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AT1G16030 - ( Hsp70b (heat shock protein 70B) ATP binding )

106 Proteins interacs with AT1G16030

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT5G22290	Experimental pull down	FSW = 0.0094	Class B: plastid plasma membrane nucleus cytosol Class D: cytosol (p = 0.67)	ANAC089 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 89) TRANSCRIPTION FACTOR
AT5G02500	Predicted Shared biological function Phylogenetic profile method Co-expression	FSW = 0.0622	Class C: plastid plasma membrane	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) ATP BINDING
AT1G01620	Predicted Phenotypic Enhancement	FSW = 0.0296	Class C: plastid plasma membrane	PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C) WATER CHANNEL
AT3G47520	Predicted Phenotypic Suppression	FSW = 0.0938	Class C: plastid	MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT4G35090	Predicted Phenotypic Enhancement	FSW = 0.0954	Class C: plastid	CAT2 (CATALASE 2) CATALASE
AT5G65430	Predicted Phenotypic Enhancement	FSW = 0.0165	Class C: plastid	GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT5G17990	Predicted Phenotypic Enhancement	FSW = 0.1414	Class C: plastid	TRP1 (TRYPTOPHAN BIOSYNTHESIS 1) ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE
AT3G54670	Predicted Phenotypic Enhancement	FSW = 0.0317	Class C: plastid	TTN8 (TITAN8) ATP BINDING / TRANSPORTER
AT5G53480	Predicted Affinity Capture-Western	FSW = 0.0231	Class C: plastid	IMPORTIN BETA-2 PUTATIVE
AT1G56410	Predicted Shared biological function Phylogenetic profile method Co-expression	FSW = 0.0637	Class C: plastid	ERD2 (EARLY-RESPONSIVE TO DEHYDRATION 2) ATP BINDING
AT1G03475	Predicted Affinity Capture-MS	FSW = 0.0425	Class C: plastid	LIN2 (LESION INITIATION 2) COPROPORPHYRINOGEN OXIDASE
AT1G26160	Predicted Affinity Capture-MS	FSW = 0.0088	Class C: plastid	METAL-DEPENDENT PHOSPHOHYDROLASE HD DOMAIN-CONTAINING PROTEIN
AT3G09440	Predicted Affinity Capture-MS Phylogenetic profile method Co-expression	FSW = 0.0265	Class C: plasma membrane	HEAT SHOCK COGNATE 70 KDA PROTEIN 3 (HSC70-3) (HSP70-3)
AT3G12580	Predicted Phenotypic Enhancement Affinity Capture-Western interologs mapping Phenotypic Enhancement Shared biological function Phylogenetic profile method Co-expression	FSW = 0.1352	Class C: plasma membrane	HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING
AT4G36130	Predicted Phenotypic Enhancement	FSW = 0.0594	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L8 (RPL8C)
AT3G08710	Predicted Phenotypic Enhancement	FSW = 0.0304	Class C: plasma membrane	ATH9 (THIOREDOXIN H-TYPE 9)
AT3G22630	Predicted Affinity Capture-MS	FSW = 0.0066	Class C: plasma membrane	PBD1 (20S PROTEASOME BETA SUBUNIT D1) PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT3G44110	Predicted Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western biochemical co-fractionation Co-fractionation Phenotypic Enhancement Synthetic Lethality	FSW = 0.0518	Class C: plasma membrane	ATJ3 PROTEIN BINDING
AT5G20010	Predicted Affinity Capture-MS	FSW = 0.0135	Class C: plasma membrane	RAN-1 GTP BINDING / GTPASE/ PROTEIN BINDING
AT5G22060	Predicted Synthetic Lethality Co-crystal Structure	FSW = 0.0650	Class C: plasma membrane	ATJ2 PROTEIN BINDING
AT3G61650	Predicted Synthetic Lethality	FSW = 0.0419	Class C: plasma membrane	TUBG1 (GAMMA-TUBULIN) GTP BINDING / GTPASE/ STRUCTURAL MOLECULE
AT5G52640	Predicted Affinity Capture-Western synthetic growth defect	FSW = 0.0294	Class C: plasma membrane	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT5G47510	Predicted Synthetic Lethality	FSW = 0.0229	Class C: plasma membrane	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT4G08800	Predicted Synthetic Lethality	FSW = 0.0222	Class C: plasma membrane	PROTEIN KINASE PUTATIVE
AT1G62740	Predicted two hybrid	FSW = 0.0430	Class C: plasma membrane	STRESS-INDUCIBLE PROTEIN PUTATIVE
AT1G80050	Predicted Synthetic Lethality	FSW = 0.0110	Class C: plasma membrane	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) ADENINE PHOSPHORIBOSYLTRANSFERASE/ PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT5G02490	Predicted Phylogenetic profile method Co-expression	FSW = 0.0329	Class C: plasma membrane	HEAT SHOCK COGNATE 70 KDA PROTEIN 2 (HSC70-2) (HSP70-2)
AT3G19930	Predicted Phenotypic Enhancement	FSW = 0.1190	Class C: plasma membrane	STP4 (SUGAR TRANSPORTER 4) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUCROSEHYDROGEN SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT1G64230	Predicted Affinity Capture-MS	FSW = 0.0277	Class C: plasma membrane	UBIQUITIN-CONJUGATING ENZYME PUTATIVE
AT1G02920	Predicted Affinity Capture-MS	FSW = 0.0105	Unknown	GSTF7 COPPER ION BINDING / GLUTATHIONE BINDING / GLUTATHIONE TRANSFERASE
AT4G09720	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0283	Unknown	RAS-RELATED GTP-BINDING PROTEIN PUTATIVE
AT1G18070	Predicted Affinity Capture-Western Reconstituted Complex	FSW = 0.0508	Unknown	EF-1-ALPHA-RELATED GTP-BINDING PROTEIN PUTATIVE
AT3G62870	Predicted synthetic growth defect	FSW = 0.0362	Unknown	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT5G65940	Predicted Phenotypic Enhancement	FSW = 0.0573	Unknown	CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1) 3-HYDROXYISOBUTYRYL-COA HYDROLASE
AT3G06720	Predicted interologs mapping	FSW = 0.0205	Unknown	IMPA-1 (IMPORTIN ALPHA ISOFORM 1) BINDING / PROTEIN TRANSPORTER
AT2G47620	Predicted Affinity Capture-MS	FSW = 0.0264	Unknown	ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING
AT1G04510	Predicted Co-purification	FSW = 0.0033	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT5G60980	Predicted Affinity Capture-MS	FSW = 0.0146	Unknown	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT2G34450	Predicted Phenotypic Enhancement	FSW = 0.1220	Unknown	HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN
AT4G39160	Predicted Phenotypic Enhancement	FSW = 0.0271	Unknown	DNA BINDING / TRANSCRIPTION FACTOR
AT4G18880	Predicted Synthetic Rescue Synthetic Rescue	FSW = 0.0277	Unknown	AT-HSFA4A DNA BINDING / TRANSCRIPTION FACTOR
AT1G53530	Predicted Synthetic Lethality	FSW = 0.0319	Unknown	SIGNAL PEPTIDASE I FAMILY PROTEIN
AT3G24350	Predicted Affinity Capture-Western	FSW = 0.0029	Unknown	SYP32 (SYNTAXIN OF PLANTS 32) SNAP RECEPTOR
AT2G38230	Predicted Phenotypic Enhancement	FSW = 0.0332	Unknown	ATPDX11 (PYRIDOXINE BIOSYNTHESIS 11) PROTEIN HETERODIMERIZATION
AT4G33150	Predicted Affinity Capture-MS	FSW = 0.0490	Unknown	LYSINE-KETOGLUTARATE REDUCTASE/SACCHAROPINE DEHYDROGENASE BIFUNCTIONAL ENZYME
AT2G31970	Predicted Affinity Capture-MS	FSW = 0.0086	Unknown	RAD50 ATP BINDING / NUCLEASE/ ZINC ION BINDING
AT4G02570	Predicted Phenotypic Enhancement	FSW = 0.0223	Unknown	ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) PROTEIN BINDING
AT5G59720	Predicted Affinity Capture-Western	FSW = 0.0824	Unknown	HSP182 (HEAT SHOCK PROTEIN 182)
AT5G38470	Predicted Affinity Capture-MS	FSW = 0.0034	Unknown	DNA REPAIR PROTEIN RAD23 PUTATIVE
AT5G47880	Predicted Phenotypic Enhancement	FSW = 0.0106	Unknown	ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT5G63960	Predicted Synthetic Lethality	FSW = 0.0802	Unknown	EMB2780 (EMBRYO DEFECTIVE 2780) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT4G26840	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0184	Unknown	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG
AT4G21710	Predicted Affinity Capture-MS	FSW = 0.0068	Unknown	NRPB2 DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT1G03530	Predicted Affinity Capture-MS	FSW = 0.0143	Unknown	NAF1 (NUCLEAR ASSEMBLY FACTOR 1)
AT1G18830	Predicted Phenotypic Suppression	FSW = 0.1286	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G31660	Predicted Affinity Capture-MS	FSW = 0.0061	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S BYSTIN (INTERPROIPR007955) HAS 370 BLAST HITS TO 362 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 7 METAZOA - 139 FUNGI - 93 PLANTS - 32 VIRUSES - 0 OTHER EUKARYOTES - 99 (SOURCE NCBI BLINK)
AT1G34340	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1829	Unknown	ESTERASE/LIPASE/THIOESTERASE FAMILY PROTEIN
AT1G49490	Predicted Affinity Capture-Western	FSW = 0.0059	Unknown	LEUCINE-RICH REPEAT FAMILY PROTEIN / EXTENSIN FAMILY PROTEIN
AT1G55810	Predicted Synthetic Lethality	FSW = 0.0790	Unknown	URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT1G61670	Predicted Phenotypic Suppression	FSW = 0.1085	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM INTEGRAL TO MEMBRANE CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G109801) HAS 473 BLAST HITS TO 471 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 242 FUNGI - 99 PLANTS - 92 VIRUSES - 0 OTHER EUKARYOTES - 38 (SOURCE NCBI BLINK)
AT1G71530	Predicted Phenotypic Enhancement	FSW = 0.0622	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT2G01830	Predicted Phenotypic Enhancement	FSW = 0.0200	Unknown	WOL (WOODEN LEG) CYTOKININ RECEPTOR/ OSMOSENSOR/ PHOSPHOPROTEIN PHOSPHATASE/ PROTEIN HISTIDINE KINASE
AT2G15820	Predicted biochemical	FSW = 0.0092	Unknown	OTP51 (ORGANELLE TRANSCRIPT PROCESSING 51) RNA SPLICING FACTOR TRANSESTERIFICATION MECHANISM
AT2G48100	Predicted Synthetic Lethality	FSW = 0.0072	Unknown	EXONUCLEASE FAMILY PROTEIN
AT3G04680	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0222	Unknown	CLPS3 (CLP-SIMILAR PROTEIN 3) BINDING
AT3G09100	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0106	Unknown	MRNA CAPPING ENZYME FAMILY PROTEIN
AT3G18030	Predicted Affinity Capture-MS	FSW = 0.0201	Unknown	ATHAL3A FMN BINDING / PHOSPHOPANTOTHENOYLCYSTEINE DECARBOXYLASE
AT4G16360	Predicted Phenotypic Enhancement	FSW = 0.0318	Unknown	AMP-ACTIVATED PROTEIN KINASE
AT4G24040	Predicted Phenotypic Enhancement	FSW = 0.0589	Unknown	TRE1 (TREHALASE 1) ALPHAALPHA-TREHALASE/ TREHALASE
AT4G25150	Predicted Affinity Capture-MS	FSW = 0.0049	Unknown	ACID PHOSPHATASE PUTATIVE
AT4G28200	Predicted Affinity Capture-MS	FSW = 0.0107	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RNA PROCESSING LOCATED IN INTRACELLULAR EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S RNA-PROCESSING PROTEIN HAT HELIX (INTERPROIPR003107) U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 6 (INTERPROIPR013949) HAS 352 BLAST HITS TO 342 PROTEINS IN 144 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 111 FUNGI - 130 PLANTS - 24 VIRUSES - 0 OTHER EUKARYOTES - 87 (SOURCE NCBI BLINK)
AT4G30540	Predicted Synthetic Lethality	FSW = 0.0117	Unknown	GLUTAMINE AMIDOTRANSFERASE CLASS-I DOMAIN-CONTAINING PROTEIN
AT4G36630	Predicted two hybrid Affinity Capture-Western synthetic growth defect Phenotypic Enhancement	FSW = 0.0123	Unknown	EMB2754 (EMBRYO DEFECTIVE 2754) BINDING / SMALL GTPASE REGULATOR
AT5G52200	Predicted Phenotypic Enhancement	FSW = 0.1067	Unknown	UNKNOWN PROTEIN
AT5G53120	Predicted Phenotypic Enhancement	FSW = 0.1250	Unknown	SPDS3 (SPERMIDINE SYNTHASE 3) SPERMIDINE SYNTHASE/ SPERMINE SYNTHASE
AT5G55090	Predicted Affinity Capture-Western	FSW = 0.0117	Unknown	MAPKKK15 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G65690	Predicted Phenotypic Enhancement	FSW = 0.1308	Unknown	PCK2 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 2) ATP BINDING / PHOSPHOENOLPYRUVATE CARBOXYKINASE (ATP)/ PHOSPHOENOLPYRUVATE CARBOXYKINASE/ PURINE NUCLEOTIDE BINDING
AT1G49520	Predicted Phenotypic Enhancement	FSW = 0.1443	Unknown	SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN
AT1G62850	Predicted Phenotypic Enhancement	FSW = 0.0164	Unknown	TRANSLATION RELEASE FACTOR
AT2G17560	Predicted Phenotypic Enhancement	FSW = 0.0327	Unknown	HMGB4 (HIGH MOBILITY GROUP B 4) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT2G21890	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.0877	Unknown	CAD3 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 3) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT2G23070	Predicted Phenotypic Enhancement	FSW = 0.0671	Unknown	CASEIN KINASE II ALPHA CHAIN PUTATIVE
AT4G33200	Predicted Phenotypic Enhancement	FSW = 0.0602	Unknown	XI-I MOTOR/ PROTEIN BINDING
AT4G33950	Predicted Phenotypic Enhancement	FSW = 0.1346	Unknown	OST1 (OPEN STOMATA 1) CALCIUM-DEPENDENT PROTEIN SERINE/THREONINE KINASE/ KINASE/ PROTEIN KINASE
AT5G48640	Predicted Affinity Capture-Western	FSW = 0.0199	Unknown	CYCLIN FAMILY PROTEIN
AT5G57480	Predicted Synthetic Lethality	FSW = 0.0164	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT5G63610	Predicted Affinity Capture-Western	FSW = 0.0189	Unknown	CDKE1 (CYCLIN-DEPENDENT KINASE E1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G67100	Predicted interologs mapping interologs mapping	FSW = 0.0257	Unknown	ICU2 (INCURVATA2) DNA-DIRECTED DNA POLYMERASE
AT1G11660	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western co-fractionation Co-fractionation Reconstituted Complex	FSW = 0.0464	Unknown	HEAT SHOCK PROTEIN PUTATIVE
AT5G02530	Predicted Affinity Capture-MS	FSW = 0.0050	Unknown	RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE
AT5G10270	Predicted Affinity Capture-MS	FSW = 0.0265	Unknown	CDKC1 (CYCLIN-DEPENDENT KINASE C1) KINASE
AT1G29940	Predicted Affinity Capture-MS	FSW = 0.0092	Unknown	NRPA2 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ RIBONUCLEOSIDE BINDING
AT3G01090	Predicted Affinity Capture-MS	FSW = 0.0381	Unknown	AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) PROTEIN BINDING / PROTEIN KINASE
AT3G09350	Predicted Affinity Capture-Western Phenotypic Enhancement	FSW = 0.0204	Unknown	ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN
AT1G22760	Predicted Affinity Capture-Western Reconstituted Complex	FSW = 0.0185	Unknown	PAB3 (POLY(A) BINDING PROTEIN 3) RNA BINDING / TRANSLATION INITIATION FACTOR
AT1G10350	Predicted Reconstituted Complex Affinity Capture-Western Protein-peptide Reconstituted Complex	FSW = 0.0232	Unknown	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT1G12270	Predicted Phenotypic Enhancement Affinity Capture-Western Reconstituted Complex two hybrid	FSW = 0.0571	Unknown	STRESS-INDUCIBLE PROTEIN PUTATIVE
AT5G48630	Predicted Affinity Capture-Western	FSW = 0.0250	Unknown	CYCLIN FAMILY PROTEIN
AT4G09140	Predicted Co-purification	FSW = 0.0190	Unknown	MLH1 (MUTL-HOMOLOGUE 1) PROTEIN BINDING BRIDGING
AT1G02690	Predicted interologs mapping	FSW = 0.0222	Unknown	IMPA-6 (IMPORTIN ALPHA ISOFORM 6) BINDING / PROTEIN TRANSPORTER
AT1G74310	Predicted interologs mapping Phenotypic Enhancement Shared biological function Co-expression	FSW = 0.0743	Unknown	ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT4G30890	Predicted interologs mapping	FSW = 0.0240	Unknown	UBP24 (UBIQUITIN-SPECIFIC PROTEASE 24) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE
AT1G04130	Predicted Reconstituted Complex	FSW = 0.0490	Unknown	TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN
AT1G29990	Predicted Synthetic Lethality	FSW = 0.0055	Unknown	PDF6 (PREFOLDIN 6) UNFOLDED PROTEIN BINDING
AT3G25970	Predicted Gene fusion method	FSW = 0.0298	Unknown	PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN
AT2G42290	Predicted Gene fusion method	FSW = 0.0298	Unknown	LEUCINE-RICH REPEAT FAMILY PROTEIN

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Proteins

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT1G16030 - ( Hsp70b (heat shock protein 70B) ATP binding )

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