AtPIN will be upgraded. Please send your suggestions here

AT3G19980 - ( ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) protein binding / protein serine/threonine kinase/ protein serine/threonine phosphatase )

153 Proteins interacs with AT3G19980

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G18790	Experimental in vitro	FSW = 0.0069	Class B: unclear nucleus cytosol Class D: cytosol (p = 0.67)	PHYB (PHYTOCHROME B) G-PROTEIN COUPLED PHOTORECEPTOR/ PROTEIN HISTIDINE KINASE/ RED OR FAR-RED LIGHT PHOTORECEPTOR/ SIGNAL TRANSDUCER
AT1G09570	Experimental in vitro	FSW = 0.0092	Class B: unclear nucleus cytosol Class D: cytosol (p = 0.67)	PHYA (PHYTOCHROME A) G-PROTEIN COUPLED PHOTORECEPTOR/ PROTEIN HISTIDINE KINASE/ RED OR FAR-RED LIGHT PHOTORECEPTOR/ SIGNAL TRANSDUCER
AT3G01280	Predicted Affinity Capture-Western two hybrid two hybrid Affinity Capture-Western Co-purification	FSW = 0.0254	Class C: unclear	VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1) VOLTAGE-GATED ANION CHANNEL
AT2G33120	Predicted interologs mapping	FSW = 0.0150	Class C: unclear	SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1)
AT4G32470	Predicted Affinity Capture-MS	FSW = 0.5429	Class C: unclear	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT2G33040	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0123	Class C: unclear	ATP SYNTHASE GAMMA CHAIN MITOCHONDRIAL (ATPC)
AT1G77590	Predicted Affinity Capture-MS	FSW = 0.0140	Class C: unclear	LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9) LONG-CHAIN-FATTY-ACID-COA LIGASE
AT2G29990	Predicted Affinity Capture-MS	FSW = 0.0910	Class C: unclear	NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2) FAD BINDING / NADH DEHYDROGENASE/ OXIDOREDUCTASE
AT4G05020	Predicted Affinity Capture-MS interaction prediction Enriched domain pair Co-expression	FSW = 0.0079	Class C: unclear	NDB2 (NAD(P)H DEHYDROGENASE B2) FAD BINDING / DISULFIDE OXIDOREDUCTASE/ OXIDOREDUCTASE
AT2G19860	Predicted Affinity Capture-MS	FSW = 0.4753	Class C: unclear	HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G08950	Predicted Affinity Capture-MS	FSW = 0.5474	Class C: unclear	ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT3G58500	Predicted Synthetic Lethality Synthetic Rescue Phylogenetic profile method	FSW = 0.0530	Class C: unclear	PP2A-3 (PROTEIN PHOSPHATASE 2A-3) PROTEIN SERINE/THREONINE PHOSPHATASE
AT2G42740	Predicted Affinity Capture-MS	FSW = 0.0075	Unknown	RPL16A STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G20450	Predicted Affinity Capture-MS	FSW = 0.4240	Unknown	60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT3G08710	Predicted Affinity Capture-MS	FSW = 0.1134	Unknown	ATH9 (THIOREDOXIN H-TYPE 9)
AT3G56190	Predicted Affinity Capture-MS	FSW = 0.3778	Unknown	ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN
AT1G22780	Predicted Affinity Capture-MS	FSW = 0.5210	Unknown	PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G62150	Predicted Affinity Capture-MS	FSW = 0.1325	Unknown	PGP21 (P-GLYCOPROTEIN 21) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT1G07930	Predicted Affinity Capture-MS	FSW = 0.5211	Unknown	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT4G14800	Predicted Synthetic Lethality	FSW = 0.0136	Unknown	PBD2 (20S PROTEASOME BETA SUBUNIT 2) PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G30470	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western interologs mapping	FSW = 0.0273	Unknown	SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN
AT3G63130	Predicted interologs mapping	FSW = 0.0056	Unknown	RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1) RAN GTPASE ACTIVATOR/ PROTEIN BINDING
AT1G15210	Predicted Affinity Capture-MS	FSW = 0.5464	Unknown	PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT3G16950	Predicted Affinity Capture-MS	FSW = 0.4973	Unknown	LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT5G65430	Predicted Affinity Capture-MS	FSW = 0.0738	Unknown	GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT5G53460	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0156	Unknown	GLT1 GLUTAMATE SYNTHASE (NADH)
AT5G63890	Predicted interaction prediction	FSW = 0.0069	Unknown	ATHDH (HISTIDINOL DEHYDROGENASE) HISTIDINOL DEHYDROGENASE
AT4G35800	Predicted Synthetic Lethality	FSW = 0.0256	Unknown	NRPB1 (RNA POLYMERASE II LARGE SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT3G44610	Predicted Affinity Capture-MS	FSW = 0.2038	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT5G13050	Predicted Affinity Capture-MS	FSW = 0.4876	Unknown	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
AT3G11630	Predicted Affinity Capture-MS	FSW = 0.2897	Unknown	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT3G06040	Predicted Affinity Capture-MS	FSW = 0.4187	Unknown	RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT5G60390	Predicted Affinity Capture-MS	FSW = 0.3863	Unknown	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G45420	Predicted Affinity Capture-MS	FSW = 0.4234	Unknown	MYB FAMILY TRANSCRIPTION FACTOR
AT5G23740	Predicted Affinity Capture-MS	FSW = 0.4399	Unknown	RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G27970	Predicted Affinity Capture-MS	FSW = 0.4634	Unknown	NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT2G21540	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1378	Unknown	SFH3 (SEC14-LIKE 3) PHOSPHATIDYLINOSITOL TRANSPORTER
AT1G36160	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.0507	Unknown	ACC1 (ACETYL-COENZYME A CARBOXYLASE 1) ACETYL-COA CARBOXYLASE
AT5G62300	Predicted Affinity Capture-MS	FSW = 0.3714	Unknown	40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT1G09840	Predicted interologs mapping	FSW = 0.0064	Unknown	ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41) ATP BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G35020	Predicted Synthetic Lethality	FSW = 0.0079	Unknown	ARAC3 (ARABIDOPSIS RAC-LIKE 3) GTP BINDING / GTPASE
AT4G24400	Predicted Affinity Capture-MS	FSW = 0.2851	Unknown	CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE
AT4G36860	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.5519	Unknown	ZINC ION BINDING
AT2G42500	Predicted interologs mapping Phylogenetic profile method	FSW = 0.0569	Unknown	PP2A-4 HYDROLASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT1G10430	Predicted Phylogenetic profile method	FSW = 0.0482	Unknown	PP2A-2 PROTEIN SERINE/THREONINE PHOSPHATASE
AT5G03300	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0068	Unknown	ADK2 (ADENOSINE KINASE 2) ADENOSINE KINASE/ COPPER ION BINDING / KINASE
AT1G09640	Predicted Affinity Capture-MS	FSW = 0.4344	Unknown	ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE
AT5G02490	Predicted Affinity Capture-MS	FSW = 0.0121	Unknown	HEAT SHOCK COGNATE 70 KDA PROTEIN 2 (HSC70-2) (HSP70-2)
AT5G20890	Predicted Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.0200	Unknown	CHAPERONIN PUTATIVE
AT1G59830	Predicted Phylogenetic profile method	FSW = 0.0523	Unknown	PP2A-1 PROTEIN SERINE/THREONINE PHOSPHATASE
AT1G50310	Predicted Affinity Capture-MS	FSW = 0.2472	Unknown	STP9 (SUGAR TRANSPORTER 9) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G43370	Predicted Affinity Capture-MS	FSW = 0.5176	Unknown	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT4G00520	Predicted Affinity Capture-MS	FSW = 0.0498	Unknown	ACYL-COA THIOESTERASE FAMILY PROTEIN
AT2G35690	Predicted Affinity Capture-MS	FSW = 0.3889	Unknown	ACX5 (ACYL-COA OXIDASE 5) FAD BINDING / ACYL-COA DEHYDROGENASE/ ACYL-COA OXIDASE/ ELECTRON CARRIER/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-CH GROUP OF DONORS
AT5G57015	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0119	Unknown	CKL12 (CASEIN KINASE I-LIKE 12) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G26720	Predicted Phylogenetic profile method Co-expression	FSW = 0.0489	Unknown	PPX1 (PROTEIN PHOSPHATASE X 1) PROTEIN SERINE/THREONINE PHOSPHATASE
AT5G44500	Predicted Affinity Capture-MS	FSW = 0.4719	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT3G50670	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0115	Unknown	U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K) RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT5G59870	Predicted Affinity Capture-MS	FSW = 0.4990	Unknown	HTA6 DNA BINDING
AT2G37470	Predicted Affinity Capture-MS	FSW = 0.4211	Unknown	HISTONE H2B PUTATIVE
AT3G14270	Predicted interaction prediction	FSW = 0.0033	Unknown	PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN
AT1G28490	Predicted biochemical	FSW = 0.0200	Unknown	SYP61 (SYNTAXIN OF PLANTS 61) SNAP RECEPTOR
AT1G72480	Predicted Affinity Capture-MS	FSW = 0.3934	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN GOLGI APPARATUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G010701) HAS 422 BLAST HITS TO 420 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 208 FUNGI - 101 PLANTS - 83 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK)
AT2G13650	Predicted Affinity Capture-MS	FSW = 0.4616	Unknown	GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT4G30990	Predicted Affinity Capture-MS	FSW = 0.3891	Unknown	BINDING
AT5G57625	Predicted Affinity Capture-MS	FSW = 0.1047	Unknown	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT3G05710	Predicted biochemical	FSW = 0.0143	Unknown	SYP43 (SYNTAXIN OF PLANTS 43) SNAP RECEPTOR
AT3G02530	Predicted Affinity Capture-MS interologs mapping interaction prediction	FSW = 0.0329	Unknown	CHAPERONIN PUTATIVE
AT3G08730	Predicted Affinity Capture-MS	FSW = 0.1239	Unknown	PK1 (PROTEIN-SERINE KINASE 1) KINASE/ PROTEIN BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G79750	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0223	Unknown	ATNADP-ME4 (NADP-MALIC ENZYME 4) MALATE DEHYDROGENASE (OXALOACETATE-DECARBOXYLATING) (NADP+)/ MALIC ENZYME/ OXIDOREDUCTASE ACTING ON NADH OR NADPH NAD OR NADP AS ACCEPTOR
AT3G52580	Predicted Affinity Capture-MS	FSW = 0.5305	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT5G10330	Predicted Affinity Capture-MS	FSW = 0.0039	Unknown	HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1) HISTIDINOL-PHOSPHATE TRANSAMINASE
AT5G41480	Predicted Affinity Capture-MS	FSW = 0.4659	Unknown	GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE
AT3G12530	Predicted Affinity Capture-MS	FSW = 0.4041	Unknown	PSF2
AT5G47880	Predicted Affinity Capture-MS	FSW = 0.4425	Unknown	ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT3G22880	Predicted Affinity Capture-MS	FSW = 0.1000	Unknown	DMC1 (DISRUPTION OF MEIOTIC CONTROL 1) ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT1G69960	Predicted Phylogenetic profile method	FSW = 0.0871	Unknown	PP2A (SERINE/THREONINE PROTEIN PHOSPHATASE 2A) PROTEIN SERINE/THREONINE PHOSPHATASE
AT4G17620	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0036	Unknown	GLYCINE-RICH PROTEIN
AT2G24040	Predicted Affinity Capture-MS	FSW = 0.5527	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT4G21710	Predicted Synthetic Lethality	FSW = 0.0178	Unknown	NRPB2 DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT1G13870	Predicted co-fractionation Co-fractionation	FSW = 0.0349	Unknown	DRL1 (DEFORMED ROOTS AND LEAVES 1) CALMODULIN BINDING / PURINE NUCLEOTIDE BINDING
AT1G24706	Predicted Affinity Capture-MS	FSW = 0.2299	Unknown	UNKNOWN PROTEIN
AT1G33110	Predicted Affinity Capture-MS	FSW = 0.4030	Unknown	MATE EFFLUX FAMILY PROTEIN
AT1G51770	Predicted Affinity Capture-MS	FSW = 0.5828	Unknown	UNKNOWN PROTEIN
AT1G59730	Predicted Affinity Capture-MS	FSW = 0.1255	Unknown	ATH7 (THIOREDOXIN H-TYPE 7)
AT1G62880	Predicted Affinity Capture-MS	FSW = 0.5303	Unknown	CORNICHON FAMILY PROTEIN
AT1G64480	Predicted Affinity Capture-MS	FSW = 0.5178	Unknown	CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING
AT1G71280	Predicted Affinity Capture-MS	FSW = 0.4744	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT2G02760	Predicted Synthetic Lethality	FSW = 0.0283	Unknown	ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) UBIQUITIN-PROTEIN LIGASE
AT2G03667	Predicted Affinity Capture-MS	FSW = 0.3634	Unknown	ASPARAGINE SYNTHASE (GLUTAMINE-HYDROLYZING)
AT2G19910	Predicted Affinity Capture-MS	FSW = 0.2523	Unknown	RNA-DEPENDENT RNA POLYMERASE FAMILY PROTEIN
AT2G20560	Predicted interologs mapping	FSW = 0.0066	Unknown	DNAJ HEAT SHOCK FAMILY PROTEIN
AT2G21250	Predicted Affinity Capture-MS	FSW = 0.2963	Unknown	MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE
AT2G28360	Predicted interaction prediction Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western interologs mapping	FSW = 0.0200	Unknown	INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SIT4 PHOSPHATASE-ASSOCIATED PROTEIN (INTERPROIPR007587) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN (TAIRAT1G079901) HAS 1431 BLAST HITS TO 1107 PROTEINS IN 182 SPECIES ARCHAE - 2 BACTERIA - 108 METAZOA - 552 FUNGI - 305 PLANTS - 89 VIRUSES - 18 OTHER EUKARYOTES - 357 (SOURCE NCBI BLINK)
AT2G29390	Predicted Affinity Capture-MS	FSW = 0.3414	Unknown	SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE
AT2G35390	Predicted Affinity Capture-MS	FSW = 0.1371	Unknown	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 1 (PRSI)
AT2G42160	Predicted Affinity Capture-MS	FSW = 0.1752	Unknown	ZINC FINGER (UBIQUITIN-HYDROLASE) DOMAIN-CONTAINING PROTEIN
AT2G43360	Predicted Affinity Capture-MS	FSW = 0.1746	Unknown	BIO2 (BIOTIN AUXOTROPH 2) BIOTIN SYNTHASE
AT2G46860	Predicted Affinity Capture-MS	FSW = 0.5226	Unknown	ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT3G03960	Predicted interologs mapping	FSW = 0.0338	Unknown	CHAPERONIN PUTATIVE
AT3G05960	Predicted Affinity Capture-MS	FSW = 0.3505	Unknown	STP6 (SUGAR TRANSPORTER 6) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G19940	Predicted Affinity Capture-MS	FSW = 0.4385	Unknown	SUGAR TRANSPORTER PUTATIVE
AT1G05650	Predicted Affinity Capture-MS	FSW = 0.2494	Unknown	POLYGALACTURONASE PUTATIVE / PECTINASE PUTATIVE
AT1G11530	Predicted Affinity Capture-MS	FSW = 0.4241	Unknown	ATCXXS1 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1) PROTEIN DISULFIDE ISOMERASE
AT1G20696	Predicted Affinity Capture-MS	FSW = 0.4170	Unknown	HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G20920	Predicted Affinity Capture-MS	FSW = 0.3056	Unknown	DEAD BOX RNA HELICASE PUTATIVE
AT1G50030	Predicted Co-purification	FSW = 0.0217	Unknown	TOR (TARGET OF RAPAMYCIN) 1-PHOSPHATIDYLINOSITOL-3-KINASE/ PROTEIN BINDING
AT1G54140	Predicted Synthetic Lethality	FSW = 0.0125	Unknown	TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT1G55730	Predicted Affinity Capture-MS	FSW = 0.3259	Unknown	ATCAX5 CALCIUMCATION ANTIPORTER/ CATIONCATION ANTIPORTER
AT1G76720	Predicted Affinity Capture-MS	FSW = 0.4963	Unknown	GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT2G16740	Predicted Affinity Capture-MS	FSW = 0.1378	Unknown	UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE
AT2G41530	Predicted Affinity Capture-MS	FSW = 0.2274	Unknown	SFGH (S-FORMYLGLUTATHIONE HYDROLASE) S-FORMYLGLUTATHIONE HYDROLASE/ HYDROLASE ACTING ON ESTER BONDS
AT3G01090	Predicted Synthetic Rescue	FSW = 0.0233	Unknown	AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) PROTEIN BINDING / PROTEIN KINASE
AT3G05540	Predicted Affinity Capture-MS	FSW = 0.1642	Unknown	INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CYTOPLASM CONTAINS INTERPRO DOMAIN/S TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN (INTERPROIPR018105) TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR001983) MSS4/TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR011323) TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN CONSERVED SITE (INTERPROIPR018103) MSS4-LIKE (INTERPROIPR011057) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) (TAIRAT3G166401) HAS 640 BLAST HITS TO 640 PROTEINS IN 231 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 343 FUNGI - 110 PLANTS - 105 VIRUSES - 0 OTHER EUKARYOTES - 82 (SOURCE NCBI BLINK)
AT3G12690	Predicted Affinity Capture-MS	FSW = 0.5623	Unknown	AGC15 (AGC KINASE 15) KINASE
AT3G20650	Predicted Affinity Capture-MS	FSW = 0.3834	Unknown	MRNA CAPPING ENZYME FAMILY PROTEIN
AT3G23570	Predicted Affinity Capture-MS	FSW = 0.3574	Unknown	DIENELACTONE HYDROLASE FAMILY PROTEIN
AT3G30842	Predicted Affinity Capture-MS	FSW = 0.4068	Unknown	PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G52390	Predicted Affinity Capture-MS	FSW = 0.4767	Unknown	TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT3G56440	Predicted Affinity Capture-MS	FSW = 0.0193	Unknown	ATATG18D
AT4G17770	Predicted Affinity Capture-MS	FSW = 0.5183	Unknown	ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT4G18460	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0142	Unknown	D-TYR-TRNA(TYR) DEACYLASE FAMILY PROTEIN
AT4G35620	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Co-purification	FSW = 0.1135	Unknown	CYCB22 (CYCLIN B22) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT5G09390	Predicted Affinity Capture-MS	FSW = 0.3051	Unknown	CD2-BINDING PROTEIN-RELATED
AT5G10270	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0337	Unknown	CDKC1 (CYCLIN-DEPENDENT KINASE C1) KINASE
AT5G13680	Predicted Affinity Capture-Western co-fractionation Co-fractionation	FSW = 0.0425	Unknown	ABO1 (ABA-OVERLY SENSITIVE 1) TRANSCRIPTION ELONGATION REGULATOR
AT5G19660	Predicted Affinity Capture-MS	FSW = 0.4560	Unknown	S1P (SITE-1 PROTEASE) ENDOPEPTIDASE/ SERINE-TYPE ENDOPEPTIDASE
AT5G46150	Predicted Affinity Capture-MS	FSW = 0.1652	Unknown	LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT5G53000	Predicted Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Reconstituted Complex Co-purification Affinity Capture-MS interologs mapping interaction prediction	FSW = 0.1011	Unknown	TAP46 (2A PHOSPHATASE ASSOCIATED PROTEIN OF 46 KD) PROTEIN PHOSPHATASE TYPE 2A REGULATOR
AT3G27000	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0107	Unknown	ARP2 (ACTIN RELATED PROTEIN 2) PROTEIN BINDING / STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT3G27060	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0034	Unknown	TSO2 (TSO MEANING UGLY IN CHINESE) OXIDOREDUCTASE/ RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE/ TRANSITION METAL ION BINDING
AT3G62770	Predicted Affinity Capture-MS	FSW = 0.3637	Unknown	ATATG18A
AT4G08960	Predicted Affinity Capture-Western Affinity Capture-Western	FSW = 0.0290	Unknown	PHOSPHOTYROSYL PHOSPHATASE ACTIVATOR (PTPA) FAMILY PROTEIN
AT4G21800	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0376	Unknown	QQT2 (QUATRE-QUART2) ATP BINDING / NUCLEOTIDE BINDING
AT4G25860	Predicted Affinity Capture-MS	FSW = 0.4167	Unknown	ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING
AT4G26230	Predicted Affinity Capture-MS	FSW = 0.2911	Unknown	60S RIBOSOMAL PROTEIN L31 (RPL31B)
AT4G33240	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0107	Unknown	1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE/ ATP BINDING / PHOSPHATIDYLINOSITOL PHOSPHATE KINASE/ PROTEIN BINDING / ZINC ION BINDING
AT4G39330	Predicted Affinity Capture-MS	FSW = 0.4634	Unknown	CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT5G09630	Predicted Affinity Capture-MS	FSW = 0.4226	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT5G10390	Predicted interologs mapping	FSW = 0.0198	Unknown	HISTONE H3
AT5G10400	Predicted interologs mapping	FSW = 0.0176	Unknown	HISTONE H3
AT5G19820	Predicted Affinity Capture-MS	FSW = 0.4075	Unknown	EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G23395	Predicted Affinity Capture-MS	FSW = 0.0068	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CHLOROPLAST CONTAINS INTERPRO DOMAIN/S CHCH (INTERPROIPR010625) HAS 224 BLAST HITS TO 224 PROTEINS IN 106 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 109 FUNGI - 94 PLANTS - 20 VIRUSES - 0 OTHER EUKARYOTES - 1 (SOURCE NCBI BLINK)
AT5G35980	Predicted interologs mapping	FSW = 0.0096	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT5G41190	Predicted Affinity Capture-MS	FSW = 0.4388	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G43010	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0221	Unknown	RPT4A ATPASE
AT5G54200	Predicted Affinity Capture-MS	FSW = 0.2428	Unknown	WD-40 REPEAT FAMILY PROTEIN
AT5G57330	Predicted Affinity Capture-MS	FSW = 0.0789	Unknown	ALDOSE 1-EPIMERASE FAMILY PROTEIN
AT5G65860	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0121	Unknown	ANKYRIN REPEAT FAMILY PROTEIN
AT4G30510	Predicted interaction prediction	FSW = 0.0213	Unknown	ATATG18B
AT2G39640	Predicted interaction prediction	FSW = 0.0114	Unknown	GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT1G50370	Predicted Gene fusion method Phylogenetic profile method Co-expression	FSW = 0.2813	Unknown	SERINE/THREONINE PROTEIN PHOSPHATASE PUTATIVE
AT5G55260	Predicted Phylogenetic profile method Co-expression	FSW = 0.0610	Unknown	PPX2 (PROTEIN PHOSPHATASE X 2) PROTEIN SERINE/THREONINE PHOSPHATASE

Downloads

Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

AtPIN will be upgraded. Please send your suggestions here

AT3G19980 - ( ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) protein binding / protein serine/threonine kinase/ protein serine/threonine phosphatase )

Class B:

Class D:

Class B:

Class D:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Class C:

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown