AtPIN will be upgraded. Please send your suggestions here

AT3G16950 - ( LPD1 (LIPOAMIDE DEHYDROGENASE 1) dihydrolipoyl dehydrogenase )

125 Proteins interacs with AT3G16950

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT3G03920	Predicted Affinity Capture-MS	FSW = 0.0227	Class C: plastid nucleus	GAR1 RNA-BINDING REGION FAMILY PROTEIN
AT3G17240	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.0694	Class C: plastid	MTLPD2 (LIPOAMIDE DEHYDROGENASE 2) ATP BINDING / DIHYDROLIPOYL DEHYDROGENASE
AT1G15210	Predicted Affinity Capture-MS	FSW = 0.5922	Class C: plastid	PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT5G24400	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2498	Class C: plastid	EMB2024 (EMBRYO DEFECTIVE 2024) 6-PHOSPHOGLUCONOLACTONASE/ CATALYTIC
AT2G22780	Predicted Affinity Capture-MS	FSW = 0.0447	Class C: plastid	PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT2G39290	Predicted Affinity Capture-MS	FSW = 0.0486	Class C: plastid	PGP1 (PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 1) CDP-ALCOHOL PHOSPHATIDYLTRANSFERASE/ CDP-DIACYLGLYCEROL-GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE
AT1G48030	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.0305	Class C: plastid	MTLPD1 (MITOCHONDRIAL LIPOAMIDE DEHYDROGENASE 1) ATP BINDING / DIHYDROLIPOYL DEHYDROGENASE
AT4G16155	Predicted Enriched domain pair Phylogenetic profile method Co-expression	FSW = 0.0763	Class C: plastid	DIHYDROLIPOYL DEHYDROGENASE
AT3G44610	Predicted Affinity Capture-MS	FSW = 0.2645	Class C: plastid	PROTEIN KINASE FAMILY PROTEIN
AT5G13050	Predicted Affinity Capture-MS	FSW = 0.6050	Class C: plastid	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
AT3G11630	Predicted Affinity Capture-MS	FSW = 0.4111	Class C: plastid	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT3G06040	Predicted Affinity Capture-MS	FSW = 0.5261	Class C: plastid	RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT1G80030	Predicted Affinity Capture-MS	FSW = 0.1945	Class C: plastid	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT5G63980	Predicted Affinity Capture-MS	FSW = 0.0153	Class C: plastid	SAL1 3(2)5-BISPHOSPHATE NUCLEOTIDASE/ INOSITOL OR PHOSPHATIDYLINOSITOL PHOSPHATASE
AT1G07930	Predicted Affinity Capture-MS	FSW = 0.6191	Class C: nucleus	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G60390	Predicted Affinity Capture-MS	FSW = 0.4578	Class C: nucleus	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G45420	Predicted Affinity Capture-MS	FSW = 0.5264	Class C: nucleus	MYB FAMILY TRANSCRIPTION FACTOR
AT5G23740	Predicted Affinity Capture-MS	FSW = 0.4730	Class C: nucleus	RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G27970	Predicted Affinity Capture-MS	FSW = 0.5102	Class C: nucleus	NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT3G13445	Predicted Affinity Capture-MS	FSW = 0.1635	Class C: nucleus	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT5G44500	Predicted Affinity Capture-MS	FSW = 0.4914	Class C: nucleus	SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT5G54840	Predicted Affinity Capture-MS	FSW = 0.0207	Class C: nucleus	SGP1 GTP BINDING
AT5G59870	Predicted Affinity Capture-MS	FSW = 0.6104	Class C: nucleus	HTA6 DNA BINDING
AT2G37470	Predicted Affinity Capture-MS	FSW = 0.4631	Class C: nucleus	HISTONE H2B PUTATIVE
AT4G32470	Predicted Affinity Capture-MS	FSW = 0.6197	Unknown	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT2G20450	Predicted Affinity Capture-MS	FSW = 0.4862	Unknown	60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT3G56190	Predicted Affinity Capture-MS	FSW = 0.4252	Unknown	ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN
AT1G01100	Predicted Affinity Capture-MS	FSW = 0.0057	Unknown	60S ACIDIC RIBOSOMAL PROTEIN P1 (RPP1A)
AT1G22780	Predicted Affinity Capture-MS	FSW = 0.5848	Unknown	PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G08710	Predicted Affinity Capture-MS	FSW = 0.2174	Unknown	ATH9 (THIOREDOXIN H-TYPE 9)
AT3G28710	Predicted Affinity Capture-MS	FSW = 0.0529	Unknown	H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT3G07680	Predicted Affinity Capture-MS	FSW = 0.0210	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT2G19860	Predicted Affinity Capture-MS	FSW = 0.5320	Unknown	HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G08950	Predicted Affinity Capture-MS	FSW = 0.6369	Unknown	ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT3G19980	Predicted Affinity Capture-MS	FSW = 0.4973	Unknown	ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT4G28950	Predicted Affinity Capture-MS	FSW = 0.2028	Unknown	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) GTP BINDING
AT5G23900	Predicted Affinity Capture-MS	FSW = 0.0879	Unknown	60S RIBOSOMAL PROTEIN L13 (RPL13D)
AT1G50310	Predicted Affinity Capture-MS	FSW = 0.2896	Unknown	STP9 (SUGAR TRANSPORTER 9) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G43370	Predicted Affinity Capture-MS	FSW = 0.6041	Unknown	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G22300	Predicted Affinity Capture-MS	FSW = 0.2123	Unknown	GRF10 (GENERAL REGULATORY FACTOR 10) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT5G62300	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.3984	Unknown	40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT4G24400	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.4140	Unknown	CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE
AT4G22120	Predicted Affinity Capture-MS	FSW = 0.1107	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT4G36860	Predicted Affinity Capture-MS	FSW = 0.6185	Unknown	ZINC ION BINDING
AT1G09640	Predicted Affinity Capture-MS	FSW = 0.4682	Unknown	ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE
AT5G59950	Predicted Affinity Capture-MS	FSW = 0.1304	Unknown	RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE
AT3G24170	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.0642	Unknown	ATGR1 (GLUTATHIONE-DISULFIDE REDUCTASE) FAD BINDING / NADP OR NADPH BINDING / GLUTATHIONE-DISULFIDE REDUCTASE/ OXIDOREDUCTASE
AT2G41790	Predicted Affinity Capture-MS	FSW = 0.0402	Unknown	PEPTIDASE M16 FAMILY PROTEIN / INSULINASE FAMILY PROTEIN
AT2G35690	Predicted Affinity Capture-MS	FSW = 0.4501	Unknown	ACX5 (ACYL-COA OXIDASE 5) FAD BINDING / ACYL-COA DEHYDROGENASE/ ACYL-COA OXIDASE/ ELECTRON CARRIER/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-CH GROUP OF DONORS
AT4G00520	Predicted Affinity Capture-MS	FSW = 0.0707	Unknown	ACYL-COA THIOESTERASE FAMILY PROTEIN
AT1G34065	Predicted Affinity Capture-MS	FSW = 0.1846	Unknown	SAMC2 (S-ADENOSYLMETHIONINE CARRIER 2) BINDING
AT2G18450	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2091	Unknown	SDH1-2 SUCCINATE DEHYDROGENASE
AT1G72480	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.4557	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN GOLGI APPARATUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G010701) HAS 422 BLAST HITS TO 420 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 208 FUNGI - 101 PLANTS - 83 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK)
AT2G13650	Predicted Affinity Capture-MS	FSW = 0.5487	Unknown	GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT4G30990	Predicted Affinity Capture-MS	FSW = 0.4984	Unknown	BINDING
AT4G25780	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2679	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT3G52580	Predicted Affinity Capture-MS	FSW = 0.6455	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT5G41480	Predicted Affinity Capture-MS	FSW = 0.5950	Unknown	GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE
AT4G29430	Predicted Affinity Capture-MS	FSW = 0.1081	Unknown	RPS15AE (RIBOSOMAL PROTEIN S15A E) STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G42120	Predicted Affinity Capture-MS	FSW = 0.0147	Unknown	POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT) DNA BINDING / DNA-DIRECTED DNA POLYMERASE
AT3G12530	Predicted Affinity Capture-MS	FSW = 0.5185	Unknown	PSF2
AT3G22880	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.2149	Unknown	DMC1 (DISRUPTION OF MEIOTIC CONTROL 1) ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT4G17190	Predicted Affinity Capture-MS	FSW = 0.0627	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT5G47880	Predicted Affinity Capture-MS	FSW = 0.5222	Unknown	ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT2G24040	Predicted Affinity Capture-MS	FSW = 0.6667	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT4G10920	Predicted Affinity Capture-MS	FSW = 0.1054	Unknown	KELP DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION REGULATOR
AT1G34460	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0824	Unknown	CYCB15 (CYCLIN B15) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G34580	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interologs mapping	FSW = 0.1761	Unknown	MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G51770	Predicted Affinity Capture-MS	FSW = 0.6324	Unknown	UNKNOWN PROTEIN
AT1G62880	Predicted Affinity Capture-MS	FSW = 0.6264	Unknown	CORNICHON FAMILY PROTEIN
AT2G03667	Predicted Affinity Capture-MS	FSW = 0.4480	Unknown	ASPARAGINE SYNTHASE (GLUTAMINE-HYDROLYZING)
AT2G17620	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2385	Unknown	CYCB21 (CYCLIN B21) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G19910	Predicted Affinity Capture-MS	FSW = 0.2939	Unknown	RNA-DEPENDENT RNA POLYMERASE FAMILY PROTEIN
AT2G29390	Predicted Affinity Capture-MS	FSW = 0.4249	Unknown	SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE
AT2G46860	Predicted Affinity Capture-MS	FSW = 0.5662	Unknown	ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT1G05000	Predicted Affinity Capture-MS	FSW = 0.0347	Unknown	TYROSINE SPECIFIC PROTEIN PHOSPHATASE FAMILY PROTEIN
AT1G07830	Predicted Affinity Capture-MS	FSW = 0.0045	Unknown	RIBOSOMAL PROTEIN L29 FAMILY PROTEIN
AT1G10090	Predicted Affinity Capture-MS	FSW = 0.0182	Unknown	UNKNOWN PROTEIN
AT1G11530	Predicted Affinity Capture-MS	FSW = 0.4665	Unknown	ATCXXS1 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1) PROTEIN DISULFIDE ISOMERASE
AT1G20696	Predicted Affinity Capture-MS	FSW = 0.4589	Unknown	HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G20920	Predicted Affinity Capture-MS	FSW = 0.4240	Unknown	DEAD BOX RNA HELICASE PUTATIVE
AT1G31170	Predicted Affinity Capture-MS	FSW = 0.0509	Unknown	SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS
AT1G33110	Predicted Affinity Capture-MS	FSW = 0.5093	Unknown	MATE EFFLUX FAMILY PROTEIN
AT1G55730	Predicted Affinity Capture-MS	FSW = 0.4628	Unknown	ATCAX5 CALCIUMCATION ANTIPORTER/ CATIONCATION ANTIPORTER
AT1G64480	Predicted Affinity Capture-MS	FSW = 0.5917	Unknown	CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING
AT1G71280	Predicted Affinity Capture-MS	FSW = 0.5426	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT1G76720	Predicted Affinity Capture-MS	FSW = 0.5735	Unknown	GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT2G16740	Predicted Affinity Capture-MS	FSW = 0.2045	Unknown	UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE
AT2G21250	Predicted Affinity Capture-MS	FSW = 0.4357	Unknown	MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE
AT2G28720	Predicted Affinity Capture-MS two hybrid	FSW = 0.0232	Unknown	HISTONE H2B PUTATIVE
AT2G35390	Predicted Affinity Capture-MS	FSW = 0.2201	Unknown	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 1 (PRSI)
AT3G02000	Predicted Affinity Capture-MS	FSW = 0.0413	Unknown	ROXY1 DISULFIDE OXIDOREDUCTASE
AT3G05960	Predicted Affinity Capture-MS	FSW = 0.4675	Unknown	STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G12690	Predicted Affinity Capture-MS	FSW = 0.5992	Unknown	AGC15 (AGC KINASE 15) KINASE
AT3G18660	Predicted Affinity Capture-MS	FSW = 0.0533	Unknown	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G19940	Predicted Affinity Capture-MS	FSW = 0.5113	Unknown	SUGAR TRANSPORTER PUTATIVE
AT3G20650	Predicted Affinity Capture-MS	FSW = 0.4320	Unknown	MRNA CAPPING ENZYME FAMILY PROTEIN
AT3G23570	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.5144	Unknown	DIENELACTONE HYDROLASE FAMILY PROTEIN
AT3G30842	Predicted Affinity Capture-MS	FSW = 0.4674	Unknown	PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G52390	Predicted Affinity Capture-MS	FSW = 0.5830	Unknown	TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT3G53880	Predicted Co-purification	FSW = 0.0851	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT3G57550	Predicted Affinity Capture-MS	FSW = 0.2076	Unknown	AGK2 (GUANYLATE KINASE) GUANYLATE KINASE
AT4G10130	Predicted Affinity Capture-MS	FSW = 0.0206	Unknown	DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT4G16440	Predicted Affinity Capture-MS	FSW = 0.0332	Unknown	FERREDOXIN HYDROGENASE
AT4G17770	Predicted Affinity Capture-MS	FSW = 0.5947	Unknown	ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT4G21800	Predicted Affinity Capture-MS	FSW = 0.0691	Unknown	QQT2 (QUATRE-QUART2) ATP BINDING / NUCLEOTIDE BINDING
AT4G26230	Predicted Affinity Capture-MS	FSW = 0.3587	Unknown	60S RIBOSOMAL PROTEIN L31 (RPL31B)
AT4G33070	Predicted Affinity Capture-MS	FSW = 0.1184	Unknown	PYRUVATE DECARBOXYLASE PUTATIVE
AT5G01770	Predicted Affinity Capture-MS	FSW = 0.0202	Unknown	RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G09390	Predicted Affinity Capture-MS	FSW = 0.3678	Unknown	CD2-BINDING PROTEIN-RELATED
AT5G09630	Predicted Affinity Capture-MS	FSW = 0.5109	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT5G19660	Predicted Affinity Capture-MS	FSW = 0.4904	Unknown	S1P (SITE-1 PROTEASE) ENDOPEPTIDASE/ SERINE-TYPE ENDOPEPTIDASE
AT5G28470	Predicted Affinity Capture-MS	FSW = 0.0727	Unknown	TRANSPORTER
AT5G41190	Predicted Affinity Capture-MS	FSW = 0.5447	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G46150	Predicted Affinity Capture-MS	FSW = 0.2412	Unknown	LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT5G67380	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1481	Unknown	CKA1 (CASEIN KINASE ALPHA 1) KINASE
AT3G62770	Predicted Affinity Capture-MS	FSW = 0.4563	Unknown	ATATG18A
AT3G63280	Predicted Affinity Capture-MS	FSW = 0.0404	Unknown	ATNEK4 (NIMA-RELATED KINASE 4) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G25860	Predicted Affinity Capture-MS	FSW = 0.4101	Unknown	ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING
AT4G37680	Predicted Affinity Capture-MS	FSW = 0.0201	Unknown	HHP4 (HEPTAHELICAL PROTEIN 4) RECEPTOR
AT4G39330	Predicted Affinity Capture-MS	FSW = 0.6033	Unknown	CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT5G06150	Predicted Affinity Capture-MS	FSW = 0.0233	Unknown	CYC1BAT CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT5G19820	Predicted Affinity Capture-MS	FSW = 0.4402	Unknown	EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G54200	Predicted Affinity Capture-MS	FSW = 0.3555	Unknown	WD-40 REPEAT FAMILY PROTEIN
AT1G31430	Predicted Gene fusion method	FSW = 0.0084	Unknown	PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN

Downloads

Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

AtPIN will be upgraded. Please send your suggestions here

AT3G16950 - ( LPD1 (LIPOAMIDE DEHYDROGENASE 1) dihydrolipoyl dehydrogenase )

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown