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AT3G19940 - ( sugar transporter putative )

121 Proteins interacs with AT3G19940

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT4G32470	Predicted Affinity Capture-MS	FSW = 0.5364	Unknown	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT2G48020	Predicted Phylogenetic profile method	FSW = 0.2818	Unknown	SUGAR TRANSPORTER PUTATIVE
AT2G20450	Predicted Affinity Capture-MS	FSW = 0.4470	Unknown	60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT3G08710	Predicted Affinity Capture-MS	FSW = 0.1621	Unknown	ATH9 (THIOREDOXIN H-TYPE 9)
AT3G56190	Predicted Affinity Capture-MS	FSW = 0.3532	Unknown	ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN
AT1G11260	Predicted Phylogenetic profile method Co-expression	FSW = 0.2297	Unknown	STP1 (SUGAR TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G22780	Predicted Affinity Capture-MS	FSW = 0.4914	Unknown	PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G07930	Predicted Affinity Capture-MS	FSW = 0.5191	Unknown	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT3G03090	Predicted Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.3094	Unknown	ATVGT1 (ARABIDOPSIS THALIANA VACUOLAR GLUCOSE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ FRUCTOSE TRANSMEMBRANE TRANSPORTER/ GLUCOSE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G19450	Predicted Phylogenetic profile method Co-expression	FSW = 0.2625	Unknown	INTEGRAL MEMBRANE PROTEIN PUTATIVE / SUGAR TRANSPORTER FAMILY PROTEIN
AT1G75220	Predicted Phylogenetic profile method	FSW = 0.2625	Unknown	INTEGRAL MEMBRANE PROTEIN PUTATIVE
AT3G62870	Predicted synthetic growth defect two hybrid	FSW = 0.0465	Unknown	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT5G26030	Predicted two hybrid	FSW = 0.0123	Unknown	FC1 (FERROCHELATASE 1) FERROCHELATASE
AT3G08950	Predicted Affinity Capture-MS	FSW = 0.5382	Unknown	ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT2G19860	Predicted Affinity Capture-MS	FSW = 0.4521	Unknown	HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G19980	Predicted Affinity Capture-MS	FSW = 0.4385	Unknown	ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT1G15210	Predicted Affinity Capture-MS	FSW = 0.5061	Unknown	PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT5G61520	Predicted Gene fusion method Co-expression	FSW = 0.0895	Unknown	HEXOSE TRANSPORTER PUTATIVE
AT3G16950	Predicted Affinity Capture-MS	FSW = 0.5113	Unknown	LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT4G26970	Predicted Affinity Capture-MS	FSW = 0.1548	Unknown	ACONITATE HYDRATASE/ COPPER ION BINDING
AT5G59250	Predicted Phylogenetic profile method Co-expression	FSW = 0.3097	Unknown	SUGAR TRANSPORTER FAMILY PROTEIN
AT1G07420	Predicted two hybrid interaction prediction	FSW = 0.0047	Unknown	SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE
AT3G44610	Predicted Affinity Capture-MS	FSW = 0.1986	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT5G13050	Predicted Affinity Capture-MS	FSW = 0.5034	Unknown	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
AT1G80030	Predicted Synthetic Lethality	FSW = 0.1011	Unknown	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT3G11630	Predicted Affinity Capture-MS	FSW = 0.3090	Unknown	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT1G17745	Predicted interaction prediction	FSW = 0.0094	Unknown	PGDH (3-PHOSPHOGLYCERATE DEHYDROGENASE) PHOSPHOGLYCERATE DEHYDROGENASE
AT5G60390	Predicted Affinity Capture-MS	FSW = 0.3915	Unknown	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G45420	Predicted Affinity Capture-MS	FSW = 0.4642	Unknown	MYB FAMILY TRANSCRIPTION FACTOR
AT5G23740	Predicted Affinity Capture-MS	FSW = 0.4488	Unknown	RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G27970	Predicted Affinity Capture-MS	FSW = 0.5018	Unknown	NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT3G61430	Predicted Affinity Capture-MS	FSW = 0.0899	Unknown	PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A) WATER CHANNEL
AT2G21540	Predicted Affinity Capture-MS	FSW = 0.1280	Unknown	SFH3 (SEC14-LIKE 3) PHOSPHATIDYLINOSITOL TRANSPORTER
AT3G18830	Predicted Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.3150	Unknown	ATPLT5 (POLYOL TRANSPORTER 5) D-RIBOSE TRANSMEMBRANE TRANSPORTER/ D-XYLOSE TRANSMEMBRANE TRANSPORTER/ CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ GALACTOSE TRANSMEMBRANE TRANSPORTER/ GLUCOSE TRANSMEMBRANE TRANSPORTER/ GLYCEROL TRANSMEMBRANE TRANSPORTER/ MANN
AT5G62300	Predicted Affinity Capture-MS	FSW = 0.4173	Unknown	40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT5G43370	Predicted Affinity Capture-MS	FSW = 0.5269	Unknown	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G50310	Predicted Phylogenetic profile method Co-expression	FSW = 0.3320	Unknown	STP9 (SUGAR TRANSPORTER 9) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G19930	Predicted Gene fusion method Co-expression	FSW = 0.0442	Unknown	STP4 (SUGAR TRANSPORTER 4) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUCROSEHYDROGEN SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT1G13320	Predicted Affinity Capture-MS	FSW = 0.1812	Unknown	PP2AA3 (PROTEIN PHOSPHATASE 2A SUBUNIT A3) BINDING / PROTEIN PHOSPHATASE TYPE 2A REGULATOR
AT4G02050	Predicted Phylogenetic profile method Co-expression	FSW = 0.1514	Unknown	SUGAR TRANSPORTER PUTATIVE
AT4G24400	Predicted Affinity Capture-MS	FSW = 0.3567	Unknown	CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE
AT5G23270	Predicted Phenotypic Enhancement Gene fusion method Phylogenetic profile method Co-expression	FSW = 0.3433	Unknown	STP11 (SUGAR TRANSPORTER 11) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G20760	Predicted Affinity Capture-MS	FSW = 0.1252	Unknown	CALCIUM-BINDING EF HAND FAMILY PROTEIN
AT4G36860	Predicted Affinity Capture-MS	FSW = 0.5492	Unknown	ZINC ION BINDING
AT2G18040	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0023	Unknown	PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE NIMA-INTERACTING 1) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT1G09640	Predicted Affinity Capture-MS	FSW = 0.4168	Unknown	ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE
AT2G35690	Predicted Affinity Capture-MS	FSW = 0.4022	Unknown	ACX5 (ACYL-COA OXIDASE 5) FAD BINDING / ACYL-COA DEHYDROGENASE/ ACYL-COA OXIDASE/ ELECTRON CARRIER/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-CH GROUP OF DONORS
AT2G30260	Predicted Affinity Capture-MS	FSW = 0.0168	Unknown	U2B (U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B) RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT4G26600	Predicted Affinity Capture-MS	FSW = 0.0746	Unknown	NUCLEOLAR PROTEIN PUTATIVE
AT5G59870	Predicted Affinity Capture-MS	FSW = 0.5136	Unknown	HTA6 DNA BINDING
AT5G44500	Predicted Affinity Capture-MS	FSW = 0.4541	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT1G03190	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0029	Unknown	UVH6 (ULTRAVIOLET HYPERSENSITIVE 6) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ ATP-DEPENDENT HELICASE/ DNA BINDING / HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING
AT2G40290	Predicted Affinity Capture-MS	FSW = 0.0141	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 PUTATIVE / EIF-2A PUTATIVE / EIF-2-ALPHA PUTATIVE
AT2G37470	Predicted Affinity Capture-MS	FSW = 0.4116	Unknown	HISTONE H2B PUTATIVE
AT3G55605	Predicted Affinity Capture-MS	FSW = 0.0203	Unknown	MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN / MAM33 FAMILY PROTEIN
AT3G10920	Predicted Affinity Capture-MS	FSW = 0.1177	Unknown	MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1) METAL ION BINDING / SUPEROXIDE DISMUTASE
AT1G72480	Predicted Affinity Capture-MS	FSW = 0.4303	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN GOLGI APPARATUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G010701) HAS 422 BLAST HITS TO 420 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 208 FUNGI - 101 PLANTS - 83 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK)
AT2G13650	Predicted Affinity Capture-MS	FSW = 0.4784	Unknown	GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT4G30990	Predicted Affinity Capture-MS	FSW = 0.3963	Unknown	BINDING
AT4G25780	Predicted Affinity Capture-MS	FSW = 0.2209	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT3G05150	Predicted Phylogenetic profile method	FSW = 0.2744	Unknown	SUGAR TRANSPORTER FAMILY PROTEIN
AT3G52580	Predicted Affinity Capture-MS	FSW = 0.5243	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT5G41480	Predicted Affinity Capture-MS	FSW = 0.4510	Unknown	GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE
AT2G24040	Predicted Affinity Capture-MS	FSW = 0.5534	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT3G12530	Predicted Affinity Capture-MS	FSW = 0.3976	Unknown	PSF2
AT5G49060	Predicted Affinity Capture-MS	FSW = 0.0111	Unknown	DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT5G47880	Predicted Affinity Capture-MS	FSW = 0.4507	Unknown	ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT1G51770	Predicted Affinity Capture-MS	FSW = 0.5622	Unknown	UNKNOWN PROTEIN
AT1G62880	Predicted Affinity Capture-MS	FSW = 0.5758	Unknown	CORNICHON FAMILY PROTEIN
AT1G64480	Predicted Affinity Capture-MS	FSW = 0.5511	Unknown	CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING
AT1G71280	Predicted Affinity Capture-MS	FSW = 0.4525	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT2G03667	Predicted Affinity Capture-MS	FSW = 0.4714	Unknown	ASPARAGINE SYNTHASE (GLUTAMINE-HYDROLYZING)
AT2G16740	Predicted Affinity Capture-MS Affinity Capture-MS Synthetic Lethality	FSW = 0.1727	Unknown	UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE
AT2G17620	Predicted Affinity Capture-MS	FSW = 0.2574	Unknown	CYCB21 (CYCLIN B21) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G19910	Predicted Affinity Capture-MS	FSW = 0.2616	Unknown	RNA-DEPENDENT RNA POLYMERASE FAMILY PROTEIN
AT2G21250	Predicted Affinity Capture-MS	FSW = 0.3315	Unknown	MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE
AT2G29390	Predicted Affinity Capture-MS	FSW = 0.3153	Unknown	SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE
AT2G42160	Predicted Affinity Capture-MS	FSW = 0.2328	Unknown	ZINC FINGER (UBIQUITIN-HYDROLASE) DOMAIN-CONTAINING PROTEIN
AT2G46860	Predicted Affinity Capture-MS	FSW = 0.5113	Unknown	ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT1G05000	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0242	Unknown	TYROSINE SPECIFIC PROTEIN PHOSPHATASE FAMILY PROTEIN
AT1G08750	Predicted two hybrid interaction prediction	FSW = 0.0047	Unknown	GPI-ANCHOR TRANSAMIDASE PUTATIVE
AT1G11530	Predicted Affinity Capture-MS	FSW = 0.4529	Unknown	ATCXXS1 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1) PROTEIN DISULFIDE ISOMERASE
AT1G11930	Predicted Affinity Capture-MS	FSW = 0.0068	Unknown	ALANINE RACEMASE FAMILY PROTEIN
AT1G20696	Predicted Affinity Capture-MS	FSW = 0.3959	Unknown	HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G20920	Predicted Affinity Capture-MS	FSW = 0.2959	Unknown	DEAD BOX RNA HELICASE PUTATIVE
AT1G49490	Predicted Affinity Capture-MS	FSW = 0.0052	Unknown	LEUCINE-RICH REPEAT FAMILY PROTEIN / EXTENSIN FAMILY PROTEIN
AT1G50030	Predicted co-fractionation Co-fractionation	FSW = 0.0096	Unknown	TOR (TARGET OF RAPAMYCIN) 1-PHOSPHATIDYLINOSITOL-3-KINASE/ PROTEIN BINDING
AT1G55730	Predicted Affinity Capture-MS	FSW = 0.3767	Unknown	ATCAX5 CALCIUMCATION ANTIPORTER/ CATIONCATION ANTIPORTER
AT3G05960	Predicted Affinity Capture-MS	FSW = 0.4214	Unknown	STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G12690	Predicted Affinity Capture-MS	FSW = 0.5357	Unknown	AGC15 (AGC KINASE 15) KINASE
AT3G20650	Predicted Affinity Capture-MS	FSW = 0.4527	Unknown	MRNA CAPPING ENZYME FAMILY PROTEIN
AT3G30842	Predicted Affinity Capture-MS	FSW = 0.4775	Unknown	PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT4G17770	Predicted Affinity Capture-MS	FSW = 0.5027	Unknown	ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT5G04510	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0063	Unknown	PDK1 (3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1) 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE/ KINASE/ PHOSPHOINOSITIDE BINDING / PROTEIN BINDING / PROTEIN KINASE
AT5G09630	Predicted Affinity Capture-MS	FSW = 0.4639	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT5G19150	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1304	Unknown	CARBOHYDRATE KINASE FAMILY
AT5G19660	Predicted Affinity Capture-MS	FSW = 0.4286	Unknown	S1P (SITE-1 PROTEASE) ENDOPEPTIDASE/ SERINE-TYPE ENDOPEPTIDASE
AT5G19680	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0040	Unknown	LEUCINE-RICH REPEAT FAMILY PROTEIN
AT5G57890	Predicted Affinity Capture-MS	FSW = 0.1911	Unknown	ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT3G62770	Predicted Affinity Capture-MS	FSW = 0.3893	Unknown	ATATG18A
AT4G25860	Predicted Affinity Capture-MS	FSW = 0.4444	Unknown	ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING
AT4G26230	Predicted Affinity Capture-MS	FSW = 0.3049	Unknown	60S RIBOSOMAL PROTEIN L31 (RPL31B)
AT4G39330	Predicted Affinity Capture-MS	FSW = 0.4923	Unknown	CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT5G19820	Predicted Affinity Capture-MS	FSW = 0.3758	Unknown	EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G41190	Predicted Affinity Capture-MS	FSW = 0.4207	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G54200	Predicted Affinity Capture-MS	FSW = 0.2802	Unknown	WD-40 REPEAT FAMILY PROTEIN
AT3G19020	Predicted interaction prediction	FSW = 0.0081	Unknown	LEUCINE-RICH REPEAT FAMILY PROTEIN / EXTENSIN FAMILY PROTEIN
AT1G08930	Predicted Phylogenetic profile method Co-expression	FSW = 0.3035	Unknown	ERD6 (EARLY RESPONSE TO DEHYDRATION 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGAR TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G54730	Predicted Phylogenetic profile method Co-expression	FSW = 0.2978	Unknown	SUGAR TRANSPORTER PUTATIVE
AT4G21480	Predicted Phylogenetic profile method Co-expression	FSW = 0.0494	Unknown	CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G18840	Predicted Phylogenetic profile method Co-expression	FSW = 0.2922	Unknown	SUGAR TRANSPORTER PUTATIVE
AT1G79820	Predicted Phylogenetic profile method Co-expression	FSW = 0.2545	Unknown	SGB1 (SUPPRESSOR OF G PROTEIN BETA1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G05030	Predicted Phylogenetic profile method Co-expression	FSW = 0.3374	Unknown	HEXOSE TRANSPORTER PUTATIVE
AT4G04750	Predicted Phylogenetic profile method Co-expression	FSW = 0.2978	Unknown	CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT2G18480	Predicted Phylogenetic profile method Co-expression	FSW = 0.3383	Unknown	MANNITOL TRANSPORTER PUTATIVE
AT3G05400	Predicted Phylogenetic profile method Co-expression	FSW = 0.2328	Unknown	SUGAR TRANSPORTER PUTATIVE
AT2G16120	Predicted Phylogenetic profile method	FSW = 0.1988	Unknown	MANNITOL TRANSPORTER PUTATIVE
AT3G05165	Predicted Phylogenetic profile method	FSW = 0.2744	Unknown	SUGAR TRANSPORTER PUTATIVE
AT2G20780	Predicted Phylogenetic profile method	FSW = 0.2741	Unknown	MANNITOL TRANSPORTER PUTATIVE
AT4G36670	Predicted Phylogenetic profile method	FSW = 0.2806	Unknown	MANNITOL TRANSPORTER PUTATIVE
AT3G05160	Predicted Phylogenetic profile method	FSW = 0.2861	Unknown	SUGAR TRANSPORTER PUTATIVE

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Proteins

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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AT3G19940 - ( sugar transporter putative )

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