Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G26840 - ( SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) protein binding / protein tag )
250 Proteins interacs with AT4G26840Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT5G67500 | PredictedAffinity Capture-MS | FSW = 0.0255
| Unknown | VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2) VOLTAGE-GATED ANION CHANNEL |
AT4G14960 | PredictedAffinity Capture-MS | FSW = 0.0174
| Unknown | TUA6 STRUCTURAL CONSTITUENT OF CYTOSKELETON |
AT3G04920 | PredictedAffinity Capture-MS | FSW = 0.0713
| Unknown | 40S RIBOSOMAL PROTEIN S24 (RPS24A) |
AT5G50370 | PredictedAffinity Capture-MS | FSW = 0.0089
| Unknown | ADENYLATE KINASE PUTATIVE |
AT5G63400 | PredictedAffinity Capture-MS | FSW = 0.0097
| Unknown | ADK1 (ADENYLATE KINASE 1) ATP BINDING / ADENYLATE KINASE/ NUCLEOBASE NUCLEOSIDE NUCLEOTIDE KINASE/ NUCLEOTIDE KINASE/ PHOSPHOTRANSFERASE PHOSPHATE GROUP AS ACCEPTOR |
AT1G20010 | PredictedAffinity Capture-MS | FSW = 0.0088
| Unknown | TUB5 STRUCTURAL CONSTITUENT OF CYTOSKELETON |
AT1G49240 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0119
| Unknown | ACT8 (ACTIN 8) COPPER ION BINDING / STRUCTURAL CONSTITUENT OF CYTOSKELETON |
AT1G07920 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0244
| Unknown | ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA |
AT3G25520 | PredictedAffinity Capture-MS | FSW = 0.0102
| Unknown | ATL5 (A THALIANA RIBOSOMAL PROTEIN L5) 5S RRNA BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME |
AT3G05590 | PredictedAffinity Capture-MS | FSW = 0.0053
| Unknown | RPL18 (RIBOSOMAL PROTEIN L18) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT3G09630 | PredictedAffinity Capture-MS | FSW = 0.0436
| Unknown | 60S RIBOSOMAL PROTEIN L4/L1 (RPL4A) |
AT2G33210 | PredictedAffinity Capture-MS | FSW = 0.0030
| Unknown | HSP60-2 (HEAT SHOCK PROTEIN 60-2) ATP BINDING |
AT1G76030 | PredictedAffinity Capture-MS | FSW = 0.0125
| Unknown | VACUOLAR ATP SYNTHASE SUBUNIT B / V-ATPASE B SUBUNIT / VACUOLAR PROTON PUMP B SUBUNIT / V-ATPASE 57 KDA SUBUNIT |
AT2G31610 | PredictedAffinity Capture-MS | FSW = 0.0137
| Unknown | 40S RIBOSOMAL PROTEIN S3 (RPS3A) |
AT2G01250 | PredictedAffinity Capture-MS | FSW = 0.0096
| Unknown | 60S RIBOSOMAL PROTEIN L7 (RPL7B) |
AT2G17360 | PredictedAffinity Capture-MS | FSW = 0.0377
| Unknown | 40S RIBOSOMAL PROTEIN S4 (RPS4A) |
AT1G04820 | PredictedAffinity Capture-MS | FSW = 0.0187
| Unknown | TUA4 STRUCTURAL CONSTITUENT OF CYTOSKELETON |
AT5G19320 | PredictedAffinity Capture-MSin vivoCo-expression | FSW = 0.0137
| Unknown | RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2) RAN GTPASE ACTIVATOR |
AT5G15200 | PredictedAffinity Capture-MS | FSW = 0.0505
| Unknown | 40S RIBOSOMAL PROTEIN S9 (RPS9B) |
AT5G09590 | PredictedAffinity Capture-MS | FSW = 0.0123
| Unknown | MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING |
AT1G20260 | PredictedAffinity Capture-MS | FSW = 0.0048
| Unknown | HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM |
AT2G36530 | PredictedAffinity Capture-MS | FSW = 0.0139
| Unknown | LOS2 COPPER ION BINDING / PHOSPHOPYRUVATE HYDRATASE |
AT1G56070 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0237
| Unknown | LOS1 COPPER ION BINDING / TRANSLATION ELONGATION FACTOR/ TRANSLATION FACTOR NUCLEIC ACID BINDING |
AT1G43170 | PredictedAffinity Capture-MS | FSW = 0.0024
| Unknown | ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT3G12580 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0150
| Unknown | HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING |
AT1G22780 | PredictedAffinity Capture-MS | FSW = 0.0052
| Unknown | PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME |
AT1G54270 | PredictedAffinity Capture-MS | FSW = 0.0152
| Unknown | EIF4A-2 ATP-DEPENDENT HELICASE/ TRANSLATION INITIATION FACTOR |
AT2G37270 | PredictedAffinity Capture-MS | FSW = 0.0595
| Unknown | ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT3G23990 | PredictedAffinity Capture-MS | FSW = 0.0106
| Unknown | HSP60 (HEAT SHOCK PROTEIN 60) ATP BINDING |
AT4G37910 | PredictedAffinity Capture-MS | FSW = 0.0158
| Unknown | MTHSC70-1 (MITOCHONDRIAL HEAT SHOCK PROTEIN 70-1) ATP BINDING |
AT1G34030 | PredictedAffinity Capture-MS | FSW = 0.0244
| Unknown | 40S RIBOSOMAL PROTEIN S18 (RPS18B) |
AT4G37190 | Predictedtwo hybridinteraction prediction | FSW = 0.0042
| Unknown | INVOLVED IN PROTEIN POLYMERIZATION LOCATED IN CYTOSOL PLASMA MEMBRANE EXPRESSED IN 20 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S BETA TUBULIN AUTOREGULATION BINDING SITE (INTERPROIPR013838) TUBULIN/FTSZ GTPASE (INTERPROIPR003008) HAS 251 BLAST HITS TO 250 PROTEINS IN 111 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 122 FUNGI - 89 PLANTS - 28 VIRUSES - 0 OTHER EUKARYOTES - 12 (SOURCE NCBI BLINK) |
AT3G22110 | PredictedAffinity Capture-MS | FSW = 0.0237
| Unknown | PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE |
AT1G11910 | PredictedAffinity Capture-MS | FSW = 0.0055
| Unknown | ASPARTYL PROTEASE FAMILY PROTEIN |
AT1G13440 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0309
| Unknown | GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2) NAD OR NADH BINDING / BINDING / CATALYTIC/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (PHOSPHORYLATING)/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE |
AT3G60770 | PredictedAffinity Capture-MS | FSW = 0.0081
| Unknown | 40S RIBOSOMAL PROTEIN S13 (RPS13A) |
AT1G77590 | PredictedAffinity Capture-MS | FSW = 0.0051
| Unknown | LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9) LONG-CHAIN-FATTY-ACID-COA LIGASE |
AT4G37930 | PredictedAffinity Capture-MS | FSW = 0.0187
| Unknown | SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1) GLYCINE HYDROXYMETHYLTRANSFERASE/ POLY(U) BINDING |
AT1G72370 | PredictedAffinity Capture-MS | FSW = 0.0279
| Unknown | P40 STRUCTURAL CONSTITUENT OF RIBOSOME |
AT5G20290 | PredictedAffinity Capture-MS | FSW = 0.0608
| Unknown | 40S RIBOSOMAL PROTEIN S8 (RPS8A) |
AT3G63130 | PredictedAffinity Capture-MS | FSW = 0.0035
| Unknown | RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1) RAN GTPASE ACTIVATOR/ PROTEIN BINDING |
AT1G09590 | PredictedAffinity Capture-MS | FSW = 0.0109
| Unknown | 60S RIBOSOMAL PROTEIN L21 (RPL21A) |
AT1G16030 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0184
| Unknown | HSP70B (HEAT SHOCK PROTEIN 70B) ATP BINDING |
AT3G12780 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0312
| Unknown | PGK1 (PHOSPHOGLYCERATE KINASE 1) PHOSPHOGLYCERATE KINASE |
AT1G74030 | PredictedAffinity Capture-MS | FSW = 0.0150
| Unknown | ENOLASE PUTATIVE |
AT1G48850 | PredictedAffinity Capture-MS | FSW = 0.0029
| Unknown | EMB1144 (EMBRYO DEFECTIVE 1144) CHORISMATE SYNTHASE |
AT4G12610 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0255
| Unknown | TRANSCRIPTION INITIATION FACTOR IIF ALPHA SUBUNIT (TFIIF-ALPHA) FAMILY PROTEIN |
AT2G21170 | PredictedAffinity Capture-MS | FSW = 0.0105
| Unknown | TIM (TRIOSEPHOSPHATE ISOMERASE) CATALYTIC/ TRIOSE-PHOSPHATE ISOMERASE |
AT5G47690 | PredictedAffinity Capture-Western | FSW = 0.0206
| Unknown | BINDING |
AT3G58610 | PredictedAffinity Capture-MS | FSW = 0.0051
| Unknown | KETOL-ACID REDUCTOISOMERASE |
AT1G74260 | PredictedAffinity Capture-MS | FSW = 0.0217
| Unknown | PUR4 (PURINE BIOSYNTHESIS 4) ATP BINDING / CATALYTIC/ PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE |
AT1G56190 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0312
| Unknown | PHOSPHOGLYCERATE KINASE PUTATIVE |
AT1G14810 | PredictedAffinity Capture-MS | FSW = 0.0139
| Unknown | SEMIALDEHYDE DEHYDROGENASE FAMILY PROTEIN |
AT1G22170 | PredictedAffinity Capture-MS | FSW = 0.0093
| Unknown | PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE FAMILY PROTEIN |
AT2G29690 | PredictedAffinity Capture-MS | FSW = 0.0112
| Unknown | ASA2 (ANTHRANILATE SYNTHASE 2) ANTHRANILATE SYNTHASE |
AT5G40610 | PredictedAffinity Capture-MS | FSW = 0.0090
| Unknown | GLYCEROL-3-PHOSPHATE DEHYDROGENASE (NAD+) / GPDH |
AT1G80560 | PredictedAffinity Capture-MS | FSW = 0.0094
| Unknown | 3-ISOPROPYLMALATE DEHYDROGENASE CHLOROPLAST PUTATIVE |
AT2G28190 | PredictedAffinity Capture-MS | FSW = 0.0204
| Unknown | CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2) SUPEROXIDE DISMUTASE |
AT1G64190 | PredictedAffinity Capture-MS | FSW = 0.0058
| Unknown | 6-PHOSPHOGLUCONATE DEHYDROGENASE FAMILY PROTEIN |
AT3G13580 | PredictedAffinity Capture-MS | FSW = 0.0499
| Unknown | 60S RIBOSOMAL PROTEIN L7 (RPL7D) |
AT3G23940 | PredictedAffinity Capture-MS | FSW = 0.0044
| Unknown | DEHYDRATASE FAMILY |
AT3G48560 | PredictedAffinity Capture-MS | FSW = 0.0042
| Unknown | CSR1 (CHLORSULFURON/IMIDAZOLINONE RESISTANT 1) ACETOLACTATE SYNTHASE/ PYRUVATE DECARBOXYLASE |
AT3G60750 | PredictedAffinity Capture-MS | FSW = 0.0295
| Unknown | TRANSKETOLASE PUTATIVE |
AT5G63890 | PredictedAffinity Capture-MS | FSW = 0.0043
| Unknown | ATHDH (HISTIDINOL DEHYDROGENASE) HISTIDINOL DEHYDROGENASE |
AT1G31180 | PredictedAffinity Capture-MS | FSW = 0.0101
| Unknown | 3-ISOPROPYLMALATE DEHYDROGENASE CHLOROPLAST PUTATIVE |
AT1G24807 | PredictedAffinity Capture-MS | FSW = 0.0195
| Unknown | ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE |
AT4G13430 | PredictedAffinity Capture-MS | FSW = 0.0330
| Unknown | IIL1 (ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1) 4 IRON 4 SULFUR CLUSTER BINDING / HYDRO-LYASE/ LYASE |
AT5G54810 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0149
| Unknown | TSB1 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 1) TRYPTOPHAN SYNTHASE |
AT2G45290 | PredictedAffinity Capture-MS | FSW = 0.0179
| Unknown | TRANSKETOLASE PUTATIVE |
AT3G04770 | PredictedAffinity Capture-MS | FSW = 0.0227
| Unknown | RPSAB (40S RIBOSOMAL PROTEIN SA B) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT3G57610 | PredictedAffinity Capture-MS | FSW = 0.0109
| Unknown | ADSS (ADENYLOSUCCINATE SYNTHASE) ADENYLOSUCCINATE SYNTHASE |
AT5G53850 | PredictedAffinity Capture-MS | FSW = 0.0088
| Unknown | HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN |
AT5G56030 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.0170
| Unknown | HSP81-2 (HEAT SHOCK PROTEIN 81-2) ATP BINDING |
AT5G48230 | PredictedAffinity Capture-MS | FSW = 0.0149
| Unknown | ACAT2 (ACETOACETYL-COA THIOLASE 2) ACETYL-COA C-ACETYLTRANSFERASE/ CATALYTIC |
AT4G38740 | PredictedAffinity Capture-MSAffinity Capture-MSinteraction prediction | FSW = 0.0129
| Unknown | ROC1 (ROTAMASE CYP 1) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
AT2G16600 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0137
| Unknown | ROC3 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
AT5G60390 | PredictedAffinity Capture-MS | FSW = 0.0127
| Unknown | ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA |
AT1G07940 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0211
| Unknown | ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA |
AT3G09840 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0052
| Unknown | CDC48 (CELL DIVISION CYCLE 48) ATPASE/ IDENTICAL PROTEIN BINDING |
AT5G12250 | PredictedAffinity Capture-MS | FSW = 0.0090
| Unknown | TUB6 (BETA-6 TUBULIN) STRUCTURAL CONSTITUENT OF CYTOSKELETON |
AT1G02780 | PredictedAffinity Capture-MS | FSW = 0.0089
| Unknown | EMB2386 (EMBRYO DEFECTIVE 2386) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT5G39740 | PredictedAffinity Capture-MS | FSW = 0.0305
| Unknown | 60S RIBOSOMAL PROTEIN L5 (RPL5B) |
AT4G18100 | PredictedAffinity Capture-MS | FSW = 0.0109
| Unknown | 60S RIBOSOMAL PROTEIN L32 (RPL32A) |
AT4G00100 | PredictedAffinity Capture-MS | FSW = 0.0476
| Unknown | ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT3G48930 | PredictedAffinity Capture-MS | FSW = 0.0028
| Unknown | EMB1080 (EMBRYO DEFECTIVE 1080) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT3G12110 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0131
| Unknown | ACT11 (ACTIN-11) STRUCTURAL CONSTITUENT OF CYTOSKELETON |
AT4G34640 | PredictedAffinity Capture-MS | FSW = 0.0042
| Unknown | SQS1 (SQUALENE SYNTHASE 1) FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE |
AT5G52640 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.0466
| Unknown | ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING |
AT3G04050 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0149
| Unknown | PYRUVATE KINASE PUTATIVE |
AT1G16300 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0170
| Unknown | GAPCP-2 NAD OR NADH BINDING / BINDING / CATALYTIC/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (PHOSPHORYLATING)/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE |
AT5G63680 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0119
| Unknown | PYRUVATE KINASE PUTATIVE |
AT1G70600 | PredictedAffinity Capture-MS | FSW = 0.0683
| Unknown | STRUCTURAL CONSTITUENT OF RIBOSOME |
AT4G02230 | PredictedAffinity Capture-MS | FSW = 0.0518
| Unknown | 60S RIBOSOMAL PROTEIN L19 (RPL19C) |
AT1G08820 | PredictedAffinity Capture-MS | FSW = 0.0042
| Unknown | VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2) STRUCTURAL MOLECULE |
AT2G17440 | PredictedAffinity Capture-MS | FSW = 0.0175
| Unknown | LEUCINE-RICH REPEAT FAMILY PROTEIN |
AT5G46430 | PredictedAffinity Capture-MS | FSW = 0.0510
| Unknown | 60S RIBOSOMAL PROTEIN L32 (RPL32B) |
AT3G53870 | PredictedAffinity Capture-MS | FSW = 0.0534
| Unknown | 40S RIBOSOMAL PROTEIN S3 (RPS3B) |
AT4G15000 | PredictedAffinity Capture-MS | FSW = 0.0644
| Unknown | 60S RIBOSOMAL PROTEIN L27 (RPL27C) |
AT2G20580 | PredictedAffinity Capture-MS | FSW = 0.0342
| Unknown | RPN1A (26S PROTEASOME REGULATORY SUBUNIT S2 1A) BINDING / ENZYME REGULATOR |
AT1G79930 | PredictedAffinity Capture-MS | FSW = 0.0133
| Unknown | HSP91 ATP BINDING |
AT2G38740 | PredictedAffinity Capture-MS | FSW = 0.0079
| Unknown | HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN |
AT4G16830 | PredictedAffinity Capture-MS | FSW = 0.0094
| Unknown | NUCLEAR RNA-BINDING PROTEIN (RGGA) |
AT1G16460 | PredictedAffinity Capture-MS | FSW = 0.0105
| Unknown | ATRDH2 (ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 2) 3-MERCAPTOPYRUVATE SULFURTRANSFERASE/ THIOSULFATE SULFURTRANSFERASE |
AT3G06700 | PredictedAffinity Capture-MS | FSW = 0.0414
| Unknown | 60S RIBOSOMAL PROTEIN L29 (RPL29A) |
AT4G21010 | PredictedAffinity Capture-MS | FSW = 0.0190
| Unknown | TRANSCRIPTION INITIATION FACTOR-RELATED |
AT5G41580 | Predictedtwo hybridtwo hybridReconstituted ComplexAffinity Capture-Western | FSW = 0.0230
| Unknown | ZINC ION BINDING |
AT3G54280 | PredictedSynthetic RescueAffinity Capture-MSCo-expression | FSW = 0.0685
| Unknown | RGD3 (ROOT GROWTH DEFECTIVE 3) ATP BINDING / DNA BINDING / BINDING / HELICASE/ NUCLEIC ACID BINDING |
AT3G57150 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0372
| Unknown | NAP57 (ARABIDOPSIS THALIANA HOMOLOGUE OF NAP57) PSEUDOURIDINE SYNTHASE |
AT4G17390 | PredictedAffinity Capture-MS | FSW = 0.0568
| Unknown | 60S RIBOSOMAL PROTEIN L15 (RPL15B) |
AT4G19610 | PredictedAffinity Capture-MS | FSW = 0.0235
| Unknown | RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING |
AT5G08180 | PredictedAffinity Capture-MS | FSW = 0.0215
| Unknown | RIBOSOMAL PROTEIN L7AE/L30E/S12E/GADD45 FAMILY PROTEIN |
AT5G19310 | PredictedAffinity Capture-MS | FSW = 0.0178
| Unknown | HOMEOTIC GENE REGULATOR PUTATIVE |
AT3G57660 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0117
| Unknown | NRPA1 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ ZINC ION BINDING |
AT3G05060 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0412
| Unknown | SAR DNA-BINDING PROTEIN PUTATIVE |
AT2G47620 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0461
| Unknown | ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING |
AT3G13920 | PredictedAffinity Capture-MS | FSW = 0.0111
| Unknown | EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1) ATP-DEPENDENT HELICASE/ TRANSLATION INITIATION FACTOR |
AT3G06720 | Predictedinteraction predictiontwo hybrid | FSW = 0.0402
| Unknown | IMPA-1 (IMPORTIN ALPHA ISOFORM 1) BINDING / PROTEIN TRANSPORTER |
AT5G11170 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0130
| Unknown | ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING |
AT2G26150 | PredictedAffinity Capture-MS | FSW = 0.0044
| Unknown | ATHSFA2 DNA BINDING / TRANSCRIPTION FACTOR |
AT1G07370 | PredictedAffinity Capture-MSAffinity Capture-MSCo-expression | FSW = 0.0112
| Unknown | PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN) DNA BINDING / DNA POLYMERASE PROCESSIVITY FACTOR/ PROTEIN BINDING |
AT1G07470 | PredictedAffinity Capture-MS | FSW = 0.0290
| Unknown | TRANSCRIPTION FACTOR IIA LARGE SUBUNIT PUTATIVE / TFIIA LARGE SUBUNIT PUTATIVE |
AT2G15430 | PredictedAffinity Capture-MS | FSW = 0.0229
| Unknown | NRPB3 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION |
AT3G20010 | Predictedtwo hybridtwo hybridAffinity Capture-MSAffinity Capture-Westerninteraction predictionCo-expression | FSW = 0.0040
| Unknown | SNF2 DOMAIN-CONTAINING PROTEIN / HELICASE DOMAIN-CONTAINING PROTEIN / RING FINGER DOMAIN-CONTAINING PROTEIN |
AT4G14300 | PredictedAffinity Capture-MS | FSW = 0.0105
| Unknown | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / HNRNP PUTATIVE |
AT4G25340 | PredictedAffinity Capture-MS | FSW = 0.0062
| Unknown | IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
AT5G20730 | PredictedAffinity Capture-MS | FSW = 0.0035
| Unknown | NPH4 (NON-PHOTOTROPHIC HYPOCOTYL) DNA BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR/ TRANSCRIPTION REGULATOR |
AT1G11100 | Predictedtwo hybridAffinity Capture-MStwo hybrid | FSW = 0.0049
| Unknown | SNF2 DOMAIN-CONTAINING PROTEIN / HELICASE DOMAIN-CONTAINING PROTEIN / ZINC FINGER PROTEIN-RELATED |
AT5G58000 | PredictedAffinity Capture-MS | FSW = 0.0170
| Unknown | LOCATED IN ENDOPLASMIC RETICULUM CHLOROPLAST CONTAINS INTERPRO DOMAIN/S RETICULON (INTERPROIPR003388) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS RETICULON FAMILY PROTEIN (TAIRAT4G284301) HAS 1047 BLAST HITS TO 1034 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 715 FUNGI - 46 PLANTS - 58 VIRUSES - 4 OTHER EUKARYOTES - 222 (SOURCE NCBI BLINK) |
AT1G23290 | PredictedAffinity Capture-MS | FSW = 0.0125
| Unknown | RPL27AB STRUCTURAL CONSTITUENT OF RIBOSOME |
AT5G58420 | PredictedAffinity Capture-MS | FSW = 0.0533
| Unknown | 40S RIBOSOMAL PROTEIN S4 (RPS4D) |
AT1G18270 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0593
| Unknown | KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN |
AT3G06010 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0117
| Unknown | ATCHR12 ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING |
AT1G29880 | PredictedAffinity Capture-MS | FSW = 0.0079
| Unknown | GLYCYL-TRNA SYNTHETASE / GLYCINE--TRNA LIGASE |
AT1G55860 | Predictedinterologs mapping | FSW = 0.0440
| Unknown | UPL1 (UBIQUITIN-PROTEIN LIGASE 1) UBIQUITIN-PROTEIN LIGASE |
AT1G75510 | PredictedAffinity Capture-MS | FSW = 0.0220
| Unknown | TRANSCRIPTION INITIATION FACTOR IIF BETA SUBUNIT (TFIIF-BETA) FAMILY PROTEIN |
AT5G41670 | PredictedAffinity Capture-MS | FSW = 0.0267
| Unknown | 6-PHOSPHOGLUCONATE DEHYDROGENASE FAMILY PROTEIN |
AT1G79230 | PredictedAffinity Capture-MS | FSW = 0.0070
| Unknown | MST1 (MERCAPTOPYRUVATE SULFURTRANSFERASE 1) 3-MERCAPTOPYRUVATE SULFURTRANSFERASE/ SULFURTRANSFERASE/ THIOSULFATE SULFURTRANSFERASE |
AT4G02930 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0143
| Unknown | ELONGATION FACTOR TU PUTATIVE / EF-TU PUTATIVE |
AT4G26910 | Predictedtwo hybridinteraction prediction | FSW = 0.0303
| Unknown | 2-OXOACID DEHYDROGENASE FAMILY PROTEIN |
AT5G26780 | PredictedAffinity Capture-MS | FSW = 0.0105
| Unknown | SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2) CATALYTIC/ GLYCINE HYDROXYMETHYLTRANSFERASE/ PYRIDOXAL PHOSPHATE BINDING |
AT4G36480 | PredictedAffinity Capture-MS | FSW = 0.0304
| Unknown | ATLCB1 (LONG-CHAIN BASE1) PROTEIN BINDING / SERINE C-PALMITOYLTRANSFERASE |
AT5G47720 | PredictedAffinity Capture-MS | FSW = 0.0168
| Unknown | ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE |
AT3G23890 | Predictedinteraction predictionColocalizationbiochemicalAffinity Capture-WesternAffinity Capture-MStwo hybridCo-expression | FSW = 0.0413
| Unknown | TOPII (TOPOISOMERASE II) ATP BINDING / DNA BINDING / DNA TOPOISOMERASE (ATP-HYDROLYZING)/ DNA TOPOISOMERASE/ DNA-DEPENDENT ATPASE |
AT5G03340 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0110
| Unknown | CELL DIVISION CYCLE PROTEIN 48 PUTATIVE / CDC48 PUTATIVE |
AT2G15400 | PredictedAffinity Capture-MS | FSW = 0.0206
| Unknown | NRPE3B DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION |
AT4G27070 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0090
| Unknown | TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2) TRYPTOPHAN SYNTHASE |
AT1G61580 | PredictedAffinity Capture-MS | FSW = 0.0492
| Unknown | RPL3B (R-PROTEIN L3 B) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT5G55160 | PredictedShared biological functionPhylogenetic profile methodCo-expression | FSW = 0.0353
| Unknown | SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2) PROTEIN BINDING / PROTEIN TAG |
AT3G23580 | PredictedAffinity Capture-MS | FSW = 0.0230
| Unknown | RNR2A (RIBONUCLEOTIDE REDUCTASE 2A) RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE |
AT5G23880 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0039
| Unknown | CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100) DNA BINDING / PROTEIN BINDING |
AT2G45790 | PredictedAffinity Capture-MS | FSW = 0.0367
| Unknown | PMM (PHOSPHOMANNOMUTASE) PHOSPHOMANNOMUTASE |
AT4G13780 | PredictedAffinity Capture-MS | FSW = 0.0145
| Unknown | METHIONINE--TRNA LIGASE PUTATIVE / METHIONYL-TRNA SYNTHETASE PUTATIVE / METRS PUTATIVE |
AT1G05180 | PredictedAffinity Capture-MSAffinity Capture-WesternReconstituted Complexinteraction predictionShared biological functionEnriched domain pairCo-expression | FSW = 0.0135
| Unknown | AXR1 (AUXIN RESISTANT 1) SMALL PROTEIN ACTIVATING ENZYME |
AT1G08830 | PredictedAffinity Capture-MS | FSW = 0.0093
| Unknown | CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1) SUPEROXIDE DISMUTASE |
AT1G04170 | PredictedAffinity Capture-MS | FSW = 0.0093
| Unknown | EIF2 GAMMA TRANSLATION FACTOR NUCLEIC ACID BINDING / TRANSLATION INITIATION FACTOR |
AT1G20575 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0103
| Unknown | DOLICHYL-PHOSPHATE BETA-D-MANNOSYLTRANSFERASE PUTATIVE / DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE PUTATIVE / MANNOSE-P-DOLICHOL SYNTHASE PUTATIVE |
AT1G25220 | PredictedAffinity Capture-MS | FSW = 0.0186
| Unknown | ASB1 (ANTHRANILATE SYNTHASE BETA SUBUNIT 1) ANTHRANILATE SYNTHASE |
AT1G48970 | PredictedAffinity Capture-MS | FSW = 0.0148
| Unknown | GTP BINDING / TRANSLATION INITIATION FACTOR |
AT1G49520 | PredictedAffinity Capture-MS | FSW = 0.0199
| Unknown | SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN |
AT1G49760 | PredictedAffinity Capture-MS | FSW = 0.0127
| Unknown | PAB8 (POLY(A) BINDING PROTEIN 8) RNA BINDING / TRANSLATION INITIATION FACTOR |
AT1G55915 | Predictedtwo hybridinterologs mapping | FSW = 0.0062
| Unknown | ZINC ION BINDING |
AT1G57660 | PredictedAffinity Capture-MS | FSW = 0.0427
| Unknown | 60S RIBOSOMAL PROTEIN L21 (RPL21E) |
AT1G60620 | PredictedAffinity Capture-MS | FSW = 0.0355
| Unknown | ATRPAC43 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION |
AT1G61010 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0053
| Unknown | CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I) PROTEIN BINDING |
AT1G64520 | PredictedAffinity Capture-MS | FSW = 0.0110
| Unknown | RPN12A (REGULATORY PARTICLE NON-ATPASE 12A) PEPTIDASE |
AT1G66800 | PredictedAffinity Capture-MS | FSW = 0.0040
| Unknown | CINNAMYL-ALCOHOL DEHYDROGENASE FAMILY / CAD FAMILY |
AT1G67070 | PredictedAffinity Capture-MS | FSW = 0.0083
| Unknown | DIN9 (DARK INDUCIBLE 9) MANNOSE-6-PHOSPHATE ISOMERASE |
AT1G79990 | PredictedAffinity Capture-MS | FSW = 0.0163
| Unknown | LOCATED IN ENDOMEMBRANE SYSTEM COPI VESICLE COAT GOLGI MEMBRANE EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SYS1 HOMOLOGUE (INTERPROIPR016973) HAS 55556 BLAST HITS TO 24059 PROTEINS IN 620 SPECIES ARCHAE - 38 BACTERIA - 5697 METAZOA - 25539 FUNGI - 10898 PLANTS - 5309 VIRUSES - 0 OTHER EUKARYOTES - 8075 (SOURCE NCBI BLINK) |
AT2G21470 | PredictedReconstituted ComplexAffinity Capture-WesternAffinity Capture-MSSynthetic RescueDosage Growth Defectinteraction predictionEnriched domain pairCo-expression | FSW = 0.0462
| Unknown | SAE2 (SUMO-ACTIVATING ENZYME 2) SUMO ACTIVATING ENZYME |
AT2G37550 | PredictedAffinity Capture-MS | FSW = 0.0121
| Unknown | AGD7 ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING |
AT2G39770 | Predictedtwo hybridAffinity Capture-MS | FSW = 0.0945
| Unknown | CYT1 (CYTOKINESIS DEFECTIVE 1) MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE/ NUCLEOTIDYLTRANSFERASE |
AT2G41850 | PredictedAffinity Capture-MS | FSW = 0.0158
| Unknown | PGAZAT (POLYGALACTURONASE ABSCISSION ZONE A THALIANA) POLYGALACTURONASE |
AT2G45500 | Predictedtwo hybridAffinity Capture-MS | FSW = 0.0267
| Unknown | ATP BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING |
AT2G46280 | PredictedAffinity Capture-MS | FSW = 0.0132
| Unknown | TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1) NUCLEOTIDE BINDING / PROTEIN BINDING |
AT2G47830 | PredictedAffinity Capture-MS | FSW = 0.0216
| Unknown | CATION EFFLUX FAMILY PROTEIN / METAL TOLERANCE PROTEIN PUTATIVE (MTPC1) |
AT3G01090 | PredictedAffinity Capture-MS | FSW = 0.0147
| Unknown | AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) PROTEIN BINDING / PROTEIN KINASE |
AT3G03960 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0115
| Unknown | CHAPERONIN PUTATIVE |
AT3G09100 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0078
| Unknown | MRNA CAPPING ENZYME FAMILY PROTEIN |
AT3G12670 | PredictedAffinity Capture-MS | FSW = 0.0400
| Unknown | EMB2742 (EMBRYO DEFECTIVE 2742) CTP SYNTHASE/ CATALYTIC |
AT3G14010 | PredictedAffinity Capture-MS | FSW = 0.0295
| Unknown | CID4 (CTC-INTERACTING DOMAIN 4) PROTEIN BINDING |
AT3G18520 | PredictedAffinity Capture-MS | FSW = 0.0165
| Unknown | HDA15 HISTONE DEACETYLASE |
AT3G24090 | PredictedAffinity Capture-MS | FSW = 0.0216
| Unknown | GLUTAMINE-FRUCTOSE-6-PHOSPHATE TRANSAMINASE (ISOMERIZING)/ SUGAR BINDING / TRANSAMINASE |
AT3G26500 | PredictedAffinity Capture-MS | FSW = 0.0098
| Unknown | LEUCINE-RICH REPEAT FAMILY PROTEIN |
AT3G27060 | PredictedAffinity Capture-MS | FSW = 0.0118
| Unknown | TSO2 (TSO MEANING UGLY IN CHINESE) OXIDOREDUCTASE/ RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE/ TRANSITION METAL ION BINDING |
AT3G49470 | PredictedAffinity Capture-MS | FSW = 0.0170
| Unknown | NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2) |
AT3G49660 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0228
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT3G53570 | Predictedtwo hybrid | FSW = 0.0064
| Unknown | AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT3G57870 | Predictedinteraction predictiontwo hybridtwo hybridtwo hybridReconstituted ComplexReconstituted ComplexAffinity Capture-WesternCo-crystal Structure | FSW = 0.0344
| Unknown | SCE1 (SUMO CONJUGATION ENZYME 1) SUMO LIGASE |
AT3G62120 | PredictedAffinity Capture-MS | FSW = 0.0140
| Unknown | TRNA SYNTHETASE CLASS II (G H P AND S) FAMILY PROTEIN |
AT4G04460 | PredictedAffinity Capture-MS | FSW = 0.0083
| Unknown | ASPARTYL PROTEASE FAMILY PROTEIN |
AT4G10320 | PredictedAffinity Capture-MS | FSW = 0.0109
| Unknown | ISOLEUCYL-TRNA SYNTHETASE PUTATIVE / ISOLEUCINE--TRNA LIGASE PUTATIVE |
AT4G11820 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0230
| Unknown | MVA1 ACETYL-COA C-ACETYLTRANSFERASE/ HYDROXYMETHYLGLUTARYL-COA SYNTHASE |
AT4G25120 | Predictedinteraction predictiontwo hybridtwo hybridtwo hybridAffinity Capture-MSinterologs mapping | FSW = 0.0366
| Unknown | ATP BINDING / ATP-DEPENDENT DNA HELICASE/ DNA BINDING / HYDROLASE |
AT3G06910 | PredictedCo-crystal StructureReconstituted ComplexEnriched domain pairCo-expression | FSW = 0.0367
| Unknown | ULP1A (UB-LIKE PROTEASE 1A) SUMO-SPECIFIC PROTEASE/ CYSTEINE-TYPE PEPTIDASE |
AT4G32720 | PredictedAffinity Capture-MS | FSW = 0.0039
| Unknown | ATLA1 (ARABIDOPSIS THALIANA LA PROTEIN 1) RNA BINDING |
AT4G33620 | PredictedSynthetic RescuePhenotypic Suppression | FSW = 0.0739
| Unknown | ULP1 PROTEASE FAMILY PROTEIN |
AT4G34910 | PredictedAffinity Capture-MS | FSW = 0.0037
| Unknown | DEAD/DEAH BOX HELICASE PUTATIVE (RH16) |
AT4G36080 | PredictedAffinity Capture-MS | FSW = 0.0103
| Unknown | FAT DOMAIN-CONTAINING PROTEIN / PHOSPHATIDYLINOSITOL 3- AND 4-KINASE FAMILY PROTEIN |
AT4G38930 | Predictedtwo hybridAffinity Capture-MS | FSW = 0.0170
| Unknown | UBIQUITIN FUSION DEGRADATION UFD1 FAMILY PROTEIN |
AT5G03220 | PredictedAffinity Capture-MS | FSW = 0.0509
| Unknown | TRANSCRIPTIONAL CO-ACTIVATOR-RELATED |
AT5G11200 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0098
| Unknown | DEAD/DEAH BOX HELICASE PUTATIVE |
AT5G15920 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0193
| Unknown | STRUCTURAL MAINTENANCE OF CHROMOSOMES (SMC) FAMILY PROTEIN (MSS2) |
AT5G22010 | PredictedAffinity Capture-MS | FSW = 0.0035
| Unknown | ATRFC1 (REPLICATION FACTOR C 1) ATP BINDING / DNA BINDING / DNA CLAMP LOADER/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING |
AT5G26360 | PredictedAffinity Capture-MS | FSW = 0.0055
| Unknown | CHAPERONIN PUTATIVE |
AT5G37340 | PredictedAffinity Capture-MS | FSW = 0.0317
| Unknown | ZINC FINGER (ZPR1-TYPE) FAMILY PROTEIN |
AT5G41700 | Predictedsynthetic growth defect | FSW = 0.0105
| Unknown | UBC8 (UBIQUITIN CONJUGATING ENZYME 8) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE |
AT5G42000 | PredictedAffinity Capture-MS | FSW = 0.0053
| Unknown | ORMDL FAMILY PROTEIN |
AT5G45140 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0100
| Unknown | NRPC2 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ RIBONUCLEOSIDE BINDING |
AT5G48600 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0075
| Unknown | ATSMC3 (ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 3) ATP BINDING / TRANSPORTER |
AT5G55310 | PredictedAffinity Capture-MS | FSW = 0.0365
| Unknown | TOP1BETA (DNA TOPOISOMERASE 1 BETA) DNA TOPOISOMERASE TYPE I |
AT5G60040 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0241
| Unknown | NRPC1 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ RIBONUCLEOSIDE BINDING / ZINC ION BINDING |
AT5G65010 | PredictedAffinity Capture-MS | FSW = 0.0147
| Unknown | ASN2 (ASPARAGINE SYNTHETASE 2) ASPARAGINE SYNTHASE (GLUTAMINE-HYDROLYZING) |
AT5G66100 | PredictedAffinity Capture-MS | FSW = 0.0554
| Unknown | LA DOMAIN-CONTAINING PROTEIN |
AT1G30820 | PredictedAffinity Capture-MS | FSW = 0.0374
| Unknown | CTP SYNTHASE PUTATIVE / UTP--AMMONIA LIGASE PUTATIVE |
AT1G09080 | PredictedAffinity Capture-MS | FSW = 0.0072
| Unknown | BIP3 ATP BINDING |
AT1G15780 | PredictedAffinity Capture-MS | FSW = 0.0281
| Unknown | UNKNOWN PROTEIN |
AT1G22760 | PredictedAffinity Capture-MS | FSW = 0.0109
| Unknown | PAB3 (POLY(A) BINDING PROTEIN 3) RNA BINDING / TRANSLATION INITIATION FACTOR |
AT3G06000 | PredictedAffinity Capture-MS | FSW = 0.0035
| Unknown | LEUCINE-RICH REPEAT FAMILY PROTEIN |
AT1G52360 | PredictedAffinity Capture-MS | FSW = 0.0150
| Unknown | COATOMER PROTEIN COMPLEX SUBUNIT BETA 2 (BETA PRIME) PUTATIVE |
AT1G11660 | PredictedAffinity Capture-MS | FSW = 0.0162
| Unknown | HEAT SHOCK PROTEIN PUTATIVE |
AT5G55300 | PredictedAffinity Capture-MS | FSW = 0.0210
| Unknown | TOP1ALPHA (DNA TOPOISOMERASE I ALPHA) DNA TOPOISOMERASE TYPE I |
AT4G11080 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0042
| Unknown | HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN |
AT4G20330 | PredictedAffinity Capture-MS | FSW = 0.0147
| Unknown | TRANSCRIPTION INITIATION FACTOR-RELATED |
AT2G17930 | PredictedAffinity Capture-MS | FSW = 0.0106
| Unknown | BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR |
AT2G32220 | PredictedAffinity Capture-MS | FSW = 0.0106
| Unknown | 60S RIBOSOMAL PROTEIN L27 (RPL27A) |
AT3G06680 | PredictedAffinity Capture-MSCo-expression | FSW = 0.0042
| Unknown | 60S RIBOSOMAL PROTEIN L29 (RPL29B) |
AT1G54170 | PredictedAffinity Capture-MS | FSW = 0.0193
| Unknown | CID3 (CTC-INTERACTING DOMAIN 3) |
AT3G13224 | PredictedAffinity Capture-MS | FSW = 0.0105
| Unknown | RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN |
AT4G35890 | PredictedAffinity Capture-MS | FSW = 0.0224
| Unknown | LA DOMAIN-CONTAINING PROTEIN |
AT1G33040 | PredictedAffinity Capture-MS | FSW = 0.0102
| Unknown | NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5) |
AT1G79880 | PredictedAffinity Capture-MS | FSW = 0.0029
| Unknown | LA DOMAIN-CONTAINING PROTEIN |
AT5G55810 | PredictedAffinity Capture-MS | FSW = 0.0149
| Unknown | ATNMNAT (A THALIANA NICOTINATE/NICOTINAMIDE MONONUCLEOTIDE ADENYLTRANSFERASE) NICOTINAMIDE-NUCLEOTIDE ADENYLYLTRANSFERASE/ NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE |
AT1G02460 | PredictedAffinity Capture-MS | FSW = 0.0158
| Unknown | GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN |
AT3G47340 | PredictedAffinity Capture-MS | FSW = 0.0228
| Unknown | ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1) ASPARAGINE SYNTHASE (GLUTAMINE-HYDROLYZING) |
AT2G21270 | PredictedAffinity Capture-MStwo hybrid | FSW = 0.0244
| Unknown | UBIQUITIN FUSION DEGRADATION UFD1 FAMILY PROTEIN |
AT3G12340 | PredictedAffinity Capture-MS | FSW = 0.0120
| Unknown | FK506 BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
AT5G22480 | PredictedAffinity Capture-MS | FSW = 0.0202
| Unknown | ZINC FINGER (ZPR1-TYPE) FAMILY PROTEIN |
AT1G77600 | PredictedAffinity Capture-WesternCo-expression | FSW = 0.0089
| Unknown | BINDING |
AT5G39320 | Predictedtwo hybrid | FSW = 0.0088
| Unknown | UDP-GLUCOSE 6-DEHYDROGENASE PUTATIVE |
AT4G15930 | Predictedtwo hybridCo-expression | FSW = 0.0072
| Unknown | MICROTUBULE MOTOR |
AT3G27120 | Predictedtwo hybrid | FSW = 0.0177
| Unknown | ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING |
AT3G22480 | Predictedtwo hybridCo-expression | FSW = 0.0324
| Unknown | PREFOLDIN-RELATED KE2 FAMILY PROTEIN |
AT1G48360 | Predictedtwo hybrid | FSW = 0.0202
| Unknown | HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING / ZINC ION BINDING |
AT1G08910 | Predictedtwo hybridtwo hybridinteraction prediction | FSW = 0.0181
| Unknown | EMB3001 (EMBRYO DEFECTIVE 3001) ZINC ION BINDING |
AT1G02690 | Predictedtwo hybridCo-expression | FSW = 0.0322
| Unknown | IMPA-6 (IMPORTIN ALPHA ISOFORM 6) BINDING / PROTEIN TRANSPORTER |
AT3G27440 | Predictedinteraction prediction | FSW = 0.0021
| Unknown | URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE |
AT2G32765 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.0260
| Unknown | SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5) PROTEIN TAG |
AT5G48710 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.0291
| Unknown | UBIQUITIN-RELATED |
AT5G55170 | PredictedShared biological functionPhylogenetic profile methodCo-expression | FSW = 0.0467
| Unknown | SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3) PROTEIN BINDING / PROTEIN TAG |
AT5G48700 | PredictedPhylogenetic profile method | FSW = 0.0868
| Unknown | UBIQUITIN-RELATED |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454