down | FSW = 0.1207
| Class C:mitochondrion | MTSSB (MITOCHONDRIALLY TARGETED SINGLE-STRANDED DNA BINDING PROTEIN) SINGLE-STRANDED DNA BINDING |
AT5G43430 | Predictedpull down | FSW = 0.0290
| Class C:mitochondrion | ETFBETA ELECTRON CARRIER |
AT5G26860 | Predictedpull down | FSW = 0.0959
| Class C:mitochondrion | LON1 (LON PROTEASE 1) ATP BINDING / ATP-DEPENDENT PEPTIDASE/ SERINE-TYPE PEPTIDASE |
AT2G20510 | PredictedReconstituted Complexinterologs mappingAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-MSAffinity Capture-WesternCo-purificationReconstituted ComplexSynthetic Lethalitytwo hybrid | FSW = 0.0204
| Class C:mitochondrion | ATTIM44-1 PROTEIN-TRANSMEMBRANE TRANSPORTING ATPASE |
AT2G47510 | Predictedpull down | FSW = 0.0118
| Class C:mitochondrion | FUM1 (FUMARASE 1) CATALYTIC/ FUMARATE HYDRATASE |
AT5G65720 | Predictedpull down | FSW = 0.0056
| Class C:mitochondrion | NFS1 ATP BINDING / CYSTEINE DESULFURASE/ TRANSAMINASE |
AT1G17530 | PredictedAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-MSAffinity Capture-MSAffinity Capture-WesternCo-purificationsynthetic growth defect | FSW = 0.0472
| Class C:mitochondrion | ATTIM23-1 (TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23) P-P-BOND-HYDROLYSIS-DRIVEN PROTEIN TRANSMEMBRANE TRANSPORTER |
AT1G20350 | PredictedAffinity Capture-WesternAffinity Capture-Westerninterologs mappingSynthetic Lethality | FSW = 0.0505
| Class C:mitochondrion | ATTIM17-1 P-P-BOND-HYDROLYSIS-DRIVEN PROTEIN TRANSMEMBRANE TRANSPORTER/ PROTEIN TRANSPORTER |
AT5G56730 | Predictedpull down | FSW = 0.0079
| Unknown | PEPTIDASE M16 FAMILY PROTEIN / INSULINASE FAMILY PROTEIN |
AT3G12290 | Predictedpull down | FSW = 0.0308
| Unknown | TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE PUTATIVE |
AT1G74710 | Predictedpull down | FSW = 0.0054
| Unknown | ISOCHORISMATE SYNTHASE 1 (ICS1) / ISOCHORISMATE MUTASE |
AT3G27925 | Predictedpull down | FSW = 0.0489
| Unknown | DEGP1 (DEGP PROTEASE 1) SERINE-TYPE ENDOPEPTIDASE/ SERINE-TYPE PEPTIDASE |
AT4G34620 | Predictedpull down | FSW = 0.0412
| Unknown | SSR16 (SMALL SUBUNIT RIBOSOMAL PROTEIN 16) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT2G25140 | Predictedinterologs mappingsynthetic growth defect | FSW = 0.0062
| Unknown | CLPB4 (CASEIN LYTIC PROTEINASE B4) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING |
AT2G01350 | Predictedpull down | FSW = 0.0043
| Unknown | QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE) NICOTINATE-NUCLEOTIDE DIPHOSPHORYLASE (CARBOXYLATING) |
AT2G04270 | Predictedpull down | FSW = 0.1158
| Unknown | RNEE/G (RNASE E/G-LIKE) ENDORIBONUCLEASE |
AT3G17170 | Predictedpull down | FSW = 0.0575
| Unknown | RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT2G22360 | Predictedpull down | FSW = 0.0959
| Unknown | DNAJ HEAT SHOCK FAMILY PROTEIN |
AT5G16390 | Predictedpull down | FSW = 0.0170
| Unknown | CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1) ACETYL-COA CARBOXYLASE/ BIOTIN BINDING |
AT5G49910 | PredictedShared biological functionPhylogenetic profile methodCo-expression | FSW = 0.0489
| Unknown | CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2) ATP BINDING / UNFOLDED PROTEIN BINDING |
AT1G71810 | Predictedpull down | FSW = 0.0543
| Unknown | ABC1 FAMILY PROTEIN |
AT1G17220 | Predictedpull down | FSW = 0.1169
| Unknown | FUG1 (FU-GAERI1) TRANSLATION INITIATION FACTOR |
AT3G44890 | Predictedpull down | FSW = 0.0942
| Unknown | RPL9 (RIBOSOMAL PROTEIN L9) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT1G65410 | Predictedpull down | FSW = 0.0489
| Unknown | ATNAP11 (ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 11) TRANSPORTER |
AT1G67280 | Predictedpull down | FSW = 0.0462
| Unknown | LACTOYLGLUTATHIONE LYASE PUTATIVE / GLYOXALASE I PUTATIVE |
AT2G38040 | Predictedpull down | FSW = 0.0563
| Unknown | CAC3 ACETYL-COA CARBOXYLASE |
AT3G18680 | Predictedpull down | FSW = 0.1461
| Unknown | ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN |
AT3G29430 | Predictedpull down | FSW = 0.0451
| Unknown | GERANYLGERANYL PYROPHOSPHATE SYNTHASE PUTATIVE / GGPP SYNTHETASE PUTATIVE / FARNESYLTRANSTRANSFERASE PUTATIVE |
AT4G34350 | Predictedpull down | FSW = 0.0489
| Unknown | HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE) 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE REDUCTASE/ 4-HYDROXY-3-METHYLBUT-2-EN-1-YL DIPHOSPHATE SYNTHASE |
AT5G14100 | Predictedpull down | FSW = 0.0414
| Unknown | ATNAP14 TRANSPORTER |
AT5G15450 | Predictedblue native page | FSW = 0.0487
| Unknown | CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING |
AT5G55280 | Predictedpull down | FSW = 0.0338
| Unknown | FTSZ1-1 PROTEIN BINDING / STRUCTURAL MOLECULE |
AT5G61410 | Predictedpull down | FSW = 0.0233
| Unknown | RPE CATALYTIC/ RIBULOSE-PHOSPHATE 3-EPIMERASE |
AT5G30510 | Predictedblue native page | FSW = 0.1027
| Unknown | RPS1 (RIBOSOMAL PROTEIN S1) RNA BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME |
AT1G05190 | Predictedpull down | FSW = 0.0332
| Unknown | EMB2394 (EMBRYO DEFECTIVE 2394) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT1G24240 | Predictedpull down | FSW = 0.0813
| Unknown | RIBOSOMAL PROTEIN L19 FAMILY PROTEIN |
AT1G32990 | Predictedpull down | FSW = 0.0948
| Unknown | PRPL11 (PLASTID RIBOSOMAL PROTEIN L11) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT1G74040 | Predictedpull down | FSW = 0.0277
| Unknown | IMS1 (2-ISOPROPYLMALATE SYNTHASE 1) 2-ISOPROPYLMALATE SYNTHASE |
AT2G17630 | Predictedpull down | FSW = 0.0257
| Unknown | PHOSPHOSERINE AMINOTRANSFERASE PUTATIVE |
AT2G43030 | Predictedpull down | FSW = 0.0743
| Unknown | RIBOSOMAL PROTEIN L3 FAMILY PROTEIN |
AT4G13430 | Predictedpull down | FSW = 0.0473
| Unknown | IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1) 4 IRON 4 SULFUR CLUSTER BINDING / HYDRO-LYASE/ LYASE |
AT5G35360 | Predictedpull down | FSW = 0.0636
| Unknown | CAC2 ACETYL-COA CARBOXYLASE/ BIOTIN CARBOXYLASE |
AT4G01800 | Predictedpull down | FSW = 0.1305
| Unknown | PREPROTEIN TRANSLOCASE SECA SUBUNIT PUTATIVE |
AT1G80030 | PredictedAffinity Capture-WesternCo-purificationReconstituted Complex | FSW = 0.0052
| Unknown | DNAJ HEAT SHOCK PROTEIN PUTATIVE |
AT3G08840 | Predictedpull down | FSW = 0.0177
| Unknown | D-ALANINE--D-ALANINE LIGASE FAMILY |
ATCG00180 | Predictedpull down | FSW = 0.1301
| Unknown | RNA POLYMERASE BETA SUBUNIT-1 |
ATCG00500 | Predictedpull down | FSW = 0.0292
| Unknown | ENCODES THE CARBOXYTRANSFERASE BETA SUBUNIT OF THE ACETYL-COA CARBOXYLASE (ACCASE) COMPLEX IN PLASTIDS THIS COMPLEX CATALYZES THE CARBOXYLATION OF ACETYL-COA TO PRODUCE MALONYL-COA THE FIRST COMMITTED STEP IN FATTY ACID SYNTHESIS |
ATCG00830 | Predictedpull down | FSW = 0.0903
| Unknown | ENCODES A CHLOROPLAST RIBOSOMAL PROTEIN L2 A CONSTITUENT OF THE LARGE SUBUNIT OF THE RIBOSOMAL COMPLEX |
ATCG00160 | Predictedpull down | FSW = 0.1290
| Unknown | CHLOROPLAST RIBOSOMAL PROTEIN S2 |
AT3G48750 | PredictedAffinity Capture-MS | FSW = 0.0033
| Unknown | CDC2 (CELL DIVISION CONTROL 2) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE |
AT2G36880 | Predictedpull down | FSW = 0.0695
| Unknown | MAT3 (METHIONINE ADENOSYLTRANSFERASE 3) COPPER ION BINDING / METHIONINE ADENOSYLTRANSFERASE |
AT1G79530 | Predictedpull down | FSW = 0.0144
| Unknown | GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1) NAD OR NADH BINDING / BINDING / CATALYTIC/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (PHOSPHORYLATING)/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE |
AT5G63680 | Predictedpull down | FSW = 0.0229
| Unknown | PYRUVATE KINASE PUTATIVE |
AT5G52640 | Predictedpull down | FSW = 0.0148
| Unknown | ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING |
AT5G61510 | Predictedpull down | FSW = 0.0172
| Unknown | NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE |
AT4G11420 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0141
| Unknown | EIF3A (EUKARYOTIC TRANSLATION INITIATION FACTOR 3A) TRANSLATION INITIATION FACTOR |
AT2G19480 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0060
| Unknown | NAP12 (NUCLEOSOME ASSEMBLY PROTEIN 12) DNA BINDING |
AT3G22740 | Predictedpull down | FSW = 0.0138
| Unknown | HMT3 HOMOCYSTEINE S-METHYLTRANSFERASE |
AT1G01710 | Predictedpull down | FSW = 0.0138
| Unknown | ACYL-COA THIOESTERASE FAMILY PROTEIN |
AT5G44790 | Predictedpull down | FSW = 0.0233
| Unknown | RAN1 (RESPONSIVE-TO-ANTAGONIST 1) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / COPPER ION TRANSMEMBRANE TRANSPORTER |
AT5G48840 | Predictedpull down | FSW = 0.0081
| Unknown | PANC (ARABIDOPSIS HOMOLOG OF BACTERIAL PANC) PANTOATE-BETA-ALANINE LIGASE/ PROTEIN HOMODIMERIZATION |
AT5G53350 | Predictedpull down | FSW = 0.0790
| Unknown | CLPX ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING |
AT2G30920 | Predictedpull down | FSW = 0.0446
| Unknown | ATCOQ3 (ARABDIOPSIS THALIANA COENZYME Q 3) HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE/ POLYPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE |
AT4G26840 | PredictedAffinity Capture-MS | FSW = 0.0158
| Unknown | SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG |
AT3G23580 | Predictedpull down | FSW = 0.0163
| Unknown | RNR2A (RIBONUCLEOTIDE REDUCTASE 2A) RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE |
AT3G55630 | Predictedpull down | FSW = 0.0277
| Unknown | ATDFD (A THALIANA DHFS-FPGS HOMOLOG D) TETRAHYDROFOLYLPOLYGLUTAMATE SYNTHASE |
AT5G40760 | Predictedpull down | FSW = 0.0054
| Unknown | G6PD6 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6) GLUCOSE-6-PHOSPHATE DEHYDROGENASE |
AT2G18230 | Predictedpull down | FSW = 0.0340
| Unknown | ATPPA2 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 2) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE |
AT1G71920 | Predictedpull down | FSW = 0.0252
| Unknown | HISTIDINOL-PHOSPHATE AMINOTRANSFERASE PUTATIVE |
AT2G20060 | Predictedpull down | FSW = 0.1299
| Unknown | RIBOSOMAL PROTEIN L4 FAMILY PROTEIN |
AT4G11280 | Predictedpull down | FSW = 0.0154
| Unknown | ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6) 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE |
AT1G05900 | Predictedpull down | FSW = 0.0376
| Unknown | ENDONUCLEASE-RELATED |
AT1G17850 | Predictedpull down | FSW = 0.0543
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CHLOROPLAST EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S RHODANESE-LIKE (INTERPROIPR001763) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN (TAIRAT2G407601) HAS 3833 BLAST HITS TO 3832 PROTEINS IN 847 SPECIES ARCHAE - 0 BACTERIA - 1695 METAZOA - 46 FUNGI - 2 PLANTS - 52 VIRUSES - 0 OTHER EUKARYOTES - 2038 (SOURCE NCBI BLINK) |
AT1G23010 | Predictedpull down | FSW = 0.0207
| Unknown | LPR1 (LOW PHOSPHATE ROOT1) COPPER ION BINDING / OXIDOREDUCTASE ACTING ON DIPHENOLS AND RELATED SUBSTANCES AS DONORS OXYGEN AS ACCEPTOR |
AT1G54870 | Predictedpull down | FSW = 0.0113
| Unknown | BINDING / CATALYTIC/ OXIDOREDUCTASE |
AT1G63680 | Predictedpull down | FSW = 0.0213
| Unknown | MURE ATP BINDING / ACID-AMINO ACID LIGASE/ LIGASE |
AT2G25870 | Predictedpull down | FSW = 0.0689
| Unknown | HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN |
AT2G43360 | Predictedpull down | FSW = 0.0030
| Unknown | BIO2 (BIOTIN AUXOTROPH 2) BIOTIN SYNTHASE |
AT2G47020 | Predictedpull down | FSW = 0.0233
| Unknown | PEPTIDE CHAIN RELEASE FACTOR PUTATIVE |
AT3G17760 | Predictedpull down | FSW = 0.0505
| Unknown | GAD5 (GLUTAMATE DECARBOXYLASE 5) CALMODULIN BINDING |
AT3G21230 | Predictedpull down | FSW = 0.0083
| Unknown | 4CL5 (4-COUMARATECOA LIGASE 5) 4-COUMARATE-COA LIGASE |
AT3G23490 | Predictedpull down | FSW = 0.0248
| Unknown | CYN (CYANASE) DNA BINDING / CYANATE HYDRATASE/ HYDRO-LYASE |
AT3G44600 | Predictedpull down | FSW = 0.0271
| Unknown | CYP71 (CYCLOPHILIN71) CHROMATIN BINDING / HISTONE BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
AT4G09140 | Predictedpull down | FSW = 0.0379
| Unknown | MLH1 (MUTL-HOMOLOGUE 1) PROTEIN BINDING BRIDGING |
AT4G12740 | Predictedpull down | FSW = 0.0271
| Unknown | ADENINE-DNA GLYCOSYLASE-RELATED / MYH-RELATED |
AT4G26780 | PredictedAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-Westernpull downAffinity Capture-WesternCo-purificationinterologs mappingReconstituted Complex | FSW = 0.1814
| Unknown | AR192 ADENYL-NUCLEOTIDE EXCHANGE FACTOR/ CHAPERONE BINDING / PROTEIN BINDING / PROTEIN HOMODIMERIZATION |
AT5G01300 | Predictedpull down | FSW = 0.0279
| Unknown | PHOSPHATIDYLETHANOLAMINE-BINDING FAMILY PROTEIN |
AT5G08415 | Predictedpull down | FSW = 0.0163
| Unknown | LIPOIC ACID SYNTHASE FAMILY PROTEIN |
AT5G10240 | Predictedpull down | FSW = 0.0081
| Unknown | ASN3 (ASPARAGINE SYNTHETASE 3) ASPARAGINE SYNTHASE (GLUTAMINE-HYDROLYZING) |
AT5G15140 | Predictedpull down | FSW = 0.0079
| Unknown | ALDOSE 1-EPIMERASE FAMILY PROTEIN |
AT5G16080 | Predictedpull down | FSW = 0.0166
| Unknown | ATCXE17 (ARABIDOPSIS THALIANA CARBOXYESTERASE 17) HYDROLASE |
AT5G51930 | Predictedpull down | FSW = 0.0168
| Unknown | GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN |
AT5G51970 | Predictedpull down | FSW = 0.0292
| Unknown | SORBITOL DEHYDROGENASE PUTATIVE / L-IDITOL 2-DEHYDROGENASE PUTATIVE |
AT5G55000 | Predictedpull down | FSW = 0.0173
| Unknown | FIP2 PROTEIN BINDING / VOLTAGE-GATED POTASSIUM CHANNEL |
AT5G55130 | Predictedpull down | FSW = 0.0033
| Unknown | CNX5 (CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 5) MO-MOLYBDOPTERIN COFACTOR SULFURASE |
AT5G23230 | Predictedpull down | FSW = 0.0790
| Unknown | NIC2 (NICOTINAMIDASE 2) CATALYTIC/ NICOTINAMIDASE |
AT3G54250 | Predictedtwo hybridAffinity Capture-Westernin vivo | FSW = 0.0252
| Unknown | MEVALONATE DIPHOSPHATE DECARBOXYLASE PUTATIVE |
AT3G59630 | PredictedAffinity Capture-MS | FSW = 0.0305
| Unknown | DIPHTHAMIDE SYNTHESIS DPH2 FAMILY PROTEIN |
AT5G02530 | PredictedAffinity Capture-MS | FSW = 0.0024
| Unknown | RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454