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AT2G37270 - ( ATRPS5B (RIBOSOMAL PROTEIN 5B) structural constituent of ribosome )

137 Proteins interacs with AT2G37270

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT3G04920	Predicted Affinity Capture-MS	FSW = 0.4433	Class C: vacuole plasma membrane	40S RIBOSOMAL PROTEIN S24 (RPS24A)
AT3G49910	Predicted Affinity Capture-MS	FSW = 0.3286	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L26 (RPL26A)
AT2G18020	Predicted Affinity Capture-MS	FSW = 0.3892	Class C: vacuole plasma membrane	EMB2296 (EMBRYO DEFECTIVE 2296) STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G31700	Predicted Affinity Capture-MS	FSW = 0.3794	Class C: vacuole plasma membrane	RPS6 (RIBOSOMAL PROTEIN S6) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G09630	Predicted Affinity Capture-MS	FSW = 0.2888	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT2G42740	Predicted Affinity Capture-MS	FSW = 0.4568	Class C: vacuole plasma membrane	RPL16A STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G09200	Predicted Affinity Capture-MS	FSW = 0.2292	Class C: vacuole plasma membrane	60S ACIDIC RIBOSOMAL PROTEIN P0 (RPP0B)
AT2G36160	Predicted Affinity Capture-MS	FSW = 0.1132	Class C: vacuole plasma membrane	40S RIBOSOMAL PROTEIN S14 (RPS14A)
AT2G17360	Predicted Affinity Capture-MS	FSW = 0.2537	Class C: vacuole plasma membrane	40S RIBOSOMAL PROTEIN S4 (RPS4A)
AT1G67430	Predicted Affinity Capture-MS	FSW = 0.4632	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L17 (RPL17B)
AT3G49010	Predicted Affinity Capture-MS	FSW = 0.3182	Class C: vacuole plasma membrane	ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1) STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G34480	Predicted Affinity Capture-MS	FSW = 0.2846	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L18A (RPL18AB)
AT1G07770	Predicted Affinity Capture-MS	FSW = 0.4109	Class C: vacuole plasma membrane	RPS15A (RIBOSOMAL PROTEIN S15A) STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G67500	Predicted Affinity Capture-MS	FSW = 0.0302	Class C: vacuole	VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2) VOLTAGE-GATED ANION CHANNEL
AT5G15200	Predicted Affinity Capture-MS biochemical fluorescence acceptor donor pair fluorescence acceptor donor pair Synthetic Lethality	FSW = 0.4429	Class C: vacuole	40S RIBOSOMAL PROTEIN S9 (RPS9B)
AT2G47610	Predicted Affinity Capture-MS	FSW = 0.2925	Class C: vacuole	60S RIBOSOMAL PROTEIN L7A (RPL7AA)
AT3G47520	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0417	Class C: vacuole	MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT5G09590	Predicted interologs mapping	FSW = 0.0275	Class C: vacuole	MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT1G33140	Predicted Affinity Capture-MS	FSW = 0.3852	Class C: vacuole	PGY2 (PIGGYBACK2) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G66580	Predicted Affinity Capture-MS	FSW = 0.3932	Class C: vacuole	60S RIBOSOMAL PROTEIN L10 (RPL10C)
AT2G21580	Predicted Affinity Capture-MS	FSW = 0.1040	Class C: vacuole	40S RIBOSOMAL PROTEIN S25 (RPS25B)
AT1G34030	Predicted Affinity Capture-MS	FSW = 0.2022	Class C: vacuole	40S RIBOSOMAL PROTEIN S18 (RPS18B)
AT5G25780	Predicted Affinity Capture-MS	FSW = 0.0784	Class C: vacuole	EIF3B-2 (EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2) NUCLEIC ACID BINDING / PROTEIN BINDING / TRANSLATION INITIATION FACTOR
AT5G01410	Predicted synthetic growth defect	FSW = 0.0560	Class C: plasma membrane	RSR4 (REDUCED SUGAR RESPONSE 4) PROTEIN HETERODIMERIZATION/ PROTEIN HOMODIMERIZATION
AT5G20290	Predicted Affinity Capture-MS	FSW = 0.3502	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S8 (RPS8A)
AT1G48830	Predicted Affinity Capture-MS	FSW = 0.3833	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S7 (RPS7A)
AT2G09990	Predicted Affinity Capture-MS	FSW = 0.4637	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S16 (RPS16A)
AT3G11940	Predicted Gene fusion method Phylogenetic profile method	FSW = 0.0225	Class C: plasma membrane	ATRPS5A (RIBOSOMAL PROTEIN 5A) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G58510	Predicted Affinity Capture-MS	FSW = 0.1649	Class C: plasma membrane	DEAD BOX RNA HELICASE PUTATIVE (RH11)
AT2G45710	Predicted Synthetic Lethality	FSW = 0.0872	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S27 (RPS27A)
AT3G11510	Predicted Affinity Capture-MS	FSW = 0.5159	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S14 (RPS14B)
AT5G39740	Predicted Affinity Capture-MS	FSW = 0.1611	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L5 (RPL5B)
AT2G27710	Predicted Affinity Capture-MS	FSW = 0.3349	Class C: plasma membrane	60S ACIDIC RIBOSOMAL PROTEIN P2 (RPP2B)
AT2G33370	Predicted Affinity Capture-MS	FSW = 0.0560	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L23 (RPL23B)
AT2G37190	Predicted Affinity Capture-MS	FSW = 0.3967	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L12 (RPL12A)
AT4G00100	Predicted Affinity Capture-MS	FSW = 0.4828	Class C: plasma membrane	ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A) STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G34670	Predicted Affinity Capture-MS	FSW = 0.4044	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S3A (RPS3AB)
AT3G09740	Predicted interologs mapping	FSW = 0.0080	Class C: plasma membrane	SYP71 (SYNTAXIN OF PLANTS 71) PROTEIN TRANSPORTER
AT1G75170	Predicted interologs mapping	FSW = 0.0351	Class C: plasma membrane	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT2G37600	Predicted Affinity Capture-MS	FSW = 0.4002	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L36 (RPL36A)
AT5G46430	Predicted Affinity Capture-MS	FSW = 0.3170	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L32 (RPL32B)
AT5G03540	Predicted Synthetic Rescue Synthetic Rescue Phenotypic Suppression interologs mapping Phenotypic Suppression Synthetic Rescue	FSW = 0.1041	Class C: plasma membrane	ATEXO70A1 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1) PROTEIN BINDING
AT3G11400	Predicted Affinity Capture-MS	FSW = 0.0992	Class C: plasma membrane	EUKARYOTIC TRANSLATION INITIATION FACTOR 3G / EIF3G
AT4G35950	Predicted Affinity Capture-Western Affinity Capture-Western biochemical Affinity Capture-MS two hybrid Phenotypic Suppression	FSW = 0.0145	Class C: plasma membrane	ARAC6 (ARABIDOPSIS RAC-LIKE 6) GTP BINDING
AT5G58800	Predicted Reconstituted Complex	FSW = 0.0428	Class C: plasma membrane	QUINONE REDUCTASE FAMILY PROTEIN
AT5G62300	Predicted Affinity Capture-MS	FSW = 0.0676	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT1G70600	Predicted Affinity Capture-MS	FSW = 0.4632	Class C: plasma membrane	STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G76810	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1752	Class C: plasma membrane	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 FAMILY PROTEIN / EIF-2 FAMILY PROTEIN
AT4G02230	Predicted Affinity Capture-MS	FSW = 0.3419	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L19 (RPL19C)
AT4G15000	Predicted Affinity Capture-MS	FSW = 0.3618	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L27 (RPL27C)
AT3G53870	Predicted Affinity Capture-MS	FSW = 0.4030	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S3 (RPS3B)
AT5G22440	Predicted Affinity Capture-MS	FSW = 0.3405	Unknown	60S RIBOSOMAL PROTEIN L10A (RPL10AC)
AT4G33650	Predicted biochemical	FSW = 0.0248	Unknown	DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING
AT1G09830	Predicted Affinity Capture-MS	FSW = 0.0150	Unknown	PHOSPHORIBOSYLAMINE--GLYCINE LIGASE (PUR2)
AT1G19660	Predicted Synthetic Lethality	FSW = 0.0301	Unknown	WOUND-RESPONSIVE FAMILY PROTEIN
AT3G13580	Predicted Affinity Capture-MS	FSW = 0.3156	Unknown	60S RIBOSOMAL PROTEIN L7 (RPL7D)
AT5G53460	Predicted Affinity Capture-MS	FSW = 0.0357	Unknown	GLT1 GLUTAMATE SYNTHASE (NADH)
AT2G33340	Predicted Co-purification	FSW = 0.0598	Unknown	NUCLEOTIDE BINDING / UBIQUITIN-PROTEIN LIGASE
AT1G77840	Predicted Affinity Capture-MS	FSW = 0.1330	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR 5 PUTATIVE / EIF-5 PUTATIVE
AT5G67270	Predicted Affinity Capture-MS	FSW = 0.0060	Unknown	ATEB1C (MICROTUBULE END BINDING PROTEIN 1) MICROTUBULE BINDING
AT1G74060	Predicted Affinity Capture-MS	FSW = 0.3603	Unknown	60S RIBOSOMAL PROTEIN L6 (RPL6B)
AT2G34450	Predicted two hybrid Affinity Capture-Western	FSW = 0.0888	Unknown	HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN
AT3G13445	Predicted interologs mapping Reconstituted Complex interologs mapping Phenotypic Suppression Synthetic Lethality	FSW = 0.0510	Unknown	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT4G17390	Predicted Affinity Capture-MS	FSW = 0.4186	Unknown	60S RIBOSOMAL PROTEIN L15 (RPL15B)
AT4G29390	Predicted Affinity Capture-MS	FSW = 0.2337	Unknown	40S RIBOSOMAL PROTEIN S30 (RPS30B)
AT5G15520	Predicted Affinity Capture-MS	FSW = 0.1178	Unknown	40S RIBOSOMAL PROTEIN S19 (RPS19B)
AT2G41840	Predicted Affinity Capture-MS	FSW = 0.1587	Unknown	40S RIBOSOMAL PROTEIN S2 (RPS2C)
AT3G53020	Predicted Affinity Capture-MS	FSW = 0.2495	Unknown	STV1 (SHORT VALVE1) STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G58420	Predicted Affinity Capture-MS	FSW = 0.4182	Unknown	40S RIBOSOMAL PROTEIN S4 (RPS4D)
AT1G63810	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1248	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NRAP PROTEIN (INTERPROIPR005554) HAS 268 BLAST HITS TO 263 PROTEINS IN 124 SPECIES ARCHAE - 3 BACTERIA - 0 METAZOA - 116 FUNGI - 89 PLANTS - 17 VIRUSES - 0 OTHER EUKARYOTES - 43 (SOURCE NCBI BLINK)
AT3G12860	Predicted Affinity Capture-MS	FSW = 0.1055	Unknown	NUCLEOLAR PROTEIN NOP56 PUTATIVE
AT1G04510	Predicted Co-purification	FSW = 0.0212	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G18130	Predicted Affinity Capture-MS	FSW = 0.0633	Unknown	RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C) NUCLEOTIDE BINDING
AT4G05410	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0799	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT5G66540	Predicted Affinity Capture-MS	FSW = 0.1321	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RRNA PROCESSING LOCATED IN CYTOSOL NUCLEOLUS NUCLEUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 12 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN COMPLEX SUBUNIT MPP10P (INTERPROIPR012173) MPP10 PROTEIN (INTERPROIPR007151) HAS 76240 BLAST HITS TO 38667 PROTEINS IN 1479 SPECIES ARCHAE - 252 BACTERIA - 6537 METAZOA - 31185 FUNGI - 9935 PLANTS - 3937 VIRUSES - 750 OTHER EUKARYOTES - 23644 (SOURCE NCBI BLINK)
AT3G18600	Predicted two hybrid	FSW = 0.0262	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT1G53530	Predicted Synthetic Lethality	FSW = 0.0953	Unknown	SIGNAL PEPTIDASE I FAMILY PROTEIN
AT2G47510	Predicted Synthetic Lethality	FSW = 0.0622	Unknown	FUM1 (FUMARASE 1) CATALYTIC/ FUMARATE HYDRATASE
AT2G14580	Predicted interologs mapping Synthetic Lethality	FSW = 0.0607	Unknown	ATPRB1
AT2G14610	Predicted Synthetic Lethality	FSW = 0.0588	Unknown	PR1 (PATHOGENESIS-RELATED GENE 1)
AT1G01020	Predicted Co-purification Affinity Capture-Western Co-purification	FSW = 0.0820	Unknown	ARV1
AT5G09500	Predicted Affinity Capture-MS	FSW = 0.3301	Unknown	40S RIBOSOMAL PROTEIN S15 (RPS15C)
AT1G80830	Predicted interologs mapping	FSW = 0.0063	Unknown	NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1) INORGANIC ANION TRANSMEMBRANE TRANSPORTER/ MANGANESE ION TRANSMEMBRANE TRANSPORTER/ METAL ION TRANSMEMBRANE TRANSPORTER
AT4G17620	Predicted Affinity Capture-MS	FSW = 0.1783	Unknown	GLYCINE-RICH PROTEIN
AT5G59240	Predicted Affinity Capture-MS	FSW = 0.3294	Unknown	40S RIBOSOMAL PROTEIN S8 (RPS8B)
AT2G47990	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0672	Unknown	SWA1 (SLOW WALKER1) NUCLEOTIDE BINDING
AT1G10490	Predicted Affinity Capture-MS	FSW = 0.2284	Unknown	UNKNOWN PROTEIN
AT5G52650	Predicted Affinity Capture-MS	FSW = 0.0612	Unknown	40S RIBOSOMAL PROTEIN S10 (RPS10C)
AT1G61580	Predicted Affinity Capture-MS	FSW = 0.3576	Unknown	RPL3B (R-PROTEIN L3 B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G30800	Predicted Affinity Capture-MS	FSW = 0.2818	Unknown	40S RIBOSOMAL PROTEIN S11 (RPS11B)
AT5G56710	Predicted Affinity Capture-MS	FSW = 0.3154	Unknown	60S RIBOSOMAL PROTEIN L31 (RPL31C)
AT4G26840	Predicted Affinity Capture-MS	FSW = 0.0595	Unknown	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG
AT5G63960	Predicted Affinity Capture-Western interologs mapping	FSW = 0.0874	Unknown	EMB2780 (EMBRYO DEFECTIVE 2780) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT1G09230	Predicted two hybrid	FSW = 0.0250	Unknown	RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT5G54750	Predicted two hybrid	FSW = 0.0100	Unknown	TRANSPORT PROTEIN PARTICLE (TRAPP) COMPONENT BET3 PUTATIVE
AT1G08260	Predicted Synthetic Lethality	FSW = 0.0436	Unknown	TIL1 (TILTED 1) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING
AT1G59580	Predicted Synthetic Lethality Affinity Capture-Western two hybrid two hybrid Reconstituted Complex Synthetic Lethality	FSW = 0.0384	Unknown	ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2) MAP KINASE/ KINASE/ PROTEIN KINASE
AT2G21890	Predicted Affinity Capture-Western	FSW = 0.0812	Unknown	CAD3 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 3) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT2G23070	Predicted Affinity Capture-Western	FSW = 0.0188	Unknown	CASEIN KINASE II ALPHA CHAIN PUTATIVE
AT2G30650	Predicted interologs mapping	FSW = 0.0873	Unknown	CATALYTIC
AT1G03530	Predicted Affinity Capture-MS	FSW = 0.1513	Unknown	NAF1 (NUCLEAR ASSEMBLY FACTOR 1)
AT1G15440	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1427	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G34340	Predicted Synthetic Lethality	FSW = 0.0899	Unknown	ESTERASE/LIPASE/THIOESTERASE FAMILY PROTEIN
AT1G42440	Predicted Affinity Capture-MS	FSW = 0.1008	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RIBOSOME BIOGENESIS LOCATED IN NUCLEUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S AARP2CN (INTERPROIPR012948) PROTEIN OF UNKNOWN FUNCTION DUF663 (INTERPROIPR007034) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G067201) HAS 2447 BLAST HITS TO 1812 PROTEINS IN 205 SPECIES ARCHAE - 0 BACTERIA - 115 METAZOA - 903 FUNGI - 423 PLANTS - 100 VIRUSES - 53 OTHER EUKARYOTES - 853 (SOURCE NCBI BLINK)
AT1G49520	Predicted Co-purification	FSW = 0.0471	Unknown	SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN
AT1G57660	Predicted Affinity Capture-MS	FSW = 0.3050	Unknown	60S RIBOSOMAL PROTEIN L21 (RPL21E)
AT1G73810	Predicted interologs mapping	FSW = 0.0877	Unknown	UNKNOWN PROTEIN
AT2G46280	Predicted two hybrid Reconstituted Complex two hybrid	FSW = 0.1261	Unknown	TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1) NUCLEOTIDE BINDING / PROTEIN BINDING
AT3G11450	Predicted Affinity Capture-MS	FSW = 0.0691	Unknown	DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN / CELL DIVISION PROTEIN-RELATED
AT3G12670	Predicted Affinity Capture-MS	FSW = 0.0443	Unknown	EMB2742 (EMBRYO DEFECTIVE 2742) CTP SYNTHASE/ CATALYTIC
AT3G13060	Predicted Affinity Capture-MS	FSW = 0.0085	Unknown	ECT5 FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S YT521-B-LIKE PROTEIN (INTERPROIPR007275) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS ECT2 PROTEIN BINDING (TAIRAT3G134601) HAS 1007 BLAST HITS TO 965 PROTEINS IN 147 SPECIES ARCHAE - 0 BACTERIA - 8 METAZOA - 528 FUNGI - 103 PLANTS - 235 VIRUSES - 0 OTHER EUKARYOTES - 133 (SOURCE NCBI BLINK)
AT3G18740	Predicted Affinity Capture-MS	FSW = 0.3725	Unknown	60S RIBOSOMAL PROTEIN L30 (RPL30C)
AT3G23390	Predicted Affinity Capture-MS	FSW = 0.3633	Unknown	60S RIBOSOMAL PROTEIN L36A/L44 (RPL36AA)
AT3G24080	Predicted Affinity Capture-MS	FSW = 0.1243	Unknown	KRR1 FAMILY PROTEIN
AT3G24830	Predicted Affinity Capture-MS	FSW = 0.3281	Unknown	60S RIBOSOMAL PROTEIN L13A (RPL13AB)
AT3G58830	Predicted Phenotypic Enhancement	FSW = 0.0044	Unknown	HALOACID DEHALOGENASE (HAD) SUPERFAMILY PROTEIN
AT3G60245	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western two hybrid	FSW = 0.1244	Unknown	60S RIBOSOMAL PROTEIN L37A (RPL37AC)
AT4G02120	Predicted interologs mapping Reconstituted Complex	FSW = 0.1200	Unknown	CTP SYNTHASE PUTATIVE / UTP--AMMONIA LIGASE PUTATIVE
AT4G19880	Predicted Synthetic Lethality	FSW = 0.0401	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RESPONSE TO CADMIUM ION LOCATED IN CHLOROPLAST EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S GLUTATHIONE S-TRANSFERASE PREDICTED (INTERPROIPR016639) GLUTATHIONE S-TRANSFERASE C-TERMINAL (INTERPROIPR004046) GLUTATHIONE S-TRANSFERASE C-TERMINAL-LIKE (INTERPROIPR010987) GLUTATHIONE S-TRANSFERASE/CHLORIDE CHANNEL C-TERMINAL (INTERPROIPR017933) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G450201) HAS 1635 BLAST HITS TO 1635 PROTEINS IN 489 SPECIES ARCHAE - 12 BACTERIA - 905 METAZOA - 23 FUNGI - 158 PLANTS - 57 VIRUSES - 0 OTHER EUKARYOTES - 480 (SOURCE NCBI BLINK)
AT4G27640	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0269	Unknown	IMPORTIN BETA-2 SUBUNIT FAMILY PROTEIN
AT4G38630	Predicted Affinity Capture-MS	FSW = 0.0538	Unknown	RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR
AT5G08420	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1912	Unknown	RNA BINDING
AT5G19360	Predicted Affinity Capture-MS	FSW = 0.0204	Unknown	CPK34 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G42190	Predicted Affinity Capture-MS	FSW = 0.0038	Unknown	ASK2 (ARABIDOPSIS SKP1-LIKE 2) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G46280	Predicted Affinity Capture-Western interologs mapping Synthetic Lethality	FSW = 0.0610	Unknown	DNA REPLICATION LICENSING FACTOR PUTATIVE
AT5G52200	Predicted biochemical interologs mapping Synthetic Rescue Phenotypic Suppression interologs mapping	FSW = 0.0250	Unknown	UNKNOWN PROTEIN
AT2G47420	Predicted Affinity Capture-MS	FSW = 0.0773	Unknown	DIMETHYLADENOSINE TRANSFERASE PUTATIVE
AT3G12490	Predicted Synthetic Lethality	FSW = 0.1032	Unknown	CYSTEINE PROTEASE INHIBITOR PUTATIVE / CYSTATIN PUTATIVE
AT3G55280	Predicted Affinity Capture-MS	FSW = 0.3781	Unknown	RPL23AB (RIBOSOMAL PROTEIN L23AB) RNA BINDING / NUCLEOTIDE BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G59290	Predicted Synthetic Lethality	FSW = 0.0266	Unknown	EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN
AT4G05320	Predicted interologs mapping	FSW = 0.0030	Unknown	UBQ10 (POLYUBIQUITIN 10) PROTEIN BINDING
AT4G25850	Predicted interologs mapping synthetic growth defect	FSW = 0.0159	Unknown	ORP4B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4B) OXYSTEROL BINDING
AT4G36630	Predicted interologs mapping	FSW = 0.0510	Unknown	EMB2754 (EMBRYO DEFECTIVE 2754) BINDING / SMALL GTPASE REGULATOR
AT1G36730	Predicted Affinity Capture-MS	FSW = 0.0428	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR 5 PUTATIVE / EIF-5 PUTATIVE
AT1G30820	Predicted Affinity Capture-MS	FSW = 0.0450	Unknown	CTP SYNTHASE PUTATIVE / UTP--AMMONIA LIGASE PUTATIVE
AT1G21160	Predicted Affinity Capture-MS	FSW = 0.0438	Unknown	GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT1G04480	Predicted Affinity Capture-MS	FSW = 0.0416	Unknown	60S RIBOSOMAL PROTEIN L23 (RPL23A)

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT2G37270 - ( ATRPS5B (RIBOSOMAL PROTEIN 5B) structural constituent of ribosome )

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