AtPIN will be upgraded. Please send your suggestions here

AT2G35390 - ( ribose-phosphate pyrophosphokinase 1 / phosphoribosyl diphosphate synthetase 1 (PRSI) )

162 Proteins interacs with AT2G35390

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT4G32470	Predicted Affinity Capture-MS	FSW = 0.1792	Unknown	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT4G16660	Predicted Affinity Capture-MS	FSW = 0.0366	Unknown	HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT1G61000	Predicted interaction prediction	FSW = 0.0072	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN MITOSIS LOCATED IN PLASMA MEMBRANE EXPRESSED IN CULTURED CELL CONTAINS INTERPRO DOMAIN/S KINETOCHORE PROTEIN NUF2 (INTERPROIPR005549) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS MYOSIN HEAVY CHAIN-RELATED (TAIRAT1G643301) HAS 41010 BLAST HITS TO 23184 PROTEINS IN 1264 SPECIES ARCHAE - 616 BACTERIA - 3998 METAZOA - 20566 FUNGI - 2893 PLANTS - 1316 VIRUSES - 149 OTHER EUKARYOTES - 11472 (SOURCE NCBI BLINK)
AT3G12580	Predicted Affinity Capture-MS	FSW = 0.0381	Unknown	HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING
AT2G20450	Predicted Affinity Capture-MS	FSW = 0.1410	Unknown	60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT1G22780	Predicted Affinity Capture-MS	FSW = 0.1659	Unknown	PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G36750	Predicted Affinity Capture-MS	FSW = 0.0210	Unknown	QUINONE REDUCTASE FAMILY PROTEIN
AT2G34480	Predicted two hybrid	FSW = 0.0151	Unknown	60S RIBOSOMAL PROTEIN L18A (RPL18AB)
AT3G28710	Predicted Affinity Capture-MS	FSW = 0.0260	Unknown	H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT3G62870	Predicted synthetic growth defect	FSW = 0.0853	Unknown	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT5G13450	Predicted Affinity Capture-MS	FSW = 0.0277	Unknown	ATP SYNTHASE DELTA CHAIN MITOCHONDRIAL PUTATIVE / H(+)-TRANSPORTING TWO-SECTOR ATPASE DELTA (OSCP) SUBUNIT PUTATIVE
AT3G08950	Predicted Affinity Capture-MS	FSW = 0.1679	Unknown	ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT2G19860	Predicted Affinity Capture-MS	FSW = 0.1831	Unknown	HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G59280	Predicted Affinity Capture-MS	FSW = 0.0098	Unknown	TXR1 (THAXTOMIN A RESISTANT 1)
AT3G19980	Predicted Affinity Capture-MS	FSW = 0.1371	Unknown	ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT1G07890	Predicted Affinity Capture-MS	FSW = 0.0477	Unknown	APX1 (ASCORBATE PEROXIDASE 1) L-ASCORBATE PEROXIDASE
AT1G65240	Predicted Affinity Capture-MS	FSW = 0.0471	Unknown	ASPARTYL PROTEASE FAMILY PROTEIN
AT3G20550	Predicted Colocalization	FSW = 0.0266	Unknown	DDL (DAWDLE)
AT3G16950	Predicted Affinity Capture-MS	FSW = 0.2201	Unknown	LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT4G26970	Predicted Affinity Capture-MS	FSW = 0.0781	Unknown	ACONITATE HYDRATASE/ COPPER ION BINDING
AT2G25140	Predicted Affinity Capture-MS	FSW = 0.0299	Unknown	CLPB4 (CASEIN LYTIC PROTEINASE B4) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT5G58470	Predicted two hybrid	FSW = 0.0051	Unknown	TAF15B (TBP-ASSOCIATED FACTOR 15B) BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING
AT1G64190	Predicted Affinity Capture-MS	FSW = 0.0089	Unknown	6-PHOSPHOGLUCONATE DEHYDROGENASE FAMILY PROTEIN
AT3G11630	Predicted Affinity Capture-MS	FSW = 0.1388	Unknown	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT1G51040	Predicted Affinity Capture-MS	FSW = 0.1385	Unknown	PHOSPHATIDYLINOSITOL 4-KINASE PUTATIVE
AT5G46110	Predicted two hybrid	FSW = 0.0499	Unknown	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2) ANTIPORTER/ TRIOSE-PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT1G80190	Predicted Affinity Capture-MS	FSW = 0.0262	Unknown	PSF1 (PARTNER OF SLD FIVE 1)
AT1G18870	Predicted Affinity Capture-MS	FSW = 0.0114	Unknown	ICS2 (ISOCHORISMATE SYNTHASE 2) ISOCHORISMATE SYNTHASE
AT1G71860	Predicted Colocalization	FSW = 0.0194	Unknown	PTP1 (PROTEIN TYROSINE PHOSPHATASE 1) PROTEIN TYROSINE PHOSPHATASE
AT3G48930	Predicted biochemical	FSW = 0.0158	Unknown	EMB1080 (EMBRYO DEFECTIVE 1080) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G17390	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0535	Unknown	MTO3 (METHIONINE OVER-ACCUMULATOR 3) METHIONINE ADENOSYLTRANSFERASE
AT2G14120	Predicted Affinity Capture-MS	FSW = 0.0913	Unknown	DYNAMIN-LIKE PROTEIN 2B (ADL2B)
AT4G28950	Predicted Affinity Capture-MS	FSW = 0.1089	Unknown	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9) GTP BINDING
AT3G09740	Predicted two hybrid	FSW = 0.0243	Unknown	SYP71 (SYNTAXIN OF PLANTS 71) PROTEIN TRANSPORTER
AT4G36490	Predicted Affinity Capture-MS	FSW = 0.0354	Unknown	SFH12 (SEC14-LIKE 12) PHOSPHATIDYLINOSITOL TRANSPORTER/ TRANSPORTER
AT5G52640	Predicted synthetic growth defect	FSW = 0.0069	Unknown	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT5G08570	Predicted Affinity Capture-MS	FSW = 0.0268	Unknown	PYRUVATE KINASE PUTATIVE
AT5G62300	Predicted Affinity Capture-MS	FSW = 0.1628	Unknown	40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT1G63110	Predicted Affinity Capture-MS	FSW = 0.0436	Unknown	CELL DIVISION CYCLE PROTEIN-RELATED
AT5G26340	Predicted Affinity Capture-MS	FSW = 0.0246	Unknown	MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT4G24400	Predicted Affinity Capture-MS	FSW = 0.1670	Unknown	CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE
AT1G79920	Predicted two hybrid	FSW = 0.0165	Unknown	ATP BINDING
AT4G36860	Predicted Affinity Capture-MS	FSW = 0.2159	Unknown	ZINC ION BINDING
AT3G53870	Predicted biochemical	FSW = 0.0133	Unknown	40S RIBOSOMAL PROTEIN S3 (RPS3B)
AT5G02490	Predicted Affinity Capture-MS	FSW = 0.0265	Unknown	HEAT SHOCK COGNATE 70 KDA PROTEIN 2 (HSC70-2) (HSP70-2)
AT1G07180	Predicted Affinity Capture-MS	FSW = 0.0265	Unknown	NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1) NADH DEHYDROGENASE
AT5G59950	Predicted Affinity Capture-MS	FSW = 0.0449	Unknown	RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE
AT2G41790	Predicted Affinity Capture-MS	FSW = 0.0313	Unknown	PEPTIDASE M16 FAMILY PROTEIN / INSULINASE FAMILY PROTEIN
AT1G21700	Predicted interologs mapping	FSW = 0.0162	Unknown	ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING
AT4G34430	Predicted Affinity Capture-MS	FSW = 0.0721	Unknown	CHB3 DNA BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT1G79020	Predicted Affinity Capture-MS	FSW = 0.0422	Unknown	TRANSCRIPTION FACTOR-RELATED
AT3G21540	Predicted Affinity Capture-MS	FSW = 0.0059	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT5G06550	Predicted two hybrid	FSW = 0.0227	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN CELL SURFACE RECEPTOR LINKED SIGNAL TRANSDUCTION EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 12 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CYCLIN-LIKE F-BOX (INTERPROIPR001810) TRANSCRIPTION FACTOR JUMONJI/ASPARTYL BETA-HYDROXYLASE (INTERPROIPR003347) TRANSCRIPTION FACTOR JUMONJI (INTERPROIPR013129) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TRANSFERASE TRANSFERRING GLYCOSYL GROUPS (TAIRAT1G782801) HAS 1299 BLAST HITS TO 1289 PROTEINS IN 204 SPECIES ARCHAE - 0 BACTERIA - 195 METAZOA - 777 FUNGI - 106 PLANTS - 94 VIRUSES - 0 OTHER EUKARYOTES - 127 (SOURCE NCBI BLINK)
AT1G76300	Predicted Affinity Capture-MS	FSW = 0.0281	Unknown	SMD3 (SNRNP CORE PROTEIN SMD3)
AT5G54840	Predicted two hybrid	FSW = 0.0198	Unknown	SGP1 GTP BINDING
AT5G27720	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0366	Unknown	EMB1644 (EMBRYO DEFECTIVE 1644)
AT2G40290	Predicted interologs mapping	FSW = 0.0229	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 PUTATIVE / EIF-2A PUTATIVE / EIF-2-ALPHA PUTATIVE
AT1G09060	Predicted Affinity Capture-MS	FSW = 0.0238	Unknown	TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN-CONTAINING PROTEIN
AT4G25340	Predicted Affinity Capture-MS	FSW = 0.0382	Unknown	IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT2G41380	Predicted Affinity Capture-MS	FSW = 0.0381	Unknown	EMBRYO-ABUNDANT PROTEIN-RELATED
AT1G72330	Predicted Affinity Capture-MS	FSW = 0.0312	Unknown	ALAAT2 (ALANINE AMINOTRANSFERASE 2) ATP BINDING / L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE
AT3G20970	Predicted two hybrid Synthetic Lethality	FSW = 0.0923	Unknown	NFU4 STRUCTURAL MOLECULE
AT4G04870	Predicted Affinity Capture-MS	FSW = 0.0554	Unknown	CLS (CARDIOLIPIN SYNTHASE) CARDIOLIPIN SYNTHASE/ PHOSPHATIDYLTRANSFERASE
AT2G18450	Predicted Affinity Capture-MS	FSW = 0.0741	Unknown	SDH1-2 SUCCINATE DEHYDROGENASE
AT5G35160	Predicted two hybrid	FSW = 0.0192	Unknown	LOCATED IN INTEGRAL TO MEMBRANE GOLGI APPARATUS EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NONASPANIN (TM9SF) (INTERPROIPR004240) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT4G126501) HAS 1053 BLAST HITS TO 1004 PROTEINS IN 163 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 478 FUNGI - 143 PLANTS - 250 VIRUSES - 0 OTHER EUKARYOTES - 182 (SOURCE NCBI BLINK)
AT2G13650	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2445	Unknown	GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT4G25780	Predicted Affinity Capture-MS	FSW = 0.0755	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT1G76400	Predicted Affinity Capture-MS	FSW = 0.0195	Unknown	RIBOPHORIN I FAMILY PROTEIN
AT4G01510	Predicted Affinity Capture-MS	FSW = 0.0064	Unknown	ARV2
AT2G38960	Predicted biochemical	FSW = 0.0457	Unknown	AERO2 (ARABIDOPSIS ENDOPLASMIC RETICULUM OXIDOREDUCTINS 2) FAD BINDING / ELECTRON CARRIER/ OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR / PROTEIN BINDING
AT5G47720	Predicted Affinity Capture-MS	FSW = 0.0706	Unknown	ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE
AT3G16050	Predicted Affinity Capture-MS	FSW = 0.1049	Unknown	A37 PROTEIN HETERODIMERIZATION
AT2G17800	Predicted two hybrid Affinity Capture-MS	FSW = 0.0211	Unknown	ARAC1 GTP BINDING
AT3G52580	Predicted Affinity Capture-MS	FSW = 0.1861	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT5G41480	Predicted Affinity Capture-MS	FSW = 0.1780	Unknown	GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE
AT2G24040	Predicted Affinity Capture-MS	FSW = 0.2152	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT4G39100	Predicted interologs mapping	FSW = 0.0145	Unknown	SHL1 (SHORT LIFE) TRANSCRIPTION FACTOR/ ZINC-MEDIATED TRANSCRIPTIONAL ACTIVATOR
AT2G18230	Predicted Affinity Capture-MS	FSW = 0.0127	Unknown	ATPPA2 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 2) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT1G15440	Predicted two hybrid two hybrid Affinity Capture-MS two hybrid Protein-peptide Affinity Capture-Western	FSW = 0.0484	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G24706	Predicted Affinity Capture-MS	FSW = 0.1128	Unknown	UNKNOWN PROTEIN
AT1G25260	Predicted Affinity Capture-MS	FSW = 0.0214	Unknown	ACIDIC RIBOSOMAL PROTEIN P0-RELATED
AT1G26140	Predicted Affinity Capture-MS	FSW = 0.0624	Unknown	UNKNOWN PROTEIN
AT1G27840	Predicted Affinity Capture-MS	FSW = 0.0167	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G31170	Predicted Affinity Capture-MS	FSW = 0.0887	Unknown	SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS
AT1G48605	Predicted Affinity Capture-MS Affinity Capture-MS Reconstituted Complex two hybrid Synthetic Lethality Affinity Capture-Western interologs mapping	FSW = 0.0554	Unknown	ATHAL3B FMN BINDING / ELECTRON CARRIER/ PHOSPHOPANTOTHENOYLCYSTEINE DECARBOXYLASE
AT1G51770	Predicted Affinity Capture-MS	FSW = 0.2136	Unknown	UNKNOWN PROTEIN
AT1G62880	Predicted Affinity Capture-MS	FSW = 0.1861	Unknown	CORNICHON FAMILY PROTEIN
AT1G64480	Predicted Affinity Capture-MS	FSW = 0.1930	Unknown	CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING
AT1G71280	Predicted Affinity Capture-MS	FSW = 0.1619	Unknown	DEAD/DEAH BOX HELICASE PUTATIVE
AT2G20635	Predicted Affinity Capture-Western Affinity Capture-Western Reconstituted Complex two hybrid	FSW = 0.0459	Unknown	ATP BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G03530	Predicted Affinity Capture-MS	FSW = 0.0128	Unknown	NAF1 (NUCLEAR ASSEMBLY FACTOR 1)
AT1G10940	Predicted Synthetic Lethality	FSW = 0.0057	Unknown	SNRK24 (SNF1-RELATED PROTEIN KINASE 24) KINASE
AT1G11530	Predicted Affinity Capture-MS	FSW = 0.1963	Unknown	ATCXXS1 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1) PROTEIN DISULFIDE ISOMERASE
AT1G11660	Predicted Affinity Capture-MS	FSW = 0.0312	Unknown	HEAT SHOCK PROTEIN PUTATIVE
AT1G20920	Predicted Affinity Capture-MS	FSW = 0.1220	Unknown	DEAD BOX RNA HELICASE PUTATIVE
AT1G25510	Predicted Affinity Capture-MS	FSW = 0.0185	Unknown	ASPARTYL PROTEASE FAMILY PROTEIN
AT1G33090	Predicted Affinity Capture-Western Affinity Capture-Western	FSW = 0.0732	Unknown	MATE EFFLUX FAMILY PROTEIN
AT1G34580	Predicted two hybrid	FSW = 0.1551	Unknown	MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G43080	Predicted interologs mapping	FSW = 0.0120	Unknown	GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN
AT1G43860	Predicted Affinity Capture-MS	FSW = 0.0160	Unknown	TRANSCRIPTION FACTOR
AT1G55300	Predicted Affinity Capture-MS	FSW = 0.0339	Unknown	TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G55730	Predicted Affinity Capture-MS	FSW = 0.1149	Unknown	ATCAX5 CALCIUMCATION ANTIPORTER/ CATIONCATION ANTIPORTER
AT1G58520	Predicted Affinity Capture-MS	FSW = 0.0567	Unknown	HYDROLASE ACTING ON ESTER BONDS / LIPASE
AT1G62850	Predicted Affinity Capture-MS	FSW = 0.0051	Unknown	TRANSLATION RELEASE FACTOR
AT1G63660	Predicted Affinity Capture-MS	FSW = 0.0607	Unknown	GMP SYNTHASE (GLUTAMINE-HYDROLYZING) PUTATIVE / GLUTAMINE AMIDOTRANSFERASE PUTATIVE
AT1G66240	Predicted Affinity Capture-MS	FSW = 0.0384	Unknown	ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1) METAL ION BINDING
AT1G76720	Predicted Affinity Capture-MS	FSW = 0.1991	Unknown	GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT2G01830	Predicted Affinity Capture-MS	FSW = 0.0214	Unknown	WOL (WOODEN LEG) CYTOKININ RECEPTOR/ OSMOSENSOR/ PHOSPHOPROTEIN PHOSPHATASE/ PROTEIN HISTIDINE KINASE
AT2G28720	Predicted Affinity Capture-MS two hybrid	FSW = 0.0306	Unknown	HISTONE H2B PUTATIVE
AT2G29390	Predicted Affinity Capture-MS	FSW = 0.1371	Unknown	SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE
AT2G31020	Predicted Affinity Capture-MS	FSW = 0.0726	Unknown	ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A) OXYSTEROL BINDING
AT2G36060	Predicted Affinity Capture-MS	FSW = 0.0401	Unknown	UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN
AT2G46710	Predicted Affinity Capture-Western Affinity Capture-Western Reconstituted Complex Reconstituted Complex two hybrid	FSW = 0.0492	Unknown	RAC GTPASE ACTIVATING PROTEIN PUTATIVE
AT2G46860	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.2049	Unknown	ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT2G47090	Predicted interologs mapping Synthetic Lethality	FSW = 0.0326	Unknown	NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT3G06470	Predicted biochemical	FSW = 0.0255	Unknown	GNS1/SUR4 MEMBRANE FAMILY PROTEIN
AT3G11230	Predicted Affinity Capture-MS	FSW = 0.0396	Unknown	YIPPEE FAMILY PROTEIN
AT3G12670	Predicted interologs mapping	FSW = 0.0149	Unknown	EMB2742 (EMBRYO DEFECTIVE 2742) CTP SYNTHASE/ CATALYTIC
AT3G12690	Predicted Affinity Capture-MS	FSW = 0.1918	Unknown	AGC15 (AGC KINASE 15) KINASE
AT3G15460	Predicted two hybrid	FSW = 0.0150	Unknown	BRIX DOMAIN-CONTAINING PROTEIN
AT3G16565	Predicted Affinity Capture-MS	FSW = 0.0174	Unknown	ATP BINDING / ALANINE-TRNA LIGASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT3G24010	Predicted interologs mapping	FSW = 0.0657	Unknown	ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT3G47290	Predicted Affinity Capture-MS	FSW = 0.0089	Unknown	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
AT3G49420	Predicted interologs mapping interologs mapping interologs mapping interologs mapping	FSW = 0.0427	Unknown	GOT1-LIKE FAMILY PROTEIN
AT3G53030	Predicted interologs mapping interologs mapping	FSW = 0.0460	Unknown	SRPK4 (SER/ARG-RICH PROTEIN KINASE 4) KINASE/ PROTEIN KINASE
AT3G53730	Predicted Affinity Capture-MS	FSW = 0.0463	Unknown	HISTONE H4
AT3G59845	Predicted Affinity Capture-MS Synthetic Lethality Affinity Capture-MS	FSW = 0.0538	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT3G61740	Predicted Affinity Capture-MS	FSW = 0.0464	Unknown	SDG14 (SET DOMAIN PROTEIN 14) DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G14670	Predicted Affinity Capture-MS	FSW = 0.0551	Unknown	CLPB2 ATP BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT4G19880	Predicted Affinity Capture-MS	FSW = 0.0238	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RESPONSE TO CADMIUM ION LOCATED IN CHLOROPLAST EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S GLUTATHIONE S-TRANSFERASE PREDICTED (INTERPROIPR016639) GLUTATHIONE S-TRANSFERASE C-TERMINAL (INTERPROIPR004046) GLUTATHIONE S-TRANSFERASE C-TERMINAL-LIKE (INTERPROIPR010987) GLUTATHIONE S-TRANSFERASE/CHLORIDE CHANNEL C-TERMINAL (INTERPROIPR017933) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G450201) HAS 1635 BLAST HITS TO 1635 PROTEINS IN 489 SPECIES ARCHAE - 12 BACTERIA - 905 METAZOA - 23 FUNGI - 158 PLANTS - 57 VIRUSES - 0 OTHER EUKARYOTES - 480 (SOURCE NCBI BLINK)
AT4G27130	Predicted Synthetic Lethality	FSW = 0.0631	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G36630	Predicted Affinity Capture-MS	FSW = 0.0294	Unknown	EMB2754 (EMBRYO DEFECTIVE 2754) BINDING / SMALL GTPASE REGULATOR
AT5G06150	Predicted interologs mapping two hybrid Colocalization biochemical Reconstituted Complex Affinity Capture-MS Affinity Capture-Western	FSW = 0.0758	Unknown	CYC1BAT CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT5G13400	Predicted Affinity Capture-MS	FSW = 0.0127	Unknown	PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN
AT5G14050	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0285	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT5G16960	Predicted Affinity Capture-MS	FSW = 0.0170	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G54800	Predicted interologs mapping	FSW = 0.0412	Unknown	GPT1 ANTIPORTER/ GLUCOSE-6-PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT5G64760	Predicted Affinity Capture-MS	FSW = 0.0260	Unknown	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)
AT2G44820	Predicted Affinity Capture-MS	FSW = 0.0243	Unknown	UNKNOWN PROTEIN
AT2G46070	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0266	Unknown	MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12) MAP KINASE/ KINASE
AT3G05540	Predicted Affinity Capture-MS	FSW = 0.1036	Unknown	INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CYTOPLASM CONTAINS INTERPRO DOMAIN/S TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN (INTERPROIPR018105) TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR001983) MSS4/TRANSLATIONALLY CONTROLLED TUMOUR-ASSOCIATED TCTP (INTERPROIPR011323) TRANSLATIONALLY CONTROLLED TUMOUR PROTEIN CONSERVED SITE (INTERPROIPR018103) MSS4-LIKE (INTERPROIPR011057) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN) (TAIRAT3G166401) HAS 640 BLAST HITS TO 640 PROTEINS IN 231 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 343 FUNGI - 110 PLANTS - 105 VIRUSES - 0 OTHER EUKARYOTES - 82 (SOURCE NCBI BLINK)
AT3G44590	Predicted two hybrid	FSW = 0.0329	Unknown	60S ACIDIC RIBOSOMAL PROTEIN P2 (RPP2D)
AT3G55020	Predicted Affinity Capture-MS	FSW = 0.0925	Unknown	RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT3G62770	Predicted two hybrid Affinity Capture-MS	FSW = 0.2061	Unknown	ATATG18A
AT4G16265	Predicted two hybrid	FSW = 0.0180	Unknown	NRPB9B DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ NUCLEIC ACID BINDING / TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT4G25860	Predicted Affinity Capture-MS	FSW = 0.1982	Unknown	ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING
AT4G26230	Predicted Affinity Capture-MS two hybrid	FSW = 0.1317	Unknown	60S RIBOSOMAL PROTEIN L31 (RPL31B)
AT4G32350	Predicted two hybrid	FSW = 0.0578	Unknown	UNKNOWN PROTEIN
AT4G37680	Predicted Affinity Capture-MS	FSW = 0.0449	Unknown	HHP4 (HEPTAHELICAL PROTEIN 4) RECEPTOR
AT4G39330	Predicted Affinity Capture-MS	FSW = 0.1899	Unknown	CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT5G16040	Predicted Affinity Capture-Western	FSW = 0.0317	Unknown	REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT5G19820	Predicted Affinity Capture-MS	FSW = 0.1827	Unknown	EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G49970	Predicted two hybrid	FSW = 0.0799	Unknown	ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE
AT5G53120	Predicted two hybrid	FSW = 0.0121	Unknown	SPDS3 (SPERMIDINE SYNTHASE 3) SPERMIDINE SYNTHASE/ SPERMINE SYNTHASE
AT5G57330	Predicted Affinity Capture-MS	FSW = 0.0963	Unknown	ALDOSE 1-EPIMERASE FAMILY PROTEIN
AT5G57890	Predicted Affinity Capture-MS	FSW = 0.0956	Unknown	ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT3G02910	Predicted two hybrid	FSW = 0.0063	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S BUTIROSIN BIOSYNTHESIS BTRG-LIKE (INTERPROIPR013024) AIG2-LIKE (INTERPROIPR009288) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G467201) HAS 210 BLAST HITS TO 210 PROTEINS IN 66 SPECIES ARCHAE - 2 BACTERIA - 27 METAZOA - 122 FUNGI - 0 PLANTS - 41 VIRUSES - 0 OTHER EUKARYOTES - 18 (SOURCE NCBI BLINK)
AT2G05220	Predicted two hybrid	FSW = 0.0108	Unknown	40S RIBOSOMAL PROTEIN S17 (RPS17B)
AT4G00720	Predicted interaction prediction	FSW = 0.0040	Unknown	ATSK32 (SHAGGY-LIKE PROTEIN KINASE 32) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT2G44530	Predicted Gene neighbors method Phylogenetic profile method	FSW = 0.0294	Unknown	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE PUTATIVE / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE PUTATIVE
AT1G32380	Predicted Phylogenetic profile method	FSW = 0.0138	Unknown	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 2 (PRS2)
AT2G26060	Predicted Gene fusion method Gene neighbors method	FSW = 0.0027	Unknown	EMB1345 (EMBRYO DEFECTIVE 1345) NUCLEOTIDE BINDING

Downloads

Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

AtPIN will be upgraded. Please send your suggestions here

AT2G35390 - ( ribose-phosphate pyrophosphokinase 1 / phosphoribosyl diphosphate synthetase 1 (PRSI) )

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown

Unknown