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AT4G24400 - ( CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) kinase/ protein kinase )

126 Proteins interacs with AT4G24400

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT4G17615	Experimental	FSW = 0.0153	Class A: plasma membrane Class D: cytosol (p = 0.67)	CBL1 (CALCINEURIN B-LIKE PROTEIN 1) CALCIUM ION BINDING
AT5G47100	Experimental	FSW = 0.0287	Class A: plasma membrane Class D: cytosol (p = 0.67)	CBL9 CALCIUM ION BINDING
AT5G57050	Experimental two hybrid	FSW = 0.0095	Unknown	ABI2 (ABA INSENSITIVE 2) PROTEIN SERINE/THREONINE PHOSPHATASE
AT2G36160	Predicted Affinity Capture-MS	FSW = 0.2143	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S14 (RPS14A)
AT1G04820	Predicted Phenotypic Enhancement	FSW = 0.0139	Class C: plasma membrane	TUA4 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT3G12580	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1710	Class C: plasma membrane	HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING
AT3G08710	Predicted Affinity Capture-MS	FSW = 0.1988	Class C: plasma membrane	ATH9 (THIOREDOXIN H-TYPE 9)
AT1G18540	Predicted Affinity Capture-MS	FSW = 0.2036	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L6 (RPL6A)
AT1G15210	Predicted Affinity Capture-MS	FSW = 0.3306	Class C: plasma membrane	PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT5G61520	Predicted Affinity Capture-MS Phenotypic Enhancement Affinity Capture-MS Affinity Capture-MS	FSW = 0.0697	Class C: plasma membrane	HEXOSE TRANSPORTER PUTATIVE
AT5G60390	Predicted Affinity Capture-MS	FSW = 0.2520	Class C: plasma membrane	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G45420	Predicted Affinity Capture-MS	FSW = 0.4025	Class C: plasma membrane	MYB FAMILY TRANSCRIPTION FACTOR
AT3G47370	Predicted Affinity Capture-MS	FSW = 0.1274	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S20 (RPS20B)
AT1G27970	Predicted Affinity Capture-MS	FSW = 0.4327	Class C: plasma membrane	NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT2G14120	Predicted Affinity Capture-MS	FSW = 0.1413	Class C: plasma membrane	DYNAMIN-LIKE PROTEIN 2B (ADL2B)
AT3G61430	Predicted Affinity Capture-MS	FSW = 0.2628	Class C: plasma membrane	PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A) WATER CHANNEL
AT4G28950	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2723	Class C: plasma membrane	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) GTP BINDING
AT3G13560	Predicted Affinity Capture-MS	FSW = 0.1621	Class C: plasma membrane	GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT3G09740	Predicted Affinity Capture-MS	FSW = 0.1902	Class C: plasma membrane	SYP71 (SYNTAXIN OF PLANTS 71) PROTEIN TRANSPORTER
AT5G62300	Predicted Affinity Capture-MS	FSW = 0.3962	Class C: plasma membrane	40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT5G23900	Predicted Affinity Capture-MS	FSW = 0.0787	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L13 (RPL13D)
AT1G20760	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.3484	Class C: plasma membrane	CALCIUM-BINDING EF HAND FAMILY PROTEIN
AT5G12350	Predicted Affinity Capture-MS	FSW = 0.1471	Class C: plasma membrane	RAN GTPASE BINDING / CHROMATIN BINDING / ZINC ION BINDING
AT1G13320	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1856	Class C: plasma membrane	PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3) BINDING / PROTEIN PHOSPHATASE TYPE 2A REGULATOR
AT4G36860	Predicted Affinity Capture-MS	FSW = 0.3723	Class C: plasma membrane	ZINC ION BINDING
AT5G19990	Predicted Affinity Capture-MS	FSW = 0.0199	Class C: plasma membrane	RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A) ATPASE
AT5G22780	Predicted Affinity Capture-MS	FSW = 0.0261	Class C: plasma membrane	ADAPTIN FAMILY PROTEIN
AT4G35310	Predicted Affinity Capture-MS	FSW = 0.2801	Class C: plasma membrane	CPK5 (CALMODULIN-DOMAIN PROTEIN KINASE 5) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G07930	Predicted Affinity Capture-MS	FSW = 0.3262	Unknown	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT3G62870	Predicted synthetic growth defect	FSW = 0.0556	Unknown	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT3G20390	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.3662	Unknown	ENDORIBONUCLEASE L-PSP FAMILY PROTEIN
AT2G19860	Predicted Affinity Capture-MS	FSW = 0.3604	Unknown	HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G19980	Predicted Affinity Capture-MS	FSW = 0.2851	Unknown	ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT5G24400	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.3830	Unknown	EMB2024 (EMBRYO DEFECTIVE 2024) 6-PHOSPHOGLUCONOLACTONASE/ CATALYTIC
AT3G16950	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.4140	Unknown	LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT5G65430	Predicted Affinity Capture-MS	FSW = 0.1305	Unknown	GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT2G31170	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.3091	Unknown	SYCO ARATH ATP BINDING / AMINOACYL-TRNA LIGASE/ CYSTEINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT4G26970	Predicted Affinity Capture-MS	FSW = 0.1782	Unknown	ACONITATE HYDRATASE/ COPPER ION BINDING
AT1G51040	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2385	Unknown	PHOSPHATIDYLINOSITOL 4-KINASE PUTATIVE
AT5G13050	Predicted Affinity Capture-MS	FSW = 0.3651	Unknown	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
AT3G11630	Predicted Affinity Capture-MS	FSW = 0.3236	Unknown	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT1G70580	Predicted Affinity Capture-MS	FSW = 0.1206	Unknown	AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2) L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE/ GLYCINE2-OXOGLUTARATE AMINOTRANSFERASE
AT5G44500	Predicted Affinity Capture-MS	FSW = 0.3766	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT4G26600	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1822	Unknown	NUCLEOLAR PROTEIN PUTATIVE
AT2G37470	Predicted Affinity Capture-MS	FSW = 0.3497	Unknown	HISTONE H2B PUTATIVE
AT4G25340	Predicted Affinity Capture-MS	FSW = 0.0149	Unknown	IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT1G34065	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2244	Unknown	SAMC2 (S-ADENOSYLMETHIONINE CARRIER 2) BINDING
AT2G18450	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.3502	Unknown	SDH1-2 SUCCINATE DEHYDROGENASE
AT1G72480	Predicted Affinity Capture-MS	FSW = 0.3133	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN GOLGI APPARATUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G010701) HAS 422 BLAST HITS TO 420 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 208 FUNGI - 101 PLANTS - 83 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK)
AT4G30990	Predicted Affinity Capture-MS	FSW = 0.4054	Unknown	BINDING
AT4G25780	Predicted Affinity Capture-MS	FSW = 0.2529	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT3G08730	Predicted Affinity Capture-MS	FSW = 0.1039	Unknown	PK1 (PROTEIN-SERINE KINASE 1) KINASE/ PROTEIN BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT2G24040	Predicted Affinity Capture-MS	FSW = 0.3537	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT1G77990	Predicted Affinity Capture-MS	FSW = 0.0244	Unknown	AST56 SULFATE TRANSMEMBRANE TRANSPORTER
AT3G52580	Predicted Affinity Capture-MS	FSW = 0.4490	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT5G41480	Predicted Affinity Capture-MS	FSW = 0.4695	Unknown	GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE
AT2G05840	Predicted Affinity Capture-MS	FSW = 0.0296	Unknown	PAA2 (20S PROTEASOME SUBUNIT PAA2) ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT2G42120	Predicted Affinity Capture-MS	FSW = 0.0309	Unknown	POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT) DNA BINDING / DNA-DIRECTED DNA POLYMERASE
AT3G12530	Predicted Affinity Capture-MS	FSW = 0.5158	Unknown	PSF2
AT2G29540	Predicted Affinity Capture-MS	FSW = 0.0286	Unknown	ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT3G22880	Predicted Affinity Capture-MS	FSW = 0.2135	Unknown	DMC1 (DISRUPTION OF MEIOTIC CONTROL 1) ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT1G05910	Predicted Affinity Capture-MS	FSW = 0.1354	Unknown	CELL DIVISION CYCLE PROTEIN 48-RELATED / CDC48-RELATED
AT1G24706	Predicted Affinity Capture-MS	FSW = 0.2008	Unknown	UNKNOWN PROTEIN
AT1G51770	Predicted Affinity Capture-MS	FSW = 0.4027	Unknown	UNKNOWN PROTEIN
AT1G52500	Predicted Phenotypic Suppression	FSW = 0.0258	Unknown	ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G62880	Predicted Affinity Capture-MS	FSW = 0.3923	Unknown	CORNICHON FAMILY PROTEIN
AT1G79210	Predicted Affinity Capture-MS	FSW = 0.1856	Unknown	20S PROTEASOME ALPHA SUBUNIT B PUTATIVE
AT2G17620	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2370	Unknown	CYCB21 (CYCLIN B21) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G19910	Predicted Affinity Capture-MS	FSW = 0.3509	Unknown	RNA-DEPENDENT RNA POLYMERASE FAMILY PROTEIN
AT2G35390	Predicted Affinity Capture-MS	FSW = 0.1670	Unknown	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 1 (PRSI)
AT2G37540	Predicted Affinity Capture-MS	FSW = 0.2129	Unknown	SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT2G39590	Predicted Affinity Capture-MS	FSW = 0.0246	Unknown	40S RIBOSOMAL PROTEIN S15A (RPS15AC)
AT2G46860	Predicted Affinity Capture-MS	FSW = 0.3395	Unknown	ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT3G62770	Predicted Affinity Capture-MS Synthetic Lethality	FSW = 0.3228	Unknown	ATATG18A
AT1G05580	Predicted Affinity Capture-MS	FSW = 0.0308	Unknown	ATCHX23 (CATION/H+ EXCHANGER 23) MONOVALENT CATIONPROTON ANTIPORTER/ SODIUMHYDROGEN ANTIPORTER
AT1G05785	Predicted Affinity Capture-MS	FSW = 0.1756	Unknown	GOT1-LIKE FAMILY PROTEIN
AT1G14310	Predicted Affinity Capture-MS	FSW = 0.1557	Unknown	HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILY PROTEIN
AT1G20696	Predicted Affinity Capture-MS	FSW = 0.2351	Unknown	HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G20920	Predicted Affinity Capture-MS	FSW = 0.4783	Unknown	DEAD BOX RNA HELICASE PUTATIVE
AT1G34460	Predicted Affinity Capture-MS	FSW = 0.1023	Unknown	CYCB15 (CYCLIN B15) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G35350	Predicted Synthetic Lethality	FSW = 0.0181	Unknown	LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G48605	Predicted Affinity Capture-MS	FSW = 0.0126	Unknown	ATHAL3B FMN BINDING / ELECTRON CARRIER/ PHOSPHOPANTOTHENOYLCYSTEINE DECARBOXYLASE
AT1G54290	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1691	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT1G55730	Predicted Affinity Capture-MS	FSW = 0.5662	Unknown	ATCAX5 CALCIUMCATION ANTIPORTER/ CATIONCATION ANTIPORTER
AT1G63370	Predicted Affinity Capture-MS	FSW = 0.0975	Unknown	FLAVIN-CONTAINING MONOOXYGENASE FAMILY PROTEIN / FMO FAMILY PROTEIN
AT1G64480	Predicted Affinity Capture-MS	FSW = 0.4212	Unknown	CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING
AT1G66240	Predicted Affinity Capture-MS	FSW = 0.0688	Unknown	ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1) METAL ION BINDING
AT1G78970	Predicted Affinity Capture-MS	FSW = 0.1451	Unknown	LUP1 (LUPEOL SYNTHASE 1) BETA-AMYRIN SYNTHASE/ LUPEOL SYNTHASE
AT2G16090	Predicted Affinity Capture-MS	FSW = 0.1987	Unknown	ZINC FINGER PROTEIN-RELATED
AT2G16740	Predicted Affinity Capture-MS Synthetic Lethality	FSW = 0.3492	Unknown	UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE
AT2G20290	Predicted Affinity Capture-MS	FSW = 0.0441	Unknown	XIG MOTOR/ PROTEIN BINDING
AT2G21250	Predicted Affinity Capture-MS	FSW = 0.3622	Unknown	MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE
AT2G47090	Predicted Synthetic Lethality	FSW = 0.0114	Unknown	NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT2G47760	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1695	Unknown	ALG3 ALPHA-13-MANNOSYLTRANSFERASE/ CATALYTIC
AT3G02000	Predicted Affinity Capture-MS	FSW = 0.1171	Unknown	ROXY1 DISULFIDE OXIDOREDUCTASE
AT3G03590	Predicted Affinity Capture-MS	FSW = 0.1794	Unknown	SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN
AT3G05960	Predicted Affinity Capture-MS	FSW = 0.4102	Unknown	STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G12200	Predicted Affinity Capture-MS	FSW = 0.0508	Unknown	ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G12690	Predicted Affinity Capture-MS	FSW = 0.3176	Unknown	AGC15 (AGC KINASE 15) KINASE
AT3G19940	Predicted Affinity Capture-MS	FSW = 0.3567	Unknown	SUGAR TRANSPORTER PUTATIVE
AT3G20650	Predicted Affinity Capture-MS	FSW = 0.3130	Unknown	MRNA CAPPING ENZYME FAMILY PROTEIN
AT3G22290	Predicted Synthetic Lethality	FSW = 0.0182	Unknown	UNKNOWN PROTEIN
AT3G23570	Predicted Affinity Capture-MS	FSW = 0.5621	Unknown	DIENELACTONE HYDROLASE FAMILY PROTEIN
AT3G30842	Predicted Affinity Capture-MS	FSW = 0.3077	Unknown	PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G52390	Predicted Affinity Capture-MS	FSW = 0.4933	Unknown	TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT3G53510	Predicted Affinity Capture-MS	FSW = 0.2419	Unknown	ABC TRANSPORTER FAMILY PROTEIN
AT4G27130	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.0207	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G33070	Predicted Affinity Capture-MS	FSW = 0.0968	Unknown	PYRUVATE DECARBOXYLASE PUTATIVE
AT4G33200	Predicted Affinity Capture-MS	FSW = 0.0309	Unknown	XI-I MOTOR/ PROTEIN BINDING
AT5G02560	Predicted Affinity Capture-MS	FSW = 0.1361	Unknown	HTA12 DNA BINDING
AT5G09630	Predicted Affinity Capture-MS	FSW = 0.3594	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT5G16140	Predicted Affinity Capture-MS	FSW = 0.0173	Unknown	PEPTIDYL-TRNA HYDROLASE FAMILY PROTEIN
AT5G17000	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2563	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G41190	Predicted Affinity Capture-MS	FSW = 0.3919	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G46150	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.3576	Unknown	LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT5G54200	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.4366	Unknown	WD-40 REPEAT FAMILY PROTEIN
AT5G57890	Predicted Affinity Capture-MS	FSW = 0.2319	Unknown	ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT5G57950	Predicted Affinity Capture-MS	FSW = 0.0120	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE
AT5G67380	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.2552	Unknown	CKA1 (CASEIN KINASE ALPHA 1) KINASE
AT4G36800	Predicted Affinity Capture-MS	FSW = 0.2356	Unknown	RCE1 (RUB1 CONJUGATING ENZYME 1) NEDD8 LIGASE/ SMALL CONJUGATING PROTEIN LIGASE
AT4G39330	Predicted Affinity Capture-MS	FSW = 0.5727	Unknown	CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT5G06420	Predicted Affinity Capture-MS	FSW = 0.3018	Unknown	ZINC FINGER (CCCH-TYPE/C3HC4-TYPE RING FINGER) FAMILY PROTEIN
AT5G19820	Predicted Affinity Capture-MS	FSW = 0.3165	Unknown	EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G10930	Predicted Gene fusion method Co-expression	FSW = 0.0542	Unknown	CIPK5 (CBL-INTERACTING PROTEIN KINASE 5) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G49600	Predicted Gene fusion method	FSW = 0.0292	Unknown	ATRBP47A (ARABIDOPSIS THALIANA RNA-BINDING PROTEIN 47A) RNA BINDING
AT5G60870	Predicted Gene fusion method	FSW = 0.0753	Unknown	REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN

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Proteins

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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AT4G24400 - ( CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) kinase/ protein kinase )

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