AT5G66540 - ( FUNCTIONS IN molecular_function unknown INVOLVED IN rRNA processing LOCATED IN cytosol nucleolus nucleus EXPRESSED IN 22 plant structures EXPRESSED DURING 12 growth stages CONTAINS InterPro DOMAIN/s U3 small nucleolar ribonucleoprotein complex subunit Mpp10p (InterProIPR012173) Mpp10 protein (InterProIPR007151) Has 76240 Blast hits to 38667 proteins in 1479 species Archae - 252 Bacteria - 6537 Metazoa - 31185 Fungi - 9935 Plants - 3937 Viruses - 750 Other Eukaryotes - 23644 (source NCBI BLink) )

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT4G31700	Predicted Affinity Capture-Western	FSW = 0.1253	Class C: nucleus	RPS6 (RIBOSOMAL PROTEIN S6) STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G15200	Predicted Affinity Capture-Western Affinity Capture-MS	FSW = 0.2329	Class C: nucleus	40S RIBOSOMAL PROTEIN S9 (RPS9B)
AT5G20290	Predicted Affinity Capture-MS	FSW = 0.2764	Class C: nucleus	40S RIBOSOMAL PROTEIN S8 (RPS8A)
AT3G11964	Predicted Affinity Capture-MS	FSW = 0.2515	Class C: nucleus	RNA BINDING
AT3G11510	Predicted Affinity Capture-Western	FSW = 0.1521	Class C: nucleus	40S RIBOSOMAL PROTEIN S14 (RPS14B)
AT4G00100	Predicted Affinity Capture-MS	FSW = 0.3884	Class C: nucleus	ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A) STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G04600	Predicted Affinity Capture-MS	FSW = 0.2223	Class C: nucleus	RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT4G25630	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.3554	Class C: nucleus	FIB2 (FIBRILLARIN 2) SNORNA BINDING
AT2G41500	Predicted Affinity Capture-MS	FSW = 0.0373	Class C: nucleus	EMB2776 NUCLEOTIDE BINDING
AT3G05060	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.4618	Class C: nucleus	SAR DNA-BINDING PROTEIN PUTATIVE
AT3G12860	Predicted Affinity Capture-MS	FSW = 0.5187	Class C: nucleus	NUCLEOLAR PROTEIN NOP56 PUTATIVE
AT4G05410	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.6628	Class C: nucleus	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G63780	Predicted interaction prediction two hybrid two hybrid two hybrid two hybrid Affinity Capture-Western two hybrid Reconstituted Complex Affinity Capture-MS in vitro Co-expression	FSW = 0.2833	Class C: nucleus	IMP4
AT1G63810	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.4935	Class C: nucleus	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NRAP PROTEIN (INTERPROIPR005554) HAS 268 BLAST HITS TO 263 PROTEINS IN 124 SPECIES ARCHAE - 3 BACTERIA - 0 METAZOA - 116 FUNGI - 89 PLANTS - 17 VIRUSES - 0 OTHER EUKARYOTES - 43 (SOURCE NCBI BLINK)
AT3G21540	Predicted Affinity Capture-MS Affinity Capture-MS Co-expression	FSW = 0.4636	Class C: nucleus	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G57000	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS	FSW = 0.6159	Class C: nucleus	NUCLEOLAR ESSENTIAL PROTEIN-RELATED
AT2G41840	Predicted Affinity Capture-Western	FSW = 0.0757	Class C: nucleus	40S RIBOSOMAL PROTEIN S2 (RPS2C)
AT2G36160	Predicted Affinity Capture-Western	FSW = 0.0743	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14A)
AT2G17360	Predicted Affinity Capture-MS	FSW = 0.1975	Unknown	40S RIBOSOMAL PROTEIN S4 (RPS4A)
AT2G37270	Predicted Affinity Capture-MS	FSW = 0.1321	Unknown	ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G07770	Predicted Affinity Capture-MS	FSW = 0.1687	Unknown	RPS15A (RIBOSOMAL PROTEIN S15A) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G48830	Predicted Affinity Capture-Western	FSW = 0.0962	Unknown	40S RIBOSOMAL PROTEIN S7 (RPS7A)
AT1G58380	Predicted Affinity Capture-Western	FSW = 0.0562	Unknown	XW6 STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G06530	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.5369	Unknown	BINDING
AT5G52640	Predicted Affinity Capture-MS	FSW = 0.0090	Unknown	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT5G17310	Predicted Affinity Capture-MS	FSW = 0.0949	Unknown	UTP--GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE PUTATIVE / UDP-GLUCOSE PYROPHOSPHORYLASE PUTATIVE / UGPASE PUTATIVE
AT3G03250	Predicted Affinity Capture-MS	FSW = 0.1867	Unknown	UGP (UDP-GLUCOSE PYROPHOSPHORYLASE) UTPGLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE/ NUCLEOTIDYLTRANSFERASE
AT4G30990	Predicted Affinity Capture-MS Affinity Capture-Western	FSW = 0.0931	Unknown	BINDING
AT2G47990	Predicted Affinity Capture-MS Affinity Capture-MS Co-expression	FSW = 0.4563	Unknown	SWA1 (SLOW WALKER1) NUCLEOTIDE BINDING
AT3G60360	Predicted Affinity Capture-MS Co-expression	FSW = 0.0271	Unknown	EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14)
AT5G59240	Predicted Affinity Capture-MS	FSW = 0.2471	Unknown	40S RIBOSOMAL PROTEIN S8 (RPS8B)
AT5G22100	Predicted Affinity Capture-MS	FSW = 0.2616	Unknown	RNA CYCLASE FAMILY PROTEIN
AT1G10490	Predicted Affinity Capture-MS	FSW = 0.4438	Unknown	UNKNOWN PROTEIN
AT5G15750	Predicted two hybrid two hybrid Affinity Capture-Western two hybrid Reconstituted Complex Affinity Capture-MS interaction prediction Co-expression	FSW = 0.5826	Unknown	RNA-BINDING S4 DOMAIN-CONTAINING PROTEIN
AT1G06720	Predicted Affinity Capture-MS	FSW = 0.5243	Unknown	INVOLVED IN RIBOSOME BIOGENESIS LOCATED IN NUCLEUS EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S AARP2CN (INTERPROIPR012948) PROTEIN OF UNKNOWN FUNCTION DUF663 (INTERPROIPR007034) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G424401) HAS 7944 BLAST HITS TO 5342 PROTEINS IN 373 SPECIES ARCHAE - 33 BACTERIA - 667 METAZOA - 2609 FUNGI - 1045 PLANTS - 414 VIRUSES - 80 OTHER EUKARYOTES - 3096 (SOURCE NCBI BLINK)
AT2G17250	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Co-expression	FSW = 0.6309	Unknown	EMB2762 (EMBRYO DEFECTIVE 2762)
AT2G34357	Predicted Affinity Capture-MS	FSW = 0.3628	Unknown	BINDING
AT2G34570	Predicted Affinity Capture-Western	FSW = 0.0682	Unknown	MEE21 (MATERNAL EFFECT EMBRYO ARREST 21)
AT2G46230	Predicted Affinity Capture-Western	FSW = 0.0103	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF652 (INTERPROIPR006984) NUCLEOTIDE BINDING PROTEIN PINC (INTERPROIPR006596) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G265301) HAS 493 BLAST HITS TO 493 PROTEINS IN 165 SPECIES ARCHAE - 21 BACTERIA - 0 METAZOA - 192 FUNGI - 143 PLANTS - 53 VIRUSES - 0 OTHER EUKARYOTES - 84 (SOURCE NCBI BLINK)
AT2G47420	Predicted Affinity Capture-MS	FSW = 0.3780	Unknown	DIMETHYLADENOSINE TRANSFERASE PUTATIVE
AT3G13230	Predicted Affinity Capture-MS	FSW = 0.3478	Unknown	RNA BINDING
AT4G04940	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS	FSW = 0.5226	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT4G28450	Predicted Affinity Capture-MS	FSW = 0.5530	Unknown	NUCLEOTIDE BINDING / PROTEIN BINDING
AT4G30991	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western	FSW = 0.6018	Unknown	NUCLEOTIDE BINDING / PROTEIN BINDING
AT5G08420	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.4485	Unknown	RNA BINDING
AT5G14050	Predicted Affinity Capture-Western Affinity Capture-MS Co-expression	FSW = 0.2692	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT5G16750	Predicted Affinity Capture-MS Affinity Capture-MS Co-expression	FSW = 0.3426	Unknown	TOZ (TORMOZEMBRYO DEFECTIVE) NUCLEOTIDE BINDING
AT1G15420	Predicted Affinity Capture-MS Co-expression	FSW = 0.1030	Unknown	UNKNOWN PROTEIN
AT1G15440	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction Co-expression	FSW = 0.3101	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G17690	Predicted Affinity Capture-MS Co-expression	FSW = 0.0325	Unknown	UNKNOWN PROTEIN
AT1G31660	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction Co-expression	FSW = 0.4935	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S BYSTIN (INTERPROIPR007955) HAS 370 BLAST HITS TO 362 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 7 METAZOA - 139 FUNGI - 93 PLANTS - 32 VIRUSES - 0 OTHER EUKARYOTES - 99 (SOURCE NCBI BLINK)
AT1G69070	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Co-expression	FSW = 0.5791	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NOP14-LIKE PROTEIN (INTERPROIPR007276) HAS 64668 BLAST HITS TO 30830 PROTEINS IN 1152 SPECIES ARCHAE - 207 BACTERIA - 18692 METAZOA - 20758 FUNGI - 6782 PLANTS - 2177 VIRUSES - 523 OTHER EUKARYOTES - 15529 (SOURCE NCBI BLINK)
AT1G72320	Predicted Affinity Capture-MS	FSW = 0.3689	Unknown	APUM23 (ARABIDOPSIS PUMILIO 23) RNA BINDING / BINDING
AT2G43650	Predicted interaction prediction Affinity Capture-MS two hybrid Co-expression	FSW = 0.0974	Unknown	EMB2777 (EMBRYO DEFECTIVE 2777)
AT3G10530	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction Co-expression	FSW = 0.4636	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G56510	Predicted Affinity Capture-MS	FSW = 0.3182	Unknown	TBP-BINDING PROTEIN PUTATIVE
AT4G02400	Predicted Affinity Capture-MS Co-expression	FSW = 0.1098	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RRNA PROCESSING LOCATED IN SMALL-SUBUNIT PROCESSOME EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SMALL-SUBUNIT PROCESSOME UTP14 (INTERPROIPR006709) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS U3 RIBONUCLEOPROTEIN (UTP) FAMILY PROTEIN (TAIRAT5G086001) HAS 7412 BLAST HITS TO 4272 PROTEINS IN 301 SPECIES ARCHAE - 10 BACTERIA - 517 METAZOA - 2926 FUNGI - 722 PLANTS - 242 VIRUSES - 149 OTHER EUKARYOTES - 2846 (SOURCE NCBI BLINK)
AT4G07410	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.6530	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT4G28200	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.6499	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RNA PROCESSING LOCATED IN INTRACELLULAR EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S RNA-PROCESSING PROTEIN HAT HELIX (INTERPROIPR003107) U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 (INTERPROIPR013949) HAS 352 BLAST HITS TO 342 PROTEINS IN 144 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 111 FUNGI - 130 PLANTS - 24 VIRUSES - 0 OTHER EUKARYOTES - 87 (SOURCE NCBI BLINK)
AT5G61330	Predicted Affinity Capture-MS	FSW = 0.2160	Unknown	RRNA PROCESSING PROTEIN-RELATED
AT1G27470	Predicted Affinity Capture-MS	FSW = 0.3810	Unknown	TRANSDUCIN-RELATED / WD-40 REPEAT PROTEIN-RELATED
AT2G16090	Predicted two hybrid	FSW = 0.0184	Unknown	ZINC FINGER PROTEIN-RELATED