Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G32470 - ( ubiquinol-cytochrome C reductase complex 14 kDa protein putative )

96 Proteins interacs with AT4G32470
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT2G07727

Experimental

FSW = 0.0211

Class B:

vacuole

unclear

nucleus

mitochondrion

Class D:

mitochondrion (p = 0.82)

CYTOCHROME B (MTCYB) (COB) (CYTB)
AT3G16890

Experimental

co-fractionation

Co-fractionation

co-fractionation

Co-fractionation

FSW = 0.0317

Unknown

PPR40 (PENTATRICOPEPTIDE (PPR) DOMAIN PROTEIN 40)
AT1G07930Predicted

Affinity Capture-MS

FSW = 0.6659

Class C:

vacuole

mitochondrion

ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT2G20450

Predicted

Affinity Capture-MS

FSW = 0.5841

Class C:

vacuole

60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT3G56190

Predicted

Affinity Capture-MS

FSW = 0.4710

Class C:

vacuole

ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN
AT1G22780

Predicted

Affinity Capture-MS

FSW = 0.6748

Class C:

vacuole

PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G62150

Predicted

Affinity Capture-MS

FSW = 0.1976

Class C:

vacuole

PGP21 (P-GLYCOPROTEIN 21) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT2G19860

Predicted

Affinity Capture-MS

FSW = 0.5915

Class C:

unclear

mitochondrion

HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G08950

Predicted

Affinity Capture-MS

FSW = 0.7232

Class C:

unclear

mitochondrion

ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT5G20020

Predicted

Affinity Capture-MS

FSW = 0.0686

Class C:

unclear

RAN2 GTP BINDING / GTPASE/ PROTEIN BINDING
AT3G19980

Predicted

Affinity Capture-MS

FSW = 0.5429

Class C:

unclear

ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT2G31170

Predicted

Affinity Capture-MS

FSW = 0.2119

Class C:

mitochondrion

SYCO ARATH ATP BINDING / AMINOACYL-TRNA LIGASE/ CYSTEINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT5G60390

Predicted

Affinity Capture-MS

FSW = 0.4802

Class C:

mitochondrion

ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G25450

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.0891

Class C:

mitochondrion

UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT3G20970

Predicted

Affinity Capture-MS

FSW = 0.1326

Class C:

mitochondrion

NFU4 STRUCTURAL MOLECULE
AT3G08530

Predicted

Affinity Capture-MS

FSW = 0.0855

Unknown

CLATHRIN HEAVY CHAIN PUTATIVE
AT1G15210

Predicted

Affinity Capture-MS

FSW = 0.7554

Unknown

PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT5G24400

Predicted

Affinity Capture-MS

FSW = 0.2227

Unknown

EMB2024 (EMBRYO DEFECTIVE 2024) 6-PHOSPHOGLUCONOLACTONASE/ CATALYTIC
AT3G16950

Predicted

Affinity Capture-MS

FSW = 0.6197

Unknown

LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT3G44610

Predicted

Affinity Capture-MS

FSW = 0.2529

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT5G13050

Predicted

Affinity Capture-MS

FSW = 0.6242

Unknown

5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
AT3G11630

Predicted

Affinity Capture-MS

FSW = 0.3766

Unknown

2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT3G06040

Predicted

Affinity Capture-MS

FSW = 0.5844

Unknown

RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT4G23430

Predicted

Synthetic Lethality

FSW = 0.0728

Unknown

SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT1G80030

Predicted

Affinity Capture-MS

FSW = 0.0975

Unknown

DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT5G23740

Predicted

Affinity Capture-MS

FSW = 0.6157

Unknown

RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G27970

Predicted

Affinity Capture-MS

FSW = 0.5883

Unknown

NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT5G62300

Predicted

Affinity Capture-MS

FSW = 0.4184

Unknown

40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT1G50310

Predicted

Affinity Capture-MS

FSW = 0.3926

Unknown

STP9 (SUGAR TRANSPORTER 9) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G43370

Predicted

Affinity Capture-MS

FSW = 0.7232

Unknown

APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G12350

Predicted

Affinity Capture-MS

FSW = 0.0917

Unknown

RAN GTPASE BINDING / CHROMATIN BINDING / ZINC ION BINDING
AT4G36860

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.6893

Unknown

ZINC ION BINDING
AT1G09640

Predicted

Affinity Capture-MS

FSW = 0.5882

Unknown

ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE
AT4G18800

Predicted

Affinity Capture-MS

FSW = 0.0049

Unknown

ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING
AT2G35690

Predicted

Affinity Capture-MS

FSW = 0.4852

Unknown

ACX5 (ACYL-COA OXIDASE 5) FAD BINDING / ACYL-COA DEHYDROGENASE/ ACYL-COA OXIDASE/ ELECTRON CARRIER/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-CH GROUP OF DONORS
AT5G44500

Predicted

Affinity Capture-MS

FSW = 0.5250

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT5G59870

Predicted

Affinity Capture-MS

FSW = 0.6813

Unknown

HTA6 DNA BINDING
AT3G13445

Predicted

Affinity Capture-MS

FSW = 0.1777

Unknown

TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT2G37470

Predicted

Affinity Capture-MS

FSW = 0.4755

Unknown

HISTONE H2B PUTATIVE
AT1G72480

Predicted

Affinity Capture-MS

FSW = 0.4909

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN GOLGI APPARATUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G010701) HAS 422 BLAST HITS TO 420 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 208 FUNGI - 101 PLANTS - 83 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK)
AT2G13650

Predicted

Affinity Capture-MS

FSW = 0.6445

Unknown

GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT4G30990

Predicted

Affinity Capture-MS

FSW = 0.4624

Unknown

BINDING
AT5G57625

Predicted

Affinity Capture-MS

FSW = 0.1428

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT3G52580

Predicted

Affinity Capture-MS

FSW = 0.7196

Unknown

40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT5G41480

Predicted

Affinity Capture-MS

FSW = 0.6288

Unknown

GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE
AT3G12530

Predicted

Affinity Capture-MS

FSW = 0.5350

Unknown

PSF2
AT5G47880

Predicted

Affinity Capture-MS

FSW = 0.6337

Unknown

ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT2G24040

Predicted

Affinity Capture-MS

FSW = 0.7067

Unknown

HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT1G26480

Predicted

Affinity Capture-MS

FSW = 0.1010

Unknown

GRF12 (GENERAL REGULATORY FACTOR 12) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G51770

Predicted

Affinity Capture-MS

FSW = 0.7052

Unknown

UNKNOWN PROTEIN
AT1G62880

Predicted

Affinity Capture-MS

FSW = 0.6986

Unknown

CORNICHON FAMILY PROTEIN
AT1G71280

Predicted

Affinity Capture-MS

FSW = 0.6039

Unknown

DEAD/DEAH BOX HELICASE PUTATIVE
AT2G03667

Predicted

Affinity Capture-MS

FSW = 0.4803

Unknown

ASPARAGINE SYNTHASE (GLUTAMINE-HYDROLYZING)
AT2G29390

Predicted

Affinity Capture-MS

FSW = 0.4977

Unknown

SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE
AT2G42160

Predicted

Affinity Capture-MS

FSW = 0.3039

Unknown

ZINC FINGER (UBIQUITIN-HYDROLASE) DOMAIN-CONTAINING PROTEIN
AT2G46860

Predicted

Affinity Capture-MS

FSW = 0.6611

Unknown

ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT3G62770

Predicted

Affinity Capture-MS

FSW = 0.4315

Unknown

ATATG18A
AT4G25860

Predicted

Affinity Capture-MS

FSW = 0.5348

Unknown

ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING
AT4G26230

Predicted

Affinity Capture-MS

FSW = 0.4064

Unknown

60S RIBOSOMAL PROTEIN L31 (RPL31B)
AT1G11530

Predicted

Affinity Capture-MS

FSW = 0.5852

Unknown

ATCXXS1 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1) PROTEIN DISULFIDE ISOMERASE
AT1G20696

Predicted

Affinity Capture-MS

FSW = 0.5326

Unknown

HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G33090

Predicted

Affinity Capture-MS

FSW = 0.1723

Unknown

MATE EFFLUX FAMILY PROTEIN
AT1G33110

Predicted

Affinity Capture-MS

FSW = 0.6111

Unknown

MATE EFFLUX FAMILY PROTEIN
AT1G63660

Predicted

Affinity Capture-MS

FSW = 0.1334

Unknown

GMP SYNTHASE (GLUTAMINE-HYDROLYZING) PUTATIVE / GLUTAMINE AMIDOTRANSFERASE PUTATIVE
AT1G64480

Predicted

Affinity Capture-MS

FSW = 0.6829

Unknown

CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING
AT1G76720

Predicted

Affinity Capture-MS

FSW = 0.6688

Unknown

GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT2G16740

Predicted

Synthetic Lethality

FSW = 0.1722

Unknown

UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE
AT2G21250

Predicted

Affinity Capture-MS

FSW = 0.3661

Unknown

MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE
AT2G35390

Predicted

Affinity Capture-MS

FSW = 0.1792

Unknown

RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 1 (PRSI)
AT2G43360

Predicted

Affinity Capture-MS

FSW = 0.2646

Unknown

BIO2 (BIOTIN AUXOTROPH 2) BIOTIN SYNTHASE
AT2G47570

Predicted

Affinity Capture-MS

FSW = 0.0957

Unknown

60S RIBOSOMAL PROTEIN L18 (RPL18A)
AT3G05540

Predicted

Affinity Capture-MS

FSW = 0.2593

Unknown

INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CYTOPLASM CONTAINS INTERPRO DOMAIN/S TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN (INTERPROIPR018105) TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR001983) MSS4/TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR011323) TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN CONSERVED SITE (INTERPROIPR018103) MSS4-LIKE (INTERPROIPR011057) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) (TAIRAT3G166401) HAS 640 BLAST HITS TO 640 PROTEINS IN 231 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 343 FUNGI - 110 PLANTS - 105 VIRUSES - 0 OTHER EUKARYOTES - 82 (SOURCE NCBI BLINK)
AT3G05960

Predicted

Affinity Capture-MS

FSW = 0.4465

Unknown

STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G12690

Predicted

Affinity Capture-MS

FSW = 0.6800

Unknown

AGC15 (AGC KINASE 15) KINASE
AT3G19940

Predicted

Affinity Capture-MS

FSW = 0.5364

Unknown

SUGAR TRANSPORTER PUTATIVE
AT3G20650

Predicted

Affinity Capture-MS

FSW = 0.4291

Unknown

MRNA CAPPING ENZYME FAMILY PROTEIN
AT3G23570

Predicted

Affinity Capture-MS

FSW = 0.4798

Unknown

DIENELACTONE HYDROLASE FAMILY PROTEIN
AT3G30842

Predicted

Affinity Capture-MS

FSW = 0.4964

Unknown

PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G48780

Predicted

Affinity Capture-MS

FSW = 0.0795

Unknown

SPT1 (SERINE PALMITOYLTRANSFERASE 1) SERINE C-PALMITOYLTRANSFERASE
AT3G52390

Predicted

Affinity Capture-MS

FSW = 0.5732

Unknown

TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT3G53510

Predicted

Affinity Capture-MS

FSW = 0.3359

Unknown

ABC TRANSPORTER FAMILY PROTEIN
AT3G57550

Predicted

Affinity Capture-MS

FSW = 0.1910

Unknown

AGK2 (GUANYLATE KINASE) GUANYLATE KINASE
AT3G59410

Predicted

Affinity Capture-MS

FSW = 0.1777

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT4G17770

Predicted

Affinity Capture-MS

FSW = 0.6763

Unknown

ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT5G09390

Predicted

Affinity Capture-MS

FSW = 0.4714

Unknown

CD2-BINDING PROTEIN-RELATED
AT5G09630

Predicted

Affinity Capture-MS

FSW = 0.6071

Unknown

PROTEIN BINDING / ZINC ION BINDING
AT5G19150

Predicted

Affinity Capture-MS

FSW = 0.2007

Unknown

CARBOHYDRATE KINASE FAMILY
AT5G19660

Predicted

Affinity Capture-MS

FSW = 0.5852

Unknown

S1P (SITE-1 PROTEASE) ENDOPEPTIDASE/ SERINE-TYPE ENDOPEPTIDASE
AT5G41190

Predicted

Affinity Capture-MS

FSW = 0.5562

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G46150

Predicted

Affinity Capture-MS

FSW = 0.2596

Unknown

LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT5G54200

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.3195

Unknown

WD-40 REPEAT FAMILY PROTEIN
AT5G57890

Predicted

Affinity Capture-MS

FSW = 0.3016

Unknown

ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT5G67380

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.1158

Unknown

CKA1 (CASEIN KINASE ALPHA 1) KINASE
AT4G39330

Predicted

Affinity Capture-MS

FSW = 0.6093

Unknown

CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT5G19820

Predicted

Affinity Capture-MS

FSW = 0.5119

Unknown

EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT1G34770

Predicted

two hybrid

FSW = 0.0209

Unknown

MAGE-8 ANTIGEN-RELATED

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454