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AT5G53480 - ( importin beta-2 putative )

137 Proteins interacs with AT5G53480

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT3G05590	Predicted Affinity Capture-MS	FSW = 0.0196	Class C: plastid	RPL18 (RIBOSOMAL PROTEIN L18) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G09630	Predicted Affinity Capture-MS	FSW = 0.0347	Class C: plastid	60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT3G47520	Predicted Synthetic Lethality	FSW = 0.0199	Class C: plastid	MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT1G20620	Predicted two hybrid	FSW = 0.0173	Class C: plastid	CAT3 (CATALASE 3) CATALASE
AT3G07110	Predicted Affinity Capture-MS	FSW = 0.0167	Class C: plastid	60S RIBOSOMAL PROTEIN L13A (RPL13AA)
AT3G44310	Predicted two hybrid Affinity Capture-Western fluorescence acceptor donor pair fluorescence acceptor donor pair	FSW = 0.0057	Class C: plastid	NIT1 INDOLE-3-ACETONITRILE NITRILASE/ INDOLE-3-ACETONITRILE NITRILE HYDRATASE/ NITRILASE
AT5G01410	Predicted interologs mapping	FSW = 0.0250	Class C: plastid	RSR4 (REDUCED SUGAR RESPONSE 4) PROTEIN HETERODIMERIZATION/ PROTEIN HOMODIMERIZATION
AT3G63130	Predicted Synthetic Lethality	FSW = 0.0469	Class C: plastid	RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1) RAN GTPASE ACTIVATOR/ PROTEIN BINDING
AT1G14850	Predicted Synthetic Lethality	FSW = 0.0816	Class C: plastid	NUP155 NUCLEOCYTOPLASMIC TRANSPORTER
AT1G07890	Predicted Synthetic Lethality	FSW = 0.0159	Class C: plastid	APX1 (ASCORBATE PEROXIDASE 1) L-ASCORBATE PEROXIDASE
AT3G03780	Predicted Affinity Capture-MS	FSW = 0.0232	Class C: plastid	ATMS2 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE-HOMOCYSTEINE S-METHYLTRANSFERASE/ METHIONINE SYNTHASE
AT1G16030	Predicted Affinity Capture-Western	FSW = 0.0231	Class C: plastid	HSP70B (HEAT SHOCK PROTEIN 70B) ATP BINDING
AT1G20630	Predicted interaction prediction	FSW = 0.0318	Class C: plastid	CAT1 (CATALASE 1) CATALASE
AT5G54770	Predicted two hybrid interaction prediction	FSW = 0.0146	Class C: plastid	THI1 PROTEIN HOMODIMERIZATION
AT4G08870	Predicted interaction prediction two hybrid	FSW = 0.0398	Class C: plastid	ARGINASE PUTATIVE
AT2G01350	Predicted two hybrid interaction prediction	FSW = 0.0219	Class C: plastid	QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE) NICOTINATE-NUCLEOTIDE DIPHOSPHORYLASE (CARBOXYLATING)
AT1G29900	Predicted Affinity Capture-MS	FSW = 0.0266	Class C: plastid	CARB (CARBAMOYL PHOSPHATE SYNTHETASE B) ATP BINDING / CARBAMOYL-PHOSPHATE SYNTHASE/ CATALYTIC
AT1G19660	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality	FSW = 0.0465	Class C: plastid	WOUND-RESPONSIVE FAMILY PROTEIN
AT1G44318	Predicted two hybrid	FSW = 0.0365	Class C: plastid	HEMB2 CATALYTIC/ METAL ION BINDING / PORPHOBILINOGEN SYNTHASE
AT2G44050	Predicted two hybrid interaction prediction	FSW = 0.0088	Class C: plastid	COS1 (COI1 SUPPRESSOR1) 67-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE
AT1G69740	Predicted interaction prediction	FSW = 0.0259	Class C: plastid	HEMB1 CATALYTIC/ METAL ION BINDING / PORPHOBILINOGEN SYNTHASE
AT5G06290	Predicted Synthetic Rescue Synthetic Rescue	FSW = 0.0175	Class C: plastid	2-CYS PRX B (2-CYSTEINE PEROXIREDOXIN B) ANTIOXIDANT/ PEROXIREDOXIN
AT4G35460	Predicted interaction prediction	FSW = 0.0322	Class C: plastid	NTRB (NADPH-DEPENDENT THIOREDOXIN REDUCTASE B) THIOREDOXIN-DISULFIDE REDUCTASE
AT5G63400	Predicted two hybrid Synthetic Rescue interologs mapping interologs mapping interologs mapping two hybrid two hybrid two hybrid two hybrid two hybrid two hybrid two hybrid Synthetic Rescue two hybrid two hybrid two hybrid Affinity Capture-Western Affinity Capture-Western two hybrid Reconstituted Complex interologs mapping Synthetic Rescue Phenotypic Suppression biochemical	FSW = 0.0250	Unknown	ADK1 (ADENYLATE KINASE 1) ATP BINDING / ADENYLATE KINASE/ NUCLEOBASE NUCLEOSIDE NUCLEOTIDE KINASE/ NUCLEOTIDE KINASE/ PHOSPHOTRANSFERASE PHOSPHATE GROUP AS ACCEPTOR
AT5G17920	Predicted Affinity Capture-MS	FSW = 0.0213	Unknown	ATMS1 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE-HOMOCYSTEINE S-METHYLTRANSFERASE/ COPPER ION BINDING / METHIONINE SYNTHASE
AT3G12580	Predicted Affinity Capture-Western interaction prediction	FSW = 0.0154	Unknown	HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING
AT4G36130	Predicted interologs mapping	FSW = 0.0381	Unknown	60S RIBOSOMAL PROTEIN L8 (RPL8C)
AT5G27850	Predicted Affinity Capture-MS	FSW = 0.0436	Unknown	60S RIBOSOMAL PROTEIN L18 (RPL18C)
AT4G16720	Predicted Affinity Capture-MS	FSW = 0.0167	Unknown	60S RIBOSOMAL PROTEIN L15 (RPL15A)
AT1G55190	Predicted interaction prediction	FSW = 0.0085	Unknown	PRA7
AT5G25780	Predicted Affinity Capture-MS	FSW = 0.0070	Unknown	EIF3B-2 (EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2) NUCLEIC ACID BINDING / PROTEIN BINDING / TRANSLATION INITIATION FACTOR
AT5G24770	Predicted Synthetic Lethality	FSW = 0.0128	Unknown	VSP2 (VEGETATIVE STORAGE PROTEIN 2) ACID PHOSPHATASE
AT5G20020	Predicted in vitro in vitro Enriched domain pair	FSW = 0.0360	Unknown	RAN2 GTP BINDING / GTPASE/ PROTEIN BINDING
AT2G06510	Predicted Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.0018	Unknown	RPA1A (REPLICATION PROTEIN A 1A) DNA BINDING / NUCLEIC ACID BINDING
AT4G11010	Predicted two hybrid	FSW = 0.0237	Unknown	NDPK3 (NUCLEOSIDE DIPHOSPHATE KINASE 3) ATP BINDING / NUCLEOSIDE DIPHOSPHATE KINASE
AT2G45710	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0370	Unknown	40S RIBOSOMAL PROTEIN S27 (RPS27A)
AT1G02500	Predicted Affinity Capture-MS	FSW = 0.0213	Unknown	SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1) METHIONINE ADENOSYLTRANSFERASE
AT3G17390	Predicted Affinity Capture-MS	FSW = 0.0152	Unknown	MTO3 (METHIONINE OVER-ACCUMULATOR 3) METHIONINE ADENOSYLTRANSFERASE
AT5G64740	Predicted Synthetic Lethality	FSW = 0.0091	Unknown	CESA6 (CELLULOSE SYNTHASE 6) CELLULOSE SYNTHASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G43670	Predicted interaction prediction two hybrid	FSW = 0.0205	Unknown	FRUCTOSE-16-BISPHOSPHATASE PUTATIVE / D-FRUCTOSE-16-BISPHOSPHATE 1-PHOSPHOHYDROLASE PUTATIVE / FBPASE PUTATIVE
AT1G55690	Predicted Synthetic Lethality	FSW = 0.0080	Unknown	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT4G26110	Predicted interaction prediction	FSW = 0.0228	Unknown	NAP11 (NUCLEOSOME ASSEMBLY PROTEIN11) DNA BINDING
AT5G47100	Predicted interologs mapping interologs mapping interologs mapping Synthetic Lethality	FSW = 0.0143	Unknown	CBL9 CALCIUM ION BINDING
AT1G13120	Predicted Reconstituted Complex	FSW = 0.0797	Unknown	EMB1745 (EMBRYO DEFECTIVE 1745)
AT3G25540	Predicted two hybrid two hybrid two hybrid interologs mapping	FSW = 0.0155	Unknown	LAG1
AT1G64230	Predicted interologs mapping	FSW = 0.0278	Unknown	UBIQUITIN-CONJUGATING ENZYME PUTATIVE
AT2G19480	Predicted two hybrid	FSW = 0.0146	Unknown	NAP12 (NUCLEOSOME ASSEMBLY PROTEIN 12) DNA BINDING
AT2G17420	Predicted two hybrid	FSW = 0.0141	Unknown	NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A) THIOREDOXIN-DISULFIDE REDUCTASE
AT2G25880	Predicted Affinity Capture-MS	FSW = 0.0155	Unknown	ATAUR2 (ATAURORA2) HISTONE KINASE(H3-S10 SPECIFIC) / KINASE
AT2G31660	Predicted in vitro in vitro	FSW = 0.0179	Unknown	SAD2 (SUPER SENSITIVE TO ABA AND DROUGHT2) BINDING / PROTEIN TRANSPORTER
AT2G45490	Predicted Affinity Capture-MS	FSW = 0.0132	Unknown	ATAUR3 (ATAURORA3) ATP BINDING / HISTONE KINASE(H3-S10 SPECIFIC) / PROTEIN KINASE
AT5G57015	Predicted in vitro	FSW = 0.0070	Unknown	CKL12 (CASEIN KINASE I-LIKE 12) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G27310	Predicted interaction prediction	FSW = 0.0400	Unknown	NTF2A (NUCLEAR TRANSPORT FACTOR 2A) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT4G16830	Predicted interologs mapping	FSW = 0.0089	Unknown	NUCLEAR RNA-BINDING PROTEIN (RGGA)
AT4G34430	Predicted Synthetic Lethality	FSW = 0.0088	Unknown	CHB3 DNA BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT4G24880	Predicted in vivo in vitro	FSW = 0.0232	Unknown	UNKNOWN PROTEIN
AT1G24310	Predicted Affinity Capture-Western Affinity Capture-MS interaction prediction	FSW = 0.0432	Unknown	UNKNOWN PROTEIN
AT5G35910	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0288	Unknown	3-5 EXONUCLEASE DOMAIN-CONTAINING PROTEIN / HELICASE AND RNASE D C-TERMINAL DOMAIN-CONTAINING PROTEIN / HRDC DOMAIN-CONTAINING PROTEIN
AT4G17390	Predicted Affinity Capture-MS	FSW = 0.0149	Unknown	60S RIBOSOMAL PROTEIN L15 (RPL15B)
AT3G05060	Predicted Affinity Capture-MS	FSW = 0.0164	Unknown	SAR DNA-BINDING PROTEIN PUTATIVE
AT5G58590	Predicted in vitro in vitro in vivo	FSW = 0.0225	Unknown	RANBP1 (RAN BINDING PROTEIN 1) PROTEIN BINDING
AT3G06720	Predicted Reconstituted Complex Reconstituted Complex Affinity Capture-MS Reconstituted Complex Reconstituted Complex Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western two hybrid Reconstituted Complex Co-purification interaction prediction Enriched domain pair Co-expression	FSW = 0.2659	Unknown	IMPA-1 (IMPORTIN ALPHA ISOFORM 1) BINDING / PROTEIN TRANSPORTER
AT2G36170	Predicted Affinity Capture-MS	FSW = 0.0070	Unknown	UBIQUITIN EXTENSION PROTEIN 2 (UBQ2) / 60S RIBOSOMAL PROTEIN L40 (RPL40A)
AT2G47620	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0130	Unknown	ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING
AT3G12860	Predicted Affinity Capture-MS	FSW = 0.0122	Unknown	NUCLEOLAR PROTEIN NOP56 PUTATIVE
AT1G56110	Predicted Affinity Capture-MS	FSW = 0.0104	Unknown	NOP56 (ARABIDOPSIS HOMOLOG OF NUCLEOLAR PROTEIN NOP56)
AT4G23570	Predicted Affinity Capture-MS	FSW = 0.0150	Unknown	SGT1A PROTEIN BINDING
AT5G18620	Predicted Affinity Capture-MS	FSW = 0.0172	Unknown	CHR17 (CHROMATIN REMODELING FACTOR17) ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ HELICASE/ HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING / NUCLEOSOME BINDING
AT3G06400	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0196	Unknown	CHR11 (CHROMATIN-REMODELING PROTEIN 11) ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ HELICASE/ HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING / NUCLEOSOME BINDING
AT5G44200	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.0260	Unknown	CBP20 (CAP-BINDING PROTEIN 20) RNA BINDING / RNA CAP BINDING
AT1G05055	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0244	Unknown	GTF2H2 (GENERAL TRANSCRIPTION FACTOR IIH 2) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G65470	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0073	Unknown	FAS1 (FASCIATA 1) HISTONE BINDING
AT2G37470	Predicted Affinity Capture-Western	FSW = 0.0139	Unknown	HISTONE H2B PUTATIVE
AT3G61530	Predicted interaction prediction two hybrid	FSW = 0.0318	Unknown	PANB2 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE
AT4G23900	Predicted two hybrid interaction prediction	FSW = 0.0233	Unknown	NUCLEOSIDE DIPHOSPHATE KINASE 4 (NDK4)
AT2G47510	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0464	Unknown	FUM1 (FUMARASE 1) CATALYTIC/ FUMARATE HYDRATASE
AT2G46110	Predicted two hybrid	FSW = 0.0282	Unknown	KPHMT1 (KETOPANTOATE HYDROXYMETHYLTRANSFERASE 1) 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE
AT3G18480	Predicted Synthetic Lethality	FSW = 0.0057	Unknown	ATCASP (ARABIDOPSIS THALIANA CCAAT-DISPLACEMENT PROTEIN ALTERNATIVELY SPLICED PRODUCT)
AT1G04260	Predicted two hybrid	FSW = 0.0102	Unknown	MPI7 (CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7) PROTEIN BINDING
AT2G14610	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0399	Unknown	PR1 (PATHOGENESIS-RELATED GENE 1)
AT1G52300	Predicted Synthetic Rescue	FSW = 0.0282	Unknown	60S RIBOSOMAL PROTEIN L37 (RPL37B)
AT5G10330	Predicted Synthetic Lethality	FSW = 0.0115	Unknown	HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1) HISTIDINOL-PHOSPHATE TRANSAMINASE
AT2G18230	Predicted Synthetic Lethality	FSW = 0.0199	Unknown	ATPPA2 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 2) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT5G14800	Predicted two hybrid interaction prediction	FSW = 0.0516	Unknown	P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE) PYRROLINE-5-CARBOXYLATE REDUCTASE
AT2G29540	Predicted Synthetic Lethality	FSW = 0.0097	Unknown	ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT2G19560	Predicted two hybrid two hybrid	FSW = 0.0111	Unknown	EER5 (ENHANCED ETHYLENE RESPONSE 5)
AT5G13750	Predicted two hybrid	FSW = 0.0284	Unknown	ZIFL1 (ZINC INDUCED FACILITATOR-LIKE 1) TETRACYCLINEHYDROGEN ANTIPORTER
AT1G09270	Predicted in vitro	FSW = 0.0232	Unknown	IMPA-4 (IMPORTIN ALPHA ISOFORM 4) BINDING / PROTEIN TRANSPORTER
AT1G10390	Predicted in vitro Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Reconstituted Complex	FSW = 0.0689	Unknown	NUCLEOPORIN FAMILY PROTEIN
AT3G15970	Predicted in vitro in vivo	FSW = 0.0483	Unknown	RAN-BINDING PROTEIN 1 DOMAIN-CONTAINING PROTEIN / RANBP1 DOMAIN-CONTAINING PROTEIN
AT3G23090	Predicted in vitro	FSW = 0.0410	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN INFLORESCENCE MERISTEM LEAF APEX HYPOCOTYL FLOWER ROOT EXPRESSED DURING PETAL DIFFERENTIATION AND EXPANSION STAGE CONTAINS INTERPRO DOMAIN/S TARGETING FOR XKLP2 (INTERPROIPR009675) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS WDL1 (TAIRAT3G046303) HAS 483 BLAST HITS TO 450 PROTEINS IN 87 SPECIES ARCHAE - 2 BACTERIA - 15 METAZOA - 188 FUNGI - 17 PLANTS - 148 VIRUSES - 0 OTHER EUKARYOTES - 113 (SOURCE NCBI BLINK)
AT3G59020	Predicted in vitro in vitro	FSW = 0.0375	Unknown	BINDING / PROTEIN TRANSPORTER
AT4G11790	Predicted in vivo in vitro	FSW = 0.0410	Unknown	RAN-BINDING PROTEIN 1 DOMAIN-CONTAINING PROTEIN / RANBP1 DOMAIN-CONTAINING PROTEIN
AT5G49310	Predicted in vitro in vitro	FSW = 0.0331	Unknown	IMPA-5 (IMPORTIN ALPHA ISOFORM 5) BINDING / PROTEIN TRANSPORTER
AT2G45000	Predicted in vitro	FSW = 0.0119	Unknown	EMB2766 (EMBRYO DEFECTIVE 2766) STRUCTURAL CONSTITUENT OF NUCLEAR PORE
AT5G55190	Predicted in vitro in vitro interaction prediction Enriched domain pair Co-expression	FSW = 0.0748	Unknown	RAN3 (RAN GTPASE 3) GTP BINDING / GTPASE/ PROTEIN BINDING
AT1G16360	Predicted Phenotypic Enhancement interologs mapping	FSW = 0.0155	Unknown	LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT1G57660	Predicted two hybrid	FSW = 0.0051	Unknown	60S RIBOSOMAL PROTEIN L21 (RPL21E)
AT1G59660	Predicted interaction prediction Reconstituted Complex Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Reconstituted Complex Affinity Capture-MS	FSW = 0.0845	Unknown	NUCLEOPORIN FAMILY PROTEIN
AT2G27920	Predicted interologs mapping Synthetic Lethality Reconstituted Complex interologs mapping	FSW = 0.0303	Unknown	SCPL51 (SERINE CARBOXYPEPTIDASE-LIKE 51) SERINE-TYPE CARBOXYPEPTIDASE
AT2G32220	Predicted interologs mapping	FSW = 0.0538	Unknown	60S RIBOSOMAL PROTEIN L27 (RPL27A)
AT3G06910	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS	FSW = 0.0422	Unknown	ULP1A (UB-LIKE PROTEASE 1A) SUMO-SPECIFIC PROTEASE/ CYSTEINE-TYPE PEPTIDASE
AT3G08700	Predicted Synthetic Lethality	FSW = 0.0075	Unknown	UBC12 (UBIQUITIN-CONJUGATING ENZYME 12) SMALL CONJUGATING PROTEIN LIGASE/ UBIQUITIN-PROTEIN LIGASE
AT3G24830	Predicted Affinity Capture-MS	FSW = 0.0239	Unknown	60S RIBOSOMAL PROTEIN L13A (RPL13AB)
AT3G51880	Predicted Synthetic Lethality	FSW = 0.0188	Unknown	HMGB1 (HIGH MOBILITY GROUP B 1) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT4G01560	Predicted Reconstituted Complex	FSW = 0.0123	Unknown	MEE49 (MATERNAL EFFECT EMBRYO ARREST 49)
AT4G27640	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0452	Unknown	IMPORTIN BETA-2 SUBUNIT FAMILY PROTEIN
AT4G33200	Predicted interologs mapping	FSW = 0.0137	Unknown	XI-I MOTOR/ PROTEIN BINDING
AT4G35620	Predicted Reconstituted Complex	FSW = 0.0270	Unknown	CYCB22 (CYCLIN B22) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT5G19820	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.0265	Unknown	EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G38890	Predicted Synthetic Lethality	FSW = 0.0273	Unknown	EXORIBONUCLEASE-RELATED
AT5G49970	Predicted Synthetic Lethality	FSW = 0.0087	Unknown	ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE
AT1G10580	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0052	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G15780	Predicted Affinity Capture-MS	FSW = 0.0098	Unknown	UNKNOWN PROTEIN
AT1G21710	Predicted Affinity Capture-MS	FSW = 0.0250	Unknown	OGG1 (8-OXOGUANINE-DNA GLYCOSYLASE 1) OXIDIZED PURINE BASE LESION DNA N-GLYCOSYLASE
AT1G24706	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0150	Unknown	UNKNOWN PROTEIN
AT1G34580	Predicted Reconstituted Complex	FSW = 0.0151	Unknown	MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G54390	Predicted Affinity Capture-MS	FSW = 0.0306	Unknown	PHD FINGER PROTEIN-RELATED
AT1G66510	Predicted Affinity Capture-MS	FSW = 0.0060	Unknown	AAR2 PROTEIN FAMILY
AT2G31260	Predicted biochemical	FSW = 0.0144	Unknown	APG9 (AUTOPHAGY 9)
AT3G54380	Predicted Affinity Capture-MS	FSW = 0.0362	Unknown	SAC3/GANP FAMILY PROTEIN
AT5G12410	Predicted Affinity Capture-MS	FSW = 0.0313	Unknown	THUMP DOMAIN-CONTAINING PROTEIN
AT5G14520	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0243	Unknown	PESCADILLO-RELATED
AT5G40530	Predicted Affinity Capture-MS	FSW = 0.0313	Unknown	EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S METHYLTRANSFERASE-RELATED (INTERPROIPR007823) HAS 293 BLAST HITS TO 293 PROTEINS IN 141 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 93 FUNGI - 88 PLANTS - 22 VIRUSES - 0 OTHER EUKARYOTES - 90 (SOURCE NCBI BLINK)
AT5G65180	Predicted Affinity Capture-MS	FSW = 0.0192	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF618 (INTERPROIPR006903) REGULATION OF NUCLEAR PRE-MRNA PROTEIN (INTERPROIPR006569) ENTH/VHS (INTERPROIPR008942) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G100601) HAS 3523 BLAST HITS TO 3241 PROTEINS IN 333 SPECIES ARCHAE - 25 BACTERIA - 251 METAZOA - 1575 FUNGI - 421 PLANTS - 142 VIRUSES - 17 OTHER EUKARYOTES - 1092 (SOURCE NCBI BLINK)
AT5G67320	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.0061	Unknown	HOS15 (HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 15)
AT1G54440	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0184	Unknown	3-5 EXONUCLEASE/ NUCLEIC ACID BINDING
AT1G02690	Predicted Reconstituted Complex Reconstituted Complex Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Co-purification Reconstituted Complex two hybrid Enriched domain pair Co-expression	FSW = 0.2290	Unknown	IMPA-6 (IMPORTIN ALPHA ISOFORM 6) BINDING / PROTEIN TRANSPORTER
AT4G11260	Predicted Affinity Capture-MS	FSW = 0.0215	Unknown	SGT1B PROTEIN BINDING
AT3G26990	Predicted Affinity Capture-MS	FSW = 0.0122	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF618 (INTERPROIPR006903) REGULATION OF NUCLEAR PRE-MRNA PROTEIN (INTERPROIPR006569) ENTH/VHS (INTERPROIPR008942) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G100601) HAS 815 BLAST HITS TO 806 PROTEINS IN 138 SPECIES ARCHAE - 0 BACTERIA - 10 METAZOA - 490 FUNGI - 159 PLANTS - 81 VIRUSES - 1 OTHER EUKARYOTES - 74 (SOURCE NCBI BLINK)
AT3G06000	Predicted Synthetic Lethality	FSW = 0.0333	Unknown	LEUCINE-RICH REPEAT FAMILY PROTEIN
AT3G43790	Predicted two hybrid	FSW = 0.0365	Unknown	ZIFL2 (ZINC INDUCED FACILITATOR-LIKE 2) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT2G39770	Predicted two hybrid interaction prediction	FSW = 0.0268	Unknown	CYT1 (CYTOKINESIS DEFECTIVE 1) MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE/ NUCLEOTIDYLTRANSFERASE
AT3G16190	Predicted two hybrid interaction prediction	FSW = 0.0501	Unknown	ISOCHORISMATASE HYDROLASE FAMILY PROTEIN
AT3G07270	Predicted interaction prediction two hybrid	FSW = 0.0225	Unknown	GTP CYCLOHYDROLASE I
AT5G55810	Predicted two hybrid interaction prediction	FSW = 0.0266	Unknown	ATNMNAT (A THALIANA NICOTINATE/NICOTINAMIDE MONONUCLEOTIDE ADENYLTRANSFERASE) NICOTINAMIDE-NUCLEOTIDE ADENYLYLTRANSFERASE/ NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE
AT1G60680	Predicted interaction prediction	FSW = 0.0265	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT5G53480 - ( importin beta-2 putative )

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