Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Welcome to AtPIN
AtPIN will be upgraded. Please send your suggestions here
AT5G39740 - ( 60S ribosomal protein L5 (RPL5B) )
95 Proteins interacs with AT5G39740Locus | Method | FSW ![]() | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT3G25520![]() ![]() ![]() ![]() | PredictedGene fusion methodPhylogenetic profile methodCo-expression | FSW = 0.4453
| Class C:plasma membranenucleus | ATL5 (A THALIANA RIBOSOMAL PROTEIN L5) 5S RRNA BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME |
AT2G42740![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.3148
| Class C:plasma membranenucleus | RPL16A STRUCTURAL CONSTITUENT OF RIBOSOME |
AT1G56070![]() ![]() ![]() ![]() | Predictedtwo hybridtwo hybrid | FSW = 0.0193
| Class C:plasma membranenucleus | LOS1 COPPER ION BINDING / TRANSLATION ELONGATION FACTOR/ TRANSLATION FACTOR NUCLEIC ACID BINDING |
AT5G20290![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2151
| Class C:plasma membranenucleus | 40S RIBOSOMAL PROTEIN S8 (RPS8A) |
AT2G27710![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.1724
| Class C:plasma membranenucleus | 60S ACIDIC RIBOSOMAL PROTEIN P2 (RPP2B) |
AT3G11964 | PredictedAffinity Capture-MS | FSW = 0.2708
| Class C:plasma membranenucleus | RNA BINDING |
AT2G33370 | PredictedAffinity Capture-MS | FSW = 0.1308
| Class C:plasma membranenucleus | 60S RIBOSOMAL PROTEIN L23 (RPL23B) |
AT2G37190![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2577
| Class C:plasma membranenucleus | 60S RIBOSOMAL PROTEIN L12 (RPL12A) |
AT4G00100![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2353
| Class C:plasma membranenucleus | ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT2G17360![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.1458
| Class C:plasma membrane | 40S RIBOSOMAL PROTEIN S4 (RPS4A) |
AT2G37270![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.1611
| Class C:plasma membrane | ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT5G02450![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0331
| Class C:plasma membrane | 60S RIBOSOMAL PROTEIN L36 (RPL36C) |
AT5G27850![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.1916
| Class C:plasma membrane | 60S RIBOSOMAL PROTEIN L18 (RPL18C) |
AT3G28715![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0122
| Class C:plasma membrane | H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE |
AT1G07770![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2313
| Class C:plasma membrane | RPS15A (RIBOSOMAL PROTEIN S15A) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT3G28710![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0044
| Class C:plasma membrane | H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE |
AT2G09990![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2280
| Class C:plasma membrane | 40S RIBOSOMAL PROTEIN S16 (RPS16A) |
AT5G64740![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0060
| Class C:plasma membrane | CESA6 (CELLULOSE SYNTHASE 6) CELLULOSE SYNTHASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS |
AT2G37600![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.3143
| Class C:plasma membrane | 60S RIBOSOMAL PROTEIN L36 (RPL36A) |
AT3G53870![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.1571
| Class C:plasma membrane | 40S RIBOSOMAL PROTEIN S3 (RPS3B) |
AT1G26630![]() ![]() ![]() ![]() | Predictedin vivoin vitrotwo hybridAffinity Capture-MS | FSW = 0.0165
| Class C:plasma membrane | FBR12 (FUMONISIN B1-RESISTANT12) TRANSLATION INITIATION FACTOR |
AT5G15200![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2250
| Class C:nucleus | 40S RIBOSOMAL PROTEIN S9 (RPS9B) |
AT5G22440![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.3765
| Class C:nucleus | 60S RIBOSOMAL PROTEIN L10A (RPL10AC) |
AT5G35620![]() ![]() ![]() ![]() | Predictedtwo hybridCo-expression | FSW = 0.0109
| Class C:nucleus | LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1) RNA 7-METHYLGUANOSINE CAP BINDING / RNA BINDING / TRANSLATION INITIATION FACTOR |
AT5G04600![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.3551
| Class C:nucleus | RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN |
AT3G55620![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSinteraction prediction | FSW = 0.3130
| Class C:nucleus | EMB1624 (EMBRYO DEFECTIVE 1624) RIBOSOME BINDING / TRANSLATION INITIATION FACTOR |
AT1G74060![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.1887
| Class C:nucleus | 60S RIBOSOMAL PROTEIN L6 (RPL6B) |
AT4G25630![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2314
| Class C:nucleus | FIB2 (FIBRILLARIN 2) SNORNA BINDING |
AT3G58660![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSinteraction predictionCo-expression | FSW = 0.4163
| Class C:nucleus | 60S RIBOSOMAL PROTEIN-RELATED |
AT3G23620![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSfar western blottingAffinity Capture-MSAffinity Capture-WesternCo-purification | FSW = 0.3538
| Class C:nucleus | BRIX DOMAIN-CONTAINING PROTEIN |
AT4G17390![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.4321
| Class C:nucleus | 60S RIBOSOMAL PROTEIN L15 (RPL15B) |
AT1G72440![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3787
| Class C:nucleus | EDA25 (EMBRYO SAC DEVELOPMENT ARREST 25) |
AT3G16810![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3819
| Class C:nucleus | APUM24 (ARABIDOPSIS PUMILIO 24) RNA BINDING / BINDING |
AT5G48240![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2230
| Class C:nucleus | UNKNOWN PROTEIN |
AT5G55920![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3883
| Class C:nucleus | NUCLEOLAR PROTEIN PUTATIVE |
AT3G05060![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.1064
| Class C:nucleus | SAR DNA-BINDING PROTEIN PUTATIVE |
AT3G62310![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2370
| Class C:nucleus | RNA HELICASE PUTATIVE |
AT5G15550![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2883
| Class C:nucleus | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT2G37990![]() ![]() ![]() ![]() | PredictedAffinity Capture-Westerntwo hybridAffinity Capture-WesternProtein-RNAReconstituted ComplexAffinity Capture-MSCo-purification | FSW = 0.1722
| Class C:nucleus | RIBOSOME BIOGENESIS REGULATORY PROTEIN (RRS1) FAMILY PROTEIN |
AT1G33140![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2152
| Unknown | PGY2 (PIGGYBACK2) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT4G14800![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.0033
| Unknown | PBD2 (20S PROTEASOME BETA SUBUNIT 2) PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE |
AT4G18730 | PredictedAffinity Capture-MSfar western blotting | FSW = 0.1414
| Unknown | RPL16B STRUCTURAL CONSTITUENT OF RIBOSOME |
AT5G63840![]() ![]() ![]() ![]() | Predictedtwo hybridtwo hybrid | FSW = 0.0081
| Unknown | RSW3 (RADIAL SWELLING 3) GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS |
AT3G13580![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.4886
| Unknown | 60S RIBOSOMAL PROTEIN L7 (RPL7D) |
AT3G30775![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0117
| Unknown | ERD5 (EARLY RESPONSIVE TO DEHYDRATION 5) PROLINE DEHYDROGENASE |
AT5G38710![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0337
| Unknown | PROLINE OXIDASE PUTATIVE / OSMOTIC STRESS-RESPONSIVE PROLINE DEHYDROGENASE PUTATIVE |
AT5G59240![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2639
| Unknown | 40S RIBOSOMAL PROTEIN S8 (RPS8B) |
AT1G50920![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.4776
| Unknown | GTP-BINDING PROTEIN-RELATED |
AT1G61580![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.4862
| Unknown | RPL3B (R-PROTEIN L3 B) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT4G30800![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.1131
| Unknown | 40S RIBOSOMAL PROTEIN S11 (RPS11B) |
AT5G56710![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2087
| Unknown | 60S RIBOSOMAL PROTEIN L31 (RPL31C) |
AT4G26840![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.0305
| Unknown | SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG |
AT3G22660![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.3166
| Unknown | RRNA PROCESSING PROTEIN-RELATED |
AT2G27970![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0067
| Unknown | CKS2 (CDK-SUBUNIT 2) CYCLIN-DEPENDENT PROTEIN KINASE/ CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR |
AT3G24080![]() ![]() ![]() ![]() | Predictedtwo hybridtwo hybridCo-expression | FSW = 0.1288
| Unknown | KRR1 FAMILY PROTEIN |
AT5G01390![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0070
| Unknown | DNAJ HEAT SHOCK PROTEIN PUTATIVE |
AT5G06160![]() ![]() ![]() ![]() | Predictedtwo hybridtwo hybridCo-expression | FSW = 0.0132
| Unknown | ATO (ATROPOS) NUCLEIC ACID BINDING / ZINC ION BINDING |
AT5G12980![]() ![]() ![]() ![]() | Predictedtwo hybridtwo hybrid | FSW = 0.0117
| Unknown | RCD1-LIKE CELL DIFFERENTIATION PROTEIN PUTATIVE |
AT3G05760![]() ![]() ![]() ![]() | Predictedtwo hybridtwo hybrid | FSW = 0.0075
| Unknown | NUCLEIC ACID BINDING / ZINC ION BINDING |
AT3G55480![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0068
| Unknown | ADAPTIN FAMILY PROTEIN |
AT2G16950![]() ![]() ![]() ![]() | Predictedin vitro | FSW = 0.0366
| Unknown | TRN1 (TRANSPORTIN 1) PROTEIN TRANSPORTER |
AT3G02760![]() ![]() ![]() ![]() | Predictedin vitroin vivoAffinity Capture-MS | FSW = 0.0260
| Unknown | ATP BINDING / AMINOACYL-TRNA LIGASE/ HISTIDINE-TRNA LIGASE/ NUCLEOTIDE BINDING |
AT3G59020![]() ![]() ![]() ![]() | Predictedin vitro | FSW = 0.0114
| Unknown | BINDING / PROTEIN TRANSPORTER |
AT5G47080![]() ![]() ![]() ![]() | Predictedtwo hybridtwo hybridtwo hybridin vivoin vivotwo hybridin vitroin vivo | FSW = 0.0194
| Unknown | CKB1 PROTEIN KINASE REGULATOR |
AT5G67380![]() ![]() ![]() ![]() | Predictedbiochemical | FSW = 0.0605
| Unknown | CKA1 (CASEIN KINASE ALPHA 1) KINASE |
AT4G15770![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2909
| Unknown | RNA BINDING / PROTEIN BINDING |
AT1G03530![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.1126
| Unknown | NAF1 (NUCLEAR ASSEMBLY FACTOR 1) |
AT1G10170![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.0268
| Unknown | ATNFXL1 (ARABIDOPSIS THALIANA NF-X-LIKE 1) PROTEIN BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING |
AT1G13160![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2154
| Unknown | SDA1 FAMILY PROTEIN |
AT1G25260![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2232
| Unknown | ACIDIC RIBOSOMAL PROTEIN P0-RELATED |
AT1G52980![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.2124
| Unknown | GTP-BINDING FAMILY PROTEIN |
AT1G73570![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.0104
| Unknown | SUPPRESSOR OF LIN-12-LIKE PROTEIN-RELATED / SEL-1 PROTEIN-RELATED |
AT1G79150![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.3201
| Unknown | BINDING |
AT2G03820![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.0838
| Unknown | NONSENSE-MEDIATED MRNA DECAY NMD3 FAMILY PROTEIN |
AT2G18220![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3849
| Unknown | INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S UNCHARACTERISED PROTEIN FAMILY UPF0120 (INTERPROIPR005343) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS RBL (REBELOTE) (TAIRAT3G555101) HAS 4846 BLAST HITS TO 3236 PROTEINS IN 249 SPECIES ARCHAE - 2 BACTERIA - 127 METAZOA - 2049 FUNGI - 594 PLANTS - 200 VIRUSES - 69 OTHER EUKARYOTES - 1805 (SOURCE NCBI BLINK) |
AT2G21440![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.3072
| Unknown | RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN |
AT2G27200![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.1689
| Unknown | GTP-BINDING FAMILY PROTEIN |
AT2G34357 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2246
| Unknown | BINDING |
AT2G36930![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.1641
| Unknown | ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN |
AT3G15460![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3848
| Unknown | BRIX DOMAIN-CONTAINING PROTEIN |
AT3G16840![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.2086
| Unknown | ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING |
AT3G24830![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2825
| Unknown | 60S RIBOSOMAL PROTEIN L13A (RPL13AB) |
AT3G55280![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.4264
| Unknown | RPL23AB (RIBOSOMAL PROTEIN L23AB) RNA BINDING / NUCLEOTIDE BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME |
AT4G01560![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3161
| Unknown | MEE49 (MATERNAL EFFECT EMBRYO ARREST 49) |
AT4G16630![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.3495
| Unknown | DEAD/DEAH BOX HELICASE PUTATIVE (RH28) |
AT4G18905![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.0905
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT5G05450![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.3518
| Unknown | DEAD/DEAH BOX HELICASE PUTATIVE (RH18) |
AT5G06360![]() ![]() ![]() ![]() | PredictedAffinity Capture-Western | FSW = 0.2058
| Unknown | RIBOSOMAL PROTEIN S8E FAMILY PROTEIN |
AT5G14520![]() ![]() ![]() ![]() | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MS | FSW = 0.3456
| Unknown | PESCADILLO-RELATED |
AT5G20600![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.3401
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RRNA PROCESSING LOCATED IN PRERIBOSOME SMALL SUBUNIT PRECURSOR EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NUCLEOLAR NOP52 (INTERPROIPR010301) HAS 444 BLAST HITS TO 431 PROTEINS IN 151 SPECIES ARCHAE - 0 BACTERIA - 10 METAZOA - 196 FUNGI - 114 PLANTS - 27 VIRUSES - 0 OTHER EUKARYOTES - 97 (SOURCE NCBI BLINK) |
AT5G46840![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.2736
| Unknown | RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN |
AT5G65900![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.5006
| Unknown | DEAD/DEAH BOX HELICASE PUTATIVE |
AT5G66100![]() ![]() ![]() ![]() | PredictedAffinity Capture-MS | FSW = 0.0658
| Unknown | LA DOMAIN-CONTAINING PROTEIN |
AT5G54750![]() ![]() ![]() ![]() | Predictedtwo hybridCo-expression | FSW = 0.0300
| Unknown | TRANSPORT PROTEIN PARTICLE (TRAPP) COMPONENT BET3 PUTATIVE |
AT4G28480![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0457
| Unknown | DNAJ HEAT SHOCK FAMILY PROTEIN |
Downloads
Quick help
Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454