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AT1G07770 - ( RPS15A (ribosomal protein s15a) structural constituent of ribosome )

112 Proteins interacs with AT1G07770

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G01830	Experimental	FSW = 0.0142	Unknown	WOL (WOODEN LEG) CYTOKININ RECEPTOR/ OSMOSENSOR/ PHOSPHOPROTEIN PHOSPHATASE/ PROTEIN HISTIDINE KINASE
AT3G04920	Predicted Affinity Capture-MS	FSW = 0.4065	Class C: vacuole plasma membrane	40S RIBOSOMAL PROTEIN S24 (RPS24A)
AT3G49910	Predicted Affinity Capture-MS	FSW = 0.2898	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L26 (RPL26A)
AT2G18020	Predicted Affinity Capture-MS	FSW = 0.4515	Class C: vacuole plasma membrane	EMB2296 (EMBRYO DEFECTIVE 2296) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G09630	Predicted Affinity Capture-MS	FSW = 0.2697	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT2G42740	Predicted Affinity Capture-MS	FSW = 0.4756	Class C: vacuole plasma membrane	RPL16A STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G09200	Predicted Affinity Capture-MS	FSW = 0.2898	Class C: vacuole plasma membrane	60S ACIDIC RIBOSOMAL PROTEIN P0 (RPP0B)
AT2G36160	Predicted Affinity Capture-MS	FSW = 0.1041	Class C: vacuole plasma membrane	40S RIBOSOMAL PROTEIN S14 (RPS14A)
AT2G17360	Predicted Affinity Capture-MS	FSW = 0.3007	Class C: vacuole plasma membrane	40S RIBOSOMAL PROTEIN S4 (RPS4A)
AT3G49010	Predicted Affinity Capture-MS	FSW = 0.3287	Class C: vacuole plasma membrane	ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G67430	Predicted Affinity Capture-MS	FSW = 0.4564	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L17 (RPL17B)
AT2G37270	Predicted Affinity Capture-MS	FSW = 0.4109	Class C: vacuole plasma membrane	ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G22780	Predicted Affinity Capture-MS	FSW = 0.0349	Class C: vacuole plasma membrane	PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G34480	Predicted Affinity Capture-MS	FSW = 0.3308	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L18A (RPL18AB)
AT5G15200	Predicted Affinity Capture-MS	FSW = 0.4851	Class C: vacuole	40S RIBOSOMAL PROTEIN S9 (RPS9B)
AT2G47610	Predicted Affinity Capture-MS	FSW = 0.3857	Class C: vacuole	60S RIBOSOMAL PROTEIN L7A (RPL7AA)
AT1G33140	Predicted Affinity Capture-MS	FSW = 0.3202	Class C: vacuole	PGY2 (PIGGYBACK2) STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G39660	Predicted two hybrid	FSW = 0.0192	Class C: vacuole	AGT2 (ALANINEGLYOXYLATE AMINOTRANSFERASE 2) ALANINE-GLYOXYLATE TRANSAMINASE/ CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE
AT1G66580	Predicted Affinity Capture-MS	FSW = 0.4293	Class C: vacuole	60S RIBOSOMAL PROTEIN L10 (RPL10C)
AT5G25780	Predicted Affinity Capture-MS	FSW = 0.0938	Class C: vacuole	EIF3B-2 (EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2) NUCLEIC ACID BINDING / PROTEIN BINDING / TRANSLATION INITIATION FACTOR
AT5G20290	Predicted Affinity Capture-MS	FSW = 0.5123	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S8 (RPS8A)
AT2G09990	Predicted Affinity Capture-MS	FSW = 0.4705	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S16 (RPS16A)
AT1G48830	Predicted Affinity Capture-MS	FSW = 0.3599	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S7 (RPS7A)
AT3G58510	Predicted Affinity Capture-MS	FSW = 0.2317	Class C: plasma membrane	DEAD BOX RNA HELICASE PUTATIVE (RH11)
AT3G11510	Predicted Affinity Capture-MS	FSW = 0.4793	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S14 (RPS14B)
AT5G39740	Predicted Affinity Capture-MS	FSW = 0.2313	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L5 (RPL5B)
AT2G37190	Predicted Affinity Capture-MS	FSW = 0.4603	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L12 (RPL12A)
AT4G00100	Predicted Affinity Capture-MS	FSW = 0.5293	Class C: plasma membrane	ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A) STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G27710	Predicted Affinity Capture-MS	FSW = 0.3624	Class C: plasma membrane	60S ACIDIC RIBOSOMAL PROTEIN P2 (RPP2B)
AT2G04390	Predicted Affinity Capture-MS	FSW = 0.1908	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S17 (RPS17A)
AT4G34670	Predicted Affinity Capture-MS	FSW = 0.4043	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S3A (RPS3AB)
AT5G52640	Predicted two hybrid	FSW = 0.0228	Class C: plasma membrane	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT5G62300	Predicted Affinity Capture-MS	FSW = 0.0664	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT2G37600	Predicted Affinity Capture-MS	FSW = 0.4146	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L36 (RPL36A)
AT1G70600	Predicted Affinity Capture-MS	FSW = 0.4308	Class C: plasma membrane	STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G76810	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2494	Class C: plasma membrane	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 FAMILY PROTEIN / EIF-2 FAMILY PROTEIN
AT4G15000	Predicted Affinity Capture-MS	FSW = 0.3053	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L27 (RPL27C)
AT3G53870	Predicted Affinity Capture-MS	FSW = 0.3639	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S3 (RPS3B)
AT3G11400	Predicted Affinity Capture-MS	FSW = 0.1470	Class C: plasma membrane	EUKARYOTIC TRANSLATION INITIATION FACTOR 3G / EIF3G
AT5G22440	Predicted Affinity Capture-MS	FSW = 0.4184	Unknown	60S RIBOSOMAL PROTEIN L10A (RPL10AC)
AT3G13580	Predicted Affinity Capture-MS	FSW = 0.3858	Unknown	60S RIBOSOMAL PROTEIN L7 (RPL7D)
AT3G06530	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1768	Unknown	BINDING
AT1G06380	Predicted Affinity Capture-MS	FSW = 0.0696	Unknown	RIBOSOMAL PROTEIN-RELATED
AT2G47250	Predicted Affinity Capture-MS	FSW = 0.0625	Unknown	RNA HELICASE PUTATIVE
AT5G57015	Predicted Affinity Capture-MS	FSW = 0.0566	Unknown	CKL12 (CASEIN KINASE I-LIKE 12) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G03930	Predicted Affinity Capture-MS	FSW = 0.0407	Unknown	ADK1 (DUAL SPECIFICITY KINASE 1) KINASE/ PROTEIN SERINE/THREONINE/TYROSINE KINASE
AT3G57150	Predicted Affinity Capture-MS	FSW = 0.2374	Unknown	NAP57 (ARABIDOPSIS THALIANA HOMOLOGUE OF NAP57) PSEUDOURIDINE SYNTHASE
AT4G17390	Predicted Affinity Capture-MS	FSW = 0.4337	Unknown	60S RIBOSOMAL PROTEIN L15 (RPL15B)
AT5G58420	Predicted Affinity Capture-MS	FSW = 0.4975	Unknown	40S RIBOSOMAL PROTEIN S4 (RPS4D)
AT4G25630	Predicted Affinity Capture-MS	FSW = 0.2679	Unknown	FIB2 (FIBRILLARIN 2) SNORNA BINDING
AT1G74060	Predicted Affinity Capture-MS	FSW = 0.3395	Unknown	60S RIBOSOMAL PROTEIN L6 (RPL6B)
AT1G72440	Predicted Affinity Capture-MS	FSW = 0.2260	Unknown	EDA25 (EMBRYO SAC DEVELOPMENT ARREST 25)
AT1G63810	Predicted Affinity Capture-MS	FSW = 0.1885	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NRAP PROTEIN (INTERPROIPR005554) HAS 268 BLAST HITS TO 263 PROTEINS IN 124 SPECIES ARCHAE - 3 BACTERIA - 0 METAZOA - 116 FUNGI - 89 PLANTS - 17 VIRUSES - 0 OTHER EUKARYOTES - 43 (SOURCE NCBI BLINK)
AT3G58660	Predicted Affinity Capture-MS	FSW = 0.1838	Unknown	60S RIBOSOMAL PROTEIN-RELATED
AT3G05060	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1851	Unknown	SAR DNA-BINDING PROTEIN PUTATIVE
AT3G62310	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1602	Unknown	RNA HELICASE PUTATIVE
AT3G12860	Predicted Affinity Capture-MS	FSW = 0.1794	Unknown	NUCLEOLAR PROTEIN NOP56 PUTATIVE
AT4G18040	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0640	Unknown	EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E) RNA BINDING / RNA CAP BINDING / PROTEIN BINDING / TRANSLATION INITIATION FACTOR
AT3G16980	Predicted two hybrid interaction prediction	FSW = 0.0044	Unknown	NRPB9A DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ NUCLEIC ACID BINDING / TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT3G18130	Predicted Affinity Capture-MS	FSW = 0.1031	Unknown	RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C) NUCLEOTIDE BINDING
AT5G66540	Predicted Affinity Capture-MS	FSW = 0.1687	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RRNA PROCESSING LOCATED IN CYTOSOL NUCLEOLUS NUCLEUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 12 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN COMPLEX SUBUNIT MPP10P (INTERPROIPR012173) MPP10 PROTEIN (INTERPROIPR007151) HAS 76240 BLAST HITS TO 38667 PROTEINS IN 1479 SPECIES ARCHAE - 252 BACTERIA - 6537 METAZOA - 31185 FUNGI - 9935 PLANTS - 3937 VIRUSES - 750 OTHER EUKARYOTES - 23644 (SOURCE NCBI BLINK)
AT4G23900	Predicted Affinity Capture-MS	FSW = 0.0510	Unknown	NUCLEOSIDE DIPHOSPHATE KINASE 4 (NDK4)
AT1G71270	Predicted two hybrid two hybrid	FSW = 0.0085	Unknown	POK (POKY POLLEN TUBE)
AT5G52650	Predicted Affinity Capture-MS	FSW = 0.1182	Unknown	40S RIBOSOMAL PROTEIN S10 (RPS10C)
AT4G30800	Predicted Affinity Capture-MS	FSW = 0.3270	Unknown	40S RIBOSOMAL PROTEIN S11 (RPS11B)
AT5G56710	Predicted Affinity Capture-MS	FSW = 0.3163	Unknown	60S RIBOSOMAL PROTEIN L31 (RPL31C)
AT1G61580	Predicted Affinity Capture-MS	FSW = 0.4002	Unknown	RPL3B (R-PROTEIN L3 B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G29430	Predicted Phylogenetic profile method Co-expression	FSW = 0.0419	Unknown	RPS15AE (RIBOSOMAL PROTEIN S15A E) STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G59240	Predicted Affinity Capture-MS	FSW = 0.4977	Unknown	40S RIBOSOMAL PROTEIN S8 (RPS8B)
AT1G10490	Predicted Affinity Capture-MS	FSW = 0.3097	Unknown	UNKNOWN PROTEIN
AT2G22240	Predicted two hybrid	FSW = 0.0189	Unknown	MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2) BINDING / CATALYTIC/ INOSITOL-3-PHOSPHATE SYNTHASE
AT4G39800	Predicted interaction prediction	FSW = 0.0189	Unknown	MIPS1 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 1) INOSITOL-3-PHOSPHATE SYNTHASE
AT3G46220	Predicted two hybrid two hybrid	FSW = 0.0292	Unknown	UNKNOWN PROTEIN
AT2G26000	Predicted two hybrid two hybrid	FSW = 0.0274	Unknown	ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN
AT1G03530	Predicted Affinity Capture-MS	FSW = 0.1677	Unknown	NAF1 (NUCLEAR ASSEMBLY FACTOR 1)
AT1G04170	Predicted Affinity Capture-MS	FSW = 0.0908	Unknown	EIF2 GAMMA TRANSLATION FACTOR NUCLEIC ACID BINDING / TRANSLATION INITIATION FACTOR
AT1G08780	Predicted Synthetic Lethality interaction prediction	FSW = 0.0150	Unknown	AIP3 (ABI3-INTERACTING PROTEIN 3) UNFOLDED PROTEIN BINDING
AT1G15440	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1660	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G16280	Predicted Affinity Capture-MS	FSW = 0.0812	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT1G29990	Predicted Synthetic Lethality interaction prediction	FSW = 0.0100	Unknown	PDF6 (PREFOLDIN 6) UNFOLDED PROTEIN BINDING
AT1G31660	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2761	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S BYSTIN (INTERPROIPR007955) HAS 370 BLAST HITS TO 362 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 7 METAZOA - 139 FUNGI - 93 PLANTS - 32 VIRUSES - 0 OTHER EUKARYOTES - 99 (SOURCE NCBI BLINK)
AT1G42440	Predicted Affinity Capture-MS	FSW = 0.1815	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RIBOSOME BIOGENESIS LOCATED IN NUCLEUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S AARP2CN (INTERPROIPR012948) PROTEIN OF UNKNOWN FUNCTION DUF663 (INTERPROIPR007034) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G067201) HAS 2447 BLAST HITS TO 1812 PROTEINS IN 205 SPECIES ARCHAE - 0 BACTERIA - 115 METAZOA - 903 FUNGI - 423 PLANTS - 100 VIRUSES - 53 OTHER EUKARYOTES - 853 (SOURCE NCBI BLINK)
AT2G19540	Predicted Affinity Capture-MS	FSW = 0.0176	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G39840	Predicted Affinity Capture-MS	FSW = 0.0427	Unknown	TOPP4 PROTEIN SERINE/THREONINE PHOSPHATASE
AT3G16840	Predicted Affinity Capture-MS	FSW = 0.1175	Unknown	ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT3G18740	Predicted Affinity Capture-MS	FSW = 0.4544	Unknown	60S RIBOSOMAL PROTEIN L30 (RPL30C)
AT3G22480	Predicted Synthetic Lethality interaction prediction	FSW = 0.0171	Unknown	PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT3G23390	Predicted Affinity Capture-MS	FSW = 0.3312	Unknown	60S RIBOSOMAL PROTEIN L36A/L44 (RPL36AA)
AT3G24830	Predicted Affinity Capture-MS	FSW = 0.4010	Unknown	60S RIBOSOMAL PROTEIN L13A (RPL13AB)
AT3G51270	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1799	Unknown	ATP BINDING / CATALYTIC/ PROTEIN SERINE/THREONINE KINASE
AT3G56150	Predicted Affinity Capture-MS	FSW = 0.1153	Unknown	EIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3C) TRANSLATION INITIATION FACTOR
AT3G60240	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0729	Unknown	EIF4G (EUKARYOTIC TRANSLATION INITIATION FACTOR 4G) TRANSLATION INITIATION FACTOR
AT4G11820	Predicted Affinity Capture-MS	FSW = 0.0495	Unknown	MVA1 ACETYL-COA C-ACETYLTRANSFERASE/ HYDROXYMETHYLGLUTARYL-COA SYNTHASE
AT4G18905	Predicted Affinity Capture-MS	FSW = 0.0127	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT4G19210	Predicted Affinity Capture-MS	FSW = 0.2351	Unknown	ATRLI2 TRANSPORTER
AT4G30991	Predicted Affinity Capture-MS	FSW = 0.1499	Unknown	ATRLI2 TRANSPORTER
AT5G08420	Predicted Affinity Capture-MS	FSW = 0.2349	Unknown	RNA BINDING
AT5G23290	Predicted Synthetic Lethality interaction prediction	FSW = 0.0116	Unknown	PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G41190	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0684	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G49510	Predicted Synthetic Lethality interaction prediction	FSW = 0.0115	Unknown	PDF3 (PREFOLDIN 3) UNFOLDED PROTEIN BINDING
AT5G66100	Predicted Affinity Capture-MS	FSW = 0.1137	Unknown	LA DOMAIN-CONTAINING PROTEIN
AT2G40430	Predicted Affinity Capture-MS	FSW = 0.0797	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TUMOR SUPPRESSOR PROTEIN GLTSCR2 (INTERPROIPR011211) P60-LIKE (INTERPROIPR011687) HAS 601 BLAST HITS TO 544 PROTEINS IN 148 SPECIES ARCHAE - 0 BACTERIA - 22 METAZOA - 201 FUNGI - 103 PLANTS - 32 VIRUSES - 0 OTHER EUKARYOTES - 243 (SOURCE NCBI BLINK)
AT3G55280	Predicted Affinity Capture-MS	FSW = 0.3512	Unknown	RPL23AB (RIBOSOMAL PROTEIN L23AB) RNA BINDING / NUCLEOTIDE BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G29400	Predicted Affinity Capture-MS	FSW = 0.0161	Unknown	TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1) PROTEIN SERINE/THREONINE PHOSPHATASE
AT3G22860	Predicted Affinity Capture-MS	FSW = 0.0501	Unknown	TIF3C2 TRANSLATION INITIATION FACTOR
AT1G21160	Predicted Affinity Capture-MS	FSW = 0.1192	Unknown	GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT3G54470	Predicted two hybrid	FSW = 0.0249	Unknown	URIDINE 5-MONOPHOSPHATE SYNTHASE / UMP SYNTHASE (PYRE-F) (UMPS)
AT2G25700	Predicted two hybrid	FSW = 0.0086	Unknown	ASK3 (ARABIDOPSIS SKP1-LIKE 3) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G59850	Predicted Gene fusion method Phylogenetic profile method Co-expression	FSW = 0.0731	Unknown	40S RIBOSOMAL PROTEIN S15A (RPS15AF)
AT3G46040	Predicted Gene fusion method Phylogenetic profile method Co-expression	FSW = 0.1008	Unknown	RPS15AD (RIBOSOMAL PROTEIN S15A D) STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G19720	Predicted Phylogenetic profile method Co-expression	FSW = 0.0637	Unknown	RPS15AB (RIBOSOMAL PROTEIN S15A B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G39590	Predicted Phylogenetic profile method Co-expression	FSW = 0.0275	Unknown	40S RIBOSOMAL PROTEIN S15A (RPS15AC)

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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AT1G07770 - ( RPS15A (ribosomal protein s15a) structural constituent of ribosome )

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