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AT3G47520 - ( MDH (MALATE DEHYDROGENASE) L-malate dehydrogenase/ binding / catalytic/ malate dehydrogenase/ oxidoreductase/ oxidoreductase acting on the CH-OH group of donors NAD or NADP as acceptor )

125 Proteins interacs with AT3G47520

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT4G27090	Predicted Phenotypic Enhancement	FSW = 0.1588	Class C: vacuole plastid	60S RIBOSOMAL PROTEIN L14 (RPL14B)
AT2G37270	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0417	Class C: vacuole	ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G36750	Predicted Phenotypic Enhancement	FSW = 0.1364	Class C: vacuole	QUINONE REDUCTASE FAMILY PROTEIN
AT3G08710	Predicted Phenotypic Enhancement	FSW = 0.0896	Class C: vacuole	ATH9 (THIOREDOXIN H-TYPE 9)
AT5G55400	Predicted Affinity Capture-MS	FSW = 0.0141	Class C: vacuole	FIMBRIN-LIKE PROTEIN PUTATIVE
AT1G20630	Predicted Synthetic Rescue Phenotypic Enhancement	FSW = 0.0614	Class C: plastid mitochondrion	CAT1 (CATALASE 1) CATALASE
AT4G35090	Predicted Phenotypic Enhancement	FSW = 0.0822	Class C: plastid mitochondrion	CAT2 (CATALASE 2) CATALASE
AT2G44350	Predicted Reconstituted Complex interaction prediction	FSW = 0.0182	Class C: plastid mitochondrion	ATCS ATP BINDING / ATP CITRATE SYNTHASE/ CITRATE (SI)-SYNTHASE
AT3G55400	Predicted Phenotypic Enhancement	FSW = 0.0929	Class C: plastid mitochondrion	OVA1 (OVULE ABORTION 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ METHIONINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT5G03290	Predicted Phenotypic Suppression	FSW = 0.0178	Class C: plastid mitochondrion	ISOCITRATE DEHYDROGENASE PUTATIVE / NAD+ ISOCITRATE DEHYDROGENASE PUTATIVE
AT4G08870	Predicted interaction prediction	FSW = 0.0159	Class C: plastid mitochondrion	ARGINASE PUTATIVE
AT1G01620	Predicted Phenotypic Enhancement	FSW = 0.0335	Class C: plastid	PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C) WATER CHANNEL
AT1G16030	Predicted Phenotypic Suppression	FSW = 0.0938	Class C: plastid	HSP70B (HEAT SHOCK PROTEIN 70B) ATP BINDING
AT2G22780	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.0341	Class C: plastid	PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT5G09660	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.0824	Class C: plastid	PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) MALATE DEHYDROGENASE
AT3G20550	Predicted Synthetic Rescue	FSW = 0.0093	Class C: plastid	DDL (DAWDLE)
AT5G65430	Predicted Phenotypic Enhancement	FSW = 0.0621	Class C: plastid	GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G55920	Predicted Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1817	Class C: plastid	ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE
AT4G30310	Predicted Affinity Capture-MS	FSW = 0.0364	Class C: plastid	RIBITOL KINASE PUTATIVE
AT1G19660	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0106	Class C: plastid	WOUND-RESPONSIVE FAMILY PROTEIN
AT3G54670	Predicted Phenotypic Enhancement	FSW = 0.0565	Class C: plastid	TTN8 (TITAN8) ATP BINDING / TRANSPORTER
AT5G53480	Predicted Synthetic Lethality	FSW = 0.0199	Class C: plastid	IMPORTIN BETA-2 PUTATIVE
AT2G20800	Predicted Phenotypic Enhancement	FSW = 0.0447	Class C: mitochondrion	NDB4 (NAD(P)H DEHYDROGENASE B4) NADH DEHYDROGENASE
AT2G19860	Predicted Affinity Capture-MS	FSW = 0.0236	Class C: mitochondrion	HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT5G59880	Predicted Phenotypic Suppression	FSW = 0.0140	Class C: mitochondrion	ADF3 (ACTIN DEPOLYMERIZING FACTOR 3) ACTIN BINDING
AT5G41670	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0259	Class C: mitochondrion	6-PHOSPHOGLUCONATE DEHYDROGENASE FAMILY PROTEIN
AT3G15020	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.0411	Class C: mitochondrion	MALATE DEHYDROGENASE (NAD) MITOCHONDRIAL PUTATIVE
AT2G47510	Predicted interologs mapping	FSW = 0.0353	Class C: mitochondrion	FUM1 (FUMARASE 1) CATALYTIC/ FUMARATE HYDRATASE
AT1G53240	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.1759	Class C: mitochondrion	MALATE DEHYDROGENASE (NAD) MITOCHONDRIAL
AT1G74560	Predicted Synthetic Lethality	FSW = 0.0330	Unknown	NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING
AT4G36640	Predicted Phenotypic Enhancement	FSW = 0.0709	Unknown	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT5G52640	Predicted synthetic growth defect	FSW = 0.0099	Unknown	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT3G20920	Predicted Phenotypic Enhancement	FSW = 0.0923	Unknown	TRANSLOCATION PROTEIN-RELATED
AT1G04750	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.0465	Unknown	VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT4G18760	Predicted Phenotypic Enhancement	FSW = 0.0735	Unknown	ATRLP51 (RECEPTOR LIKE PROTEIN 51) PROTEIN BINDING
AT1G76810	Predicted Affinity Capture-MS	FSW = 0.0134	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 FAMILY PROTEIN / EIF-2 FAMILY PROTEIN
AT5G19990	Predicted Affinity Capture-MS	FSW = 0.0200	Unknown	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A) ATPASE
AT5G26340	Predicted Phenotypic Enhancement	FSW = 0.1437	Unknown	MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT4G33090	Predicted Affinity Capture-MS	FSW = 0.0438	Unknown	APM1 (AMINOPEPTIDASE M1) AMINOPEPTIDASE
AT2G39480	Predicted Phenotypic Enhancement	FSW = 0.1691	Unknown	PGP6 (P-GLYCOPROTEIN 6) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT5G65940	Predicted Phenotypic Enhancement	FSW = 0.1039	Unknown	CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1) 3-HYDROXYISOBUTYRYL-COA HYDROLASE
AT5G57015	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0076	Unknown	CKL12 (CASEIN KINASE I-LIKE 12) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT2G34450	Predicted Phenotypic Enhancement	FSW = 0.2379	Unknown	HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN
AT3G13445	Predicted Phenotypic Enhancement	FSW = 0.0887	Unknown	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT3G07260	Predicted Phenotypic Enhancement	FSW = 0.0888	Unknown	FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN / FHA DOMAIN-CONTAINING PROTEIN
AT1G77950	Predicted Phenotypic Suppression	FSW = 0.0390	Unknown	AGL67 (AGAMOUS-LIKE 67) TRANSCRIPTION FACTOR
AT1G03190	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0105	Unknown	UVH6 (ULTRAVIOLET HYPERSENSITIVE 6) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ ATP-DEPENDENT HELICASE/ DNA BINDING / HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING
AT2G15430	Predicted Phenotypic Enhancement	FSW = 0.0496	Unknown	NRPB3 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT2G38880	Predicted Affinity Capture-MS	FSW = 0.0173	Unknown	NF-YB1 (NUCLEAR FACTOR Y SUBUNIT B1) TRANSCRIPTION FACTOR
AT2G18760	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0068	Unknown	CHR8 (CHROMATIN REMODELING 8) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT3G19210	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0051	Unknown	ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G13650	Predicted Affinity Capture-MS	FSW = 0.0247	Unknown	GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT1G01020	Predicted Co-purification	FSW = 0.0801	Unknown	ARV1
AT1G62800	Predicted Synthetic Rescue Phenotypic Enhancement Synthetic Rescue Phenotypic Enhancement Synthetic Rescue	FSW = 0.0810	Unknown	ASP4 (ASPARTATE AMINOTRANSFERASE 4) CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE/ TRANSFERASE TRANSFERRING NITROGENOUS GROUPS
AT4G02570	Predicted Phenotypic Enhancement	FSW = 0.0111	Unknown	ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) PROTEIN BINDING
AT2G43460	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0351	Unknown	60S RIBOSOMAL PROTEIN L38 (RPL38A)
AT5G28060	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1818	Unknown	40S RIBOSOMAL PROTEIN S24 (RPS24B)
AT3G10610	Predicted Phenotypic Enhancement	FSW = 0.0127	Unknown	40S RIBOSOMAL PROTEIN S17 (RPS17C)
AT5G40820	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0041	Unknown	ATRAD3 BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / PROTEIN SERINE/THREONINE KINASE
AT5G47880	Predicted Phenotypic Enhancement	FSW = 0.0529	Unknown	ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT1G02630	Predicted Phenotypic Suppression	FSW = 0.0735	Unknown	EQUILIBRATIVE NUCLEOSIDE TRANSPORTER PUTATIVE (ENT8)
AT1G09270	Predicted Affinity Capture-MS	FSW = 0.0426	Unknown	IMPA-4 (IMPORTIN ALPHA ISOFORM 4) BINDING / PROTEIN TRANSPORTER
AT1G20610	Predicted interologs mapping	FSW = 0.0198	Unknown	CYCB23 (CYCLIN B23) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G33040	Predicted synthetic growth defect	FSW = 0.0335	Unknown	NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5)
AT1G34340	Predicted Phenotypic Enhancement	FSW = 0.1071	Unknown	ESTERASE/LIPASE/THIOESTERASE FAMILY PROTEIN
AT1G49520	Predicted Phenotypic Enhancement	FSW = 0.1647	Unknown	SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN
AT1G55255	Predicted Phenotypic Enhancement	FSW = 0.0177	Unknown	SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN
AT1G57620	Predicted Phenotypic Suppression	FSW = 0.0561	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G60710	Predicted Phenotypic Suppression	FSW = 0.0266	Unknown	ATB2 OXIDOREDUCTASE
AT1G60730	Predicted Synthetic Lethality	FSW = 0.0303	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G61670	Predicted Phenotypic Enhancement	FSW = 0.2647	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM INTEGRAL TO MEMBRANE CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G109801) HAS 473 BLAST HITS TO 471 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 242 FUNGI - 99 PLANTS - 92 VIRUSES - 0 OTHER EUKARYOTES - 38 (SOURCE NCBI BLINK)
AT2G01830	Predicted Phenotypic Enhancement	FSW = 0.1295	Unknown	WOL (WOODEN LEG) CYTOKININ RECEPTOR/ OSMOSENSOR/ PHOSPHOPROTEIN PHOSPHATASE/ PROTEIN HISTIDINE KINASE
AT2G24960	Predicted Phenotypic Enhancement	FSW = 0.1315	Unknown	UNKNOWN PROTEIN
AT2G27340	Predicted Phenotypic Enhancement	FSW = 0.1286	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN CONTAINS INTERPRO DOMAIN/S N-ACETYLGLUCOSAMINYL PHOSPHATIDYLINOSITOL DEACETYLASE (INTERPROIPR003737) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED (TAIRAT3G581302) HAS 325 BLAST HITS TO 323 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 42 METAZOA - 92 FUNGI - 108 PLANTS - 28 VIRUSES - 0 OTHER EUKARYOTES - 55 (SOURCE NCBI BLINK)
AT2G32850	Predicted Phenotypic Enhancement	FSW = 0.0173	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT2G36260	Predicted Phenotypic Enhancement	FSW = 0.0263	Unknown	IRON-SULFUR CLUSTER ASSEMBLY COMPLEX PROTEIN PUTATIVE
AT2G41340	Predicted interologs mapping	FSW = 0.0087	Unknown	RPB5D (RNA POLYMERASE II FIFTH LARGEST SUBUNIT D) DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT3G05960	Predicted Phenotypic Enhancement	FSW = 0.1199	Unknown	STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G06460	Predicted Phenotypic Enhancement	FSW = 0.0534	Unknown	GNS1/SUR4 MEMBRANE FAMILY PROTEIN
AT3G12690	Predicted interologs mapping	FSW = 0.0336	Unknown	AGC15 (AGC KINASE 15) KINASE
AT3G14390	Predicted Affinity Capture-MS	FSW = 0.0127	Unknown	DIAMINOPIMELATE DECARBOXYLASE PUTATIVE / DAP CARBOXYLASE PUTATIVE
AT3G14740	Predicted Phenotypic Enhancement	FSW = 0.1043	Unknown	PHD FINGER FAMILY PROTEIN
AT3G29060	Predicted Phenotypic Enhancement	FSW = 0.1603	Unknown	LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 6 PLANT STRUCTURES EXPRESSED DURING L MATURE POLLEN STAGE M GERMINATED POLLEN STAGE 4 ANTHESIS PETAL DIFFERENTIATION AND EXPANSION STAGE CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G140401) HAS 970 BLAST HITS TO 889 PROTEINS IN 159 SPECIES ARCHAE - 2 BACTERIA - 5 METAZOA - 379 FUNGI - 260 PLANTS - 176 VIRUSES - 28 OTHER EUKARYOTES - 120 (SOURCE NCBI BLINK)
AT1G08260	Predicted interologs mapping	FSW = 0.0406	Unknown	TIL1 (TILTED 1) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING
AT1G08910	Predicted Phenotypic Enhancement	FSW = 0.0352	Unknown	EMB3001 (EMBRYO DEFECTIVE 3001) ZINC ION BINDING
AT1G18830	Predicted Phenotypic Enhancement	FSW = 0.1711	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G35350	Predicted synthetic growth defect	FSW = 0.0570	Unknown	LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G47830	Predicted synthetic growth defect	FSW = 0.0438	Unknown	CLATHRIN COAT ASSEMBLY PROTEIN PUTATIVE
AT1G55810	Predicted Synthetic Lethality	FSW = 0.0769	Unknown	URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT1G60620	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0111	Unknown	ATRPAC43 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT1G69380	Predicted Phenotypic Enhancement	FSW = 0.0254	Unknown	UNKNOWN PROTEIN
AT2G29190	Predicted Phenotypic Enhancement	FSW = 0.2424	Unknown	APUM2 (ARABIDOPSIS PUMILIO 2) RNA BINDING / BINDING
AT2G36930	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0092	Unknown	ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN
AT2G39840	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0107	Unknown	TOPP4 PROTEIN SERINE/THREONINE PHOSPHATASE
AT3G12490	Predicted interologs mapping	FSW = 0.0434	Unknown	CYSTEINE PROTEASE INHIBITOR PUTATIVE / CYSTATIN PUTATIVE
AT3G13330	Predicted interologs mapping	FSW = 0.0453	Unknown	BINDING
AT3G22290	Predicted synthetic growth defect	FSW = 0.0466	Unknown	UNKNOWN PROTEIN
AT3G59020	Predicted interologs mapping	FSW = 0.0149	Unknown	BINDING / PROTEIN TRANSPORTER
AT3G60245	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0491	Unknown	60S RIBOSOMAL PROTEIN L37A (RPL37AC)
AT3G63120	Predicted Phenotypic Enhancement	FSW = 0.0082	Unknown	CYCP11 (CYCLIN P11) CYCLIN-DEPENDENT PROTEIN KINASE
AT4G03430	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0100	Unknown	EMB2770 (EMBRYO DEFECTIVE 2770) RNA SPLICING FACTOR TRANSESTERIFICATION MECHANISM
AT4G19880	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0509	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RESPONSE TO CADMIUM ION LOCATED IN CHLOROPLAST EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S GLUTATHIONE S-TRANSFERASE PREDICTED (INTERPROIPR016639) GLUTATHIONE S-TRANSFERASE C-TERMINAL (INTERPROIPR004046) GLUTATHIONE S-TRANSFERASE C-TERMINAL-LIKE (INTERPROIPR010987) GLUTATHIONE S-TRANSFERASE/CHLORIDE CHANNEL C-TERMINAL (INTERPROIPR017933) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G450201) HAS 1635 BLAST HITS TO 1635 PROTEINS IN 489 SPECIES ARCHAE - 12 BACTERIA - 905 METAZOA - 23 FUNGI - 158 PLANTS - 57 VIRUSES - 0 OTHER EUKARYOTES - 480 (SOURCE NCBI BLINK)
AT4G21110	Predicted Affinity Capture-MS	FSW = 0.0052	Unknown	G10 FAMILY PROTEIN
AT4G21480	Predicted Phenotypic Enhancement	FSW = 0.0230	Unknown	CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT4G21490	Predicted synthetic growth defect	FSW = 0.0421	Unknown	NDB3 NADH DEHYDROGENASE
AT4G23895	Predicted interologs mapping	FSW = 0.0303	Unknown	PLECKSTRIN HOMOLOGY (PH) DOMAIN-CONTAINING PROTEIN-RELATED
AT4G24040	Predicted Phenotypic Enhancement	FSW = 0.1364	Unknown	TRE1 (TREHALASE 1) ALPHAALPHA-TREHALASE/ TREHALASE
AT4G27130	Predicted synthetic growth defect	FSW = 0.0664	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT5G04420	Predicted Phenotypic Suppression	FSW = 0.0447	Unknown	KELCH REPEAT-CONTAINING PROTEIN
AT5G16170	Predicted synthetic growth defect	FSW = 0.0549	Unknown	UNKNOWN PROTEIN
AT5G16980	Predicted synthetic growth defect	FSW = 0.0383	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G19300	Predicted Phenotypic Enhancement	FSW = 0.1273	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 20 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NUCLEIC ACID-BINDING OB-FOLD-LIKE (INTERPROIPR016027) PROTEIN OF UNKNOWN FUNCTION DUF171 (INTERPROIPR003750) HAS 4766 BLAST HITS TO 2044 PROTEINS IN 217 SPECIES ARCHAE - 72 BACTERIA - 102 METAZOA - 2264 FUNGI - 372 PLANTS - 195 VIRUSES - 4 OTHER EUKARYOTES - 1757 (SOURCE NCBI BLINK)
AT5G20060	Predicted Phenotypic Enhancement	FSW = 0.0053	Unknown	PHOSPHOLIPASE/CARBOXYLESTERASE FAMILY PROTEIN
AT5G38110	Predicted Phenotypic Enhancement	FSW = 0.0772	Unknown	ASF1B (ANTI- SILENCING FUNCTION 1B)
AT5G45620	Predicted Synthetic Lethality	FSW = 0.0412	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT5G52200	Predicted Phenotypic Enhancement	FSW = 0.1903	Unknown	UNKNOWN PROTEIN
AT5G52210	Predicted Phenotypic Enhancement	FSW = 0.0446	Unknown	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) GTP BINDING
AT5G57190	Predicted Phenotypic Enhancement	FSW = 0.2471	Unknown	PSD2 (PHOSPHATIDYLSERINE DECARBOXYLASE 2) PHOSPHATIDYLSERINE DECARBOXYLASE
AT5G66410	Predicted Phenotypic Enhancement	FSW = 0.0424	Unknown	PLP3B (PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG) BETA-TUBULIN BINDING
AT3G52390	Predicted Affinity Capture-MS	FSW = 0.0232	Unknown	TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT4G36070	Predicted Affinity Capture-MS	FSW = 0.0095	Unknown	CPK18 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G14070	Predicted synthetic growth defect	FSW = 0.0424	Unknown	ROXY2 ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE
AT5G61010	Predicted Affinity Capture-MS	FSW = 0.0525	Unknown	ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2) PROTEIN BINDING
AT5G67510	Predicted interologs mapping Synthetic Rescue	FSW = 0.0164	Unknown	60S RIBOSOMAL PROTEIN L26 (RPL26B)
AT5G35700	Predicted interaction prediction	FSW = 0.0127	Unknown	FIM2 (FIMBRIN-LIKE PROTEIN 2) ACTIN BINDING

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT3G47520 - ( MDH (MALATE DEHYDROGENASE) L-malate dehydrogenase/ binding / catalytic/ malate dehydrogenase/ oxidoreductase/ oxidoreductase acting on the CH-OH group of donors NAD or NADP as acceptor )

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown