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AT3G08710 - ( ATH9 (thioredoxin H-type 9) )

123 Proteins interacs with AT3G08710

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT5G15090	Predicted Synthetic Lethality	FSW = 0.0432	Class C: vacuole plasma membrane	VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3) VOLTAGE-GATED ANION CHANNEL
AT4G27090	Predicted Phenotypic Enhancement	FSW = 0.1012	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L14 (RPL14B)
AT2G20450	Predicted Affinity Capture-MS	FSW = 0.1590	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT4G36130	Predicted Phenotypic Enhancement	FSW = 0.0180	Class C: vacuole plasma membrane	60S RIBOSOMAL PROTEIN L8 (RPL8C)
AT1G22780	Predicted Affinity Capture-MS	FSW = 0.1599	Class C: vacuole plasma membrane	PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G36750	Predicted two hybrid	FSW = 0.0608	Class C: vacuole plasma membrane	QUINONE REDUCTASE FAMILY PROTEIN
AT5G63400	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0374	Class C: vacuole	ADK1 (ADENYLATE KINASE 1) ATP BINDING / ADENYLATE KINASE/ NUCLEOBASE NUCLEOSIDE NUCLEOTIDE KINASE/ NUCLEOTIDE KINASE/ PHOSPHOTRANSFERASE PHOSPHATE GROUP AS ACCEPTOR
AT3G47520	Predicted Phenotypic Enhancement	FSW = 0.0896	Class C: vacuole	MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT1G07930	Predicted Affinity Capture-MS	FSW = 0.1810	Class C: vacuole	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT3G26590	Predicted biochemical	FSW = 0.0213	Class C: vacuole	MATE EFFLUX FAMILY PROTEIN
AT5G61520	Predicted two hybrid	FSW = 0.0278	Class C: plasma membrane	HEXOSE TRANSPORTER PUTATIVE
AT1G16030	Predicted Phenotypic Enhancement	FSW = 0.0304	Class C: plasma membrane	HSP70B (HEAT SHOCK PROTEIN 70B) ATP BINDING
AT5G45420	Predicted Affinity Capture-MS	FSW = 0.1622	Class C: plasma membrane	MYB FAMILY TRANSCRIPTION FACTOR
AT3G47370	Predicted Affinity Capture-MS	FSW = 0.0762	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S20 (RPS20B)
AT5G62880	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0703	Class C: plasma membrane	ARAC10 GTP BINDING
AT3G05560	Predicted two hybrid	FSW = 0.0165	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L22-2 (RPL22B)
AT4G28950	Predicted Affinity Capture-MS	FSW = 0.1490	Class C: plasma membrane	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) GTP BINDING
AT3G13560	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1217	Class C: plasma membrane	GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT1G79530	Predicted Affinity Capture-MS	FSW = 0.0040	Class C: plasma membrane	GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1) NAD OR NADH BINDING / BINDING / CATALYTIC/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (PHOSPHORYLATING)/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
AT4G39180	Predicted two hybrid	FSW = 0.0294	Class C: plasma membrane	SEC14 PHOSPHATIDYLINOSITOL TRANSPORTER
AT4G04720	Predicted Affinity Capture-MS	FSW = 0.0311	Class C: plasma membrane	CPK21 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G36860	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1540	Class C: plasma membrane	ZINC ION BINDING
AT5G26340	Predicted two hybrid Phenotypic Enhancement	FSW = 0.0590	Class C: plasma membrane	MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT1G69850	Predicted Phenotypic Enhancement	FSW = 0.0765	Class C: plasma membrane	ATNRT12 (ARABIDOPSIS THALIANA NITRATE TRANSPORTER 12) CALCIUM ION BINDING / TRANSPORTER
AT3G20920	Predicted Phenotypic Enhancement	FSW = 0.0776	Class C: plasma membrane	TRANSLOCATION PROTEIN-RELATED
AT4G24400	Predicted Affinity Capture-MS	FSW = 0.1988	Class C: plasma membrane	CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE
AT1G09640	Predicted Affinity Capture-MS	FSW = 0.1012	Class C: plasma membrane	ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE
AT1G80050	Predicted Synthetic Lethality	FSW = 0.0401	Class C: plasma membrane	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) ADENINE PHOSPHORIBOSYLTRANSFERASE/ PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT5G12350	Predicted Affinity Capture-MS Affinity Capture-Western	FSW = 0.0552	Class C: plasma membrane	RAN GTPASE BINDING / CHROMATIN BINDING / ZINC ION BINDING
AT2G19860	Predicted Affinity Capture-MS	FSW = 0.1692	Unknown	HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G08950	Predicted Affinity Capture-MS	FSW = 0.1794	Unknown	ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT3G07100	Predicted two hybrid	FSW = 0.0398	Unknown	PROTEIN TRANSPORT PROTEIN SEC24 PUTATIVE
AT3G19980	Predicted Affinity Capture-MS	FSW = 0.1134	Unknown	ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT3G16950	Predicted Affinity Capture-MS	FSW = 0.2174	Unknown	LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT1G55920	Predicted Phenotypic Enhancement	FSW = 0.1287	Unknown	ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE
AT3G48870	Predicted Affinity Capture-MS	FSW = 0.0105	Unknown	HSP93-III ATP BINDING / ATPASE/ DNA BINDING / NUCLEASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT3G11630	Predicted Affinity Capture-MS	FSW = 0.1861	Unknown	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT5G51820	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.0389	Unknown	PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT3G44610	Predicted Affinity Capture-MS	FSW = 0.1188	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT1G80030	Predicted Affinity Capture-MS	FSW = 0.0783	Unknown	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT4G30950	Predicted Affinity Capture-MS	FSW = 0.0468	Unknown	FAD6 (FATTY ACID DESATURASE 6) OMEGA-6 FATTY ACID DESATURASE
AT1G70580	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0830	Unknown	AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2) L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE/ GLYCINE2-OXOGLUTARATE AMINOTRANSFERASE
AT5G59950	Predicted Affinity Capture-MS	FSW = 0.0329	Unknown	RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE
AT2G35690	Predicted Affinity Capture-MS	FSW = 0.1170	Unknown	ACX5 (ACYL-COA OXIDASE 5) FAD BINDING / ACYL-COA DEHYDROGENASE/ ACYL-COA OXIDASE/ ELECTRON CARRIER/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-CH GROUP OF DONORS
AT1G06960	Predicted Synthetic Lethality	FSW = 0.0176	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN U2B PUTATIVE / SPLICEOSOMAL PROTEIN PUTATIVE
AT1G02680	Predicted Affinity Capture-MS	FSW = 0.0316	Unknown	TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT5G44500	Predicted Affinity Capture-MS	FSW = 0.1580	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT4G26600	Predicted Affinity Capture-MS	FSW = 0.0296	Unknown	NUCLEOLAR PROTEIN PUTATIVE
AT3G13445	Predicted Phenotypic Enhancement	FSW = 0.0764	Unknown	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT1G53165	Predicted Phenotypic Enhancement	FSW = 0.0711	Unknown	ATMAP4K ALPHA1 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G39160	Predicted Phenotypic Enhancement	FSW = 0.1033	Unknown	DNA BINDING / TRANSCRIPTION FACTOR
AT3G20970	Predicted Synthetic Rescue	FSW = 0.0321	Unknown	NFU4 STRUCTURAL MOLECULE
AT2G20510	Predicted Synthetic Lethality	FSW = 0.0435	Unknown	ATTIM44-1 PROTEIN-TRANSMEMBRANE TRANSPORTING ATPASE
AT1G70190	Predicted two hybrid	FSW = 0.0716	Unknown	RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G47510	Predicted Affinity Capture-MS	FSW = 0.0079	Unknown	FUM1 (FUMARASE 1) CATALYTIC/ FUMARATE HYDRATASE
AT4G30990	Predicted Affinity Capture-MS	FSW = 0.1771	Unknown	BINDING
AT4G33730	Predicted Phenotypic Enhancement	FSW = 0.0953	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT1G50050	Predicted Affinity Capture-MS	FSW = 0.0141	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT4G33720	Predicted Affinity Capture-MS	FSW = 0.0209	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT5G08335	Predicted Affinity Capture-MS	FSW = 0.0312	Unknown	ATSTE14B PROTEIN-S-ISOPRENYLCYSTEINE O-METHYLTRANSFERASE
AT2G27550	Predicted Affinity Capture-MS	FSW = 0.0109	Unknown	ATC (ARABIDOPSIS THALIANA CENTRORADIALIS) PHOSPHATIDYLETHANOLAMINE BINDING
AT5G28060	Predicted Phenotypic Enhancement	FSW = 0.0851	Unknown	40S RIBOSOMAL PROTEIN S24 (RPS24B)
AT4G15900	Predicted Phenotypic Enhancement two hybrid	FSW = 0.0408	Unknown	PRL1 (PLEIOTROPIC REGULATORY LOCUS 1) BASAL TRANSCRIPTION REPRESSOR/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT4G29430	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0963	Unknown	RPS15AE (RIBOSOMAL PROTEIN S15A E) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G10610	Predicted Affinity Capture-MS	FSW = 0.0129	Unknown	40S RIBOSOMAL PROTEIN S17 (RPS17C)
AT4G17190	Predicted Affinity Capture-MS	FSW = 0.0636	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G19730	Predicted Phylogenetic profile method Co-expression	FSW = 0.0074	Unknown	ATTRX4 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR
AT2G41460	Predicted in vitro in vitro	FSW = 0.0060	Unknown	ARP DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE
AT4G10920	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0654	Unknown	KELP DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION REGULATOR
AT1G15830	Predicted in vitro two hybrid	FSW = 0.0181	Unknown	UNKNOWN PROTEIN
AT1G05910	Predicted Affinity Capture-MS	FSW = 0.0790	Unknown	CELL DIVISION CYCLE PROTEIN 48-RELATED / CDC48-RELATED
AT1G15440	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0437	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G52500	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.0519	Unknown	ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G55255	Predicted Phenotypic Enhancement	FSW = 0.0074	Unknown	ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G57620	Predicted Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.0191	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G79210	Predicted Affinity Capture-MS	FSW = 0.0525	Unknown	20S PROTEASOME ALPHA SUBUNIT B PUTATIVE
AT2G44820	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0152	Unknown	UNKNOWN PROTEIN
AT3G06460	Predicted Phenotypic Enhancement	FSW = 0.0226	Unknown	GNS1/SUR4 MEMBRANE FAMILY PROTEIN
AT1G05785	Predicted Affinity Capture-MS	FSW = 0.0897	Unknown	GOT1-LIKE FAMILY PROTEIN
AT1G10210	Predicted Affinity Capture-MS	FSW = 0.0202	Unknown	ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE
AT1G11510	Predicted synthetic growth defect	FSW = 0.0142	Unknown	DNA-BINDING STOREKEEPER PROTEIN-RELATED
AT1G14310	Predicted Affinity Capture-MS	FSW = 0.1291	Unknown	HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN
AT1G18830	Predicted Phenotypic Enhancement	FSW = 0.0778	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G20920	Predicted Affinity Capture-MS	FSW = 0.2263	Unknown	DEAD BOX RNA HELICASE PUTATIVE
AT1G33090	Predicted Affinity Capture-MS	FSW = 0.0161	Unknown	MATE EFFLUX FAMILY PROTEIN
AT1G34340	Predicted Phenotypic Suppression	FSW = 0.0466	Unknown	ESTERASE/LIPASE/THIOESTERASE FAMILY PROTEIN
AT1G34460	Predicted interologs mapping interologs mapping Synthetic Lethality	FSW = 0.1045	Unknown	CYCB15 (CYCLIN B15) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G51770	Predicted Affinity Capture-MS	FSW = 0.1865	Unknown	UNKNOWN PROTEIN
AT1G55730	Predicted Affinity Capture-MS	FSW = 0.2094	Unknown	ATCAX5 CALCIUMCATION ANTIPORTER/ CATIONCATION ANTIPORTER
AT1G55810	Predicted Phenotypic Enhancement	FSW = 0.0199	Unknown	URACIL PHOSPHORIBOSYLTRANSFERASE PUTATIVE / UMP PYROPHOSPHORYLASE PUTATIVE / UPRTASE PUTATIVE
AT1G58520	Predicted Affinity Capture-MS	FSW = 0.0100	Unknown	HYDROLASE ACTING ON ESTER BONDS / LIPASE
AT1G62880	Predicted Affinity Capture-MS	FSW = 0.2020	Unknown	CORNICHON FAMILY PROTEIN
AT1G64480	Predicted Affinity Capture-MS	FSW = 0.1812	Unknown	CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING
AT1G66240	Predicted Affinity Capture-MS	FSW = 0.0318	Unknown	ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1) METAL ION BINDING
AT1G66950	Predicted two hybrid	FSW = 0.0278	Unknown	PDR11 (PLEIOTROPIC DRUG RESISTANCE 11) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT1G68310	Predicted Affinity Capture-MS	FSW = 0.0152	Unknown	VACUOLAR SORTING SIGNAL BINDING
AT1G71530	Predicted two hybrid Phenotypic Enhancement	FSW = 0.0543	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT2G03667	Predicted Affinity Capture-MS	FSW = 0.1277	Unknown	ASPARAGINE SYNTHASE (GLUTAMINE-HYDROLYZING)
AT2G17620	Predicted Affinity Capture-MS	FSW = 0.1247	Unknown	CYCB21 (CYCLIN B21) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G20410	Predicted Synthetic Rescue	FSW = 0.0109	Unknown	ACTIVATING SIGNAL COINTEGRATOR-RELATED
AT2G21250	Predicted Affinity Capture-MS	FSW = 0.1719	Unknown	MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE
AT2G29190	Predicted Phenotypic Enhancement	FSW = 0.1016	Unknown	APUM2 (ARABIDOPSIS PUMILIO 2) RNA BINDING / BINDING
AT2G46650	Predicted two hybrid	FSW = 0.1159	Unknown	CB5-C (CYTOCHROME B5 ISOFORM C) HEME BINDING
AT2G47760	Predicted Affinity Capture-MS	FSW = 0.0799	Unknown	ALG3 ALPHA-13-MANNOSYLTRANSFERASE/ CATALYTIC
AT2G48100	Predicted Synthetic Lethality	FSW = 0.0427	Unknown	EXONUCLEASE FAMILY PROTEIN
AT3G02510	Predicted Affinity Capture-Western	FSW = 0.0113	Unknown	REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT3G19670	Predicted Phenotypic Enhancement	FSW = 0.0064	Unknown	PROTEIN BINDING
AT3G19940	Predicted Affinity Capture-MS	FSW = 0.1621	Unknown	SUGAR TRANSPORTER PUTATIVE
AT3G52390	Predicted Affinity Capture-MS	FSW = 0.2300	Unknown	TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT3G53880	Predicted Co-purification	FSW = 0.0573	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT3G57140	Predicted biochemical	FSW = 0.0784	Unknown	PATATIN-RELATED
AT3G59540	Predicted Synthetic Lethality	FSW = 0.0364	Unknown	60S RIBOSOMAL PROTEIN L38 (RPL38B)
AT3G59790	Predicted Affinity Capture-MS	FSW = 0.0393	Unknown	ATMPK10 MAP KINASE/ KINASE
AT3G61210	Predicted two hybrid	FSW = 0.0554	Unknown	EMBRYO-ABUNDANT PROTEIN-RELATED
AT4G00980	Predicted Affinity Capture-MS	FSW = 0.0077	Unknown	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN
AT4G14240	Predicted biochemical	FSW = 0.0091	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF21 (INTERPROIPR002550) CYSTATHIONINE BETA-SYNTHASE CORE (INTERPROIPR000644) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS CBS DOMAIN-CONTAINING PROTEIN-RELATED (TAIRAT4G142301) HAS 6770 BLAST HITS TO 6657 PROTEINS IN 1347 SPECIES ARCHAE - 62 BACTERIA - 4461 METAZOA - 254 FUNGI - 179 PLANTS - 121 VIRUSES - 0 OTHER EUKARYOTES - 1693 (SOURCE NCBI BLINK)
AT4G30820	Predicted two hybrid	FSW = 0.0453	Unknown	CYCLIN-DEPENDENT KINASE-ACTIVATING KINASE ASSEMBLY FACTOR-RELATED / CDK-ACTIVATING KINASE ASSEMBLY FACTOR-RELATED
AT5G06620	Predicted Affinity Capture-MS	FSW = 0.0323	Unknown	SDG38 (SET DOMAIN PROTEIN 38)
AT5G24410	Predicted Affinity Capture-MS	FSW = 0.0325	Unknown	GLUCOSAMINE/GALACTOSAMINE-6-PHOSPHATE ISOMERASE-RELATED
AT5G41190	Predicted Affinity Capture-MS	FSW = 0.1751	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G56510	Predicted Affinity Capture-MS	FSW = 0.0443	Unknown	APUM12 (ARABIDOPSIS PUMILIO 12) RNA BINDING / BINDING
AT5G57190	Predicted Phenotypic Enhancement	FSW = 0.1014	Unknown	PSD2 (PHOSPHATIDYLSERINE DECARBOXYLASE 2) PHOSPHATIDYLSERINE DECARBOXYLASE
AT4G25860	Predicted Affinity Capture-MS	FSW = 0.1086	Unknown	ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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AT3G08710 - ( ATH9 (thioredoxin H-type 9) )

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