Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT5G26340 - ( MSS1 carbohydrate transmembrane transporter/ hexosehydrogen symporter/ high-affinity hydrogenglucose symporter/ sugarhydrogen symporter )

121 Proteins interacs with AT5G26340
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT4G27090

Predicted

Phenotypic Enhancement

FSW = 0.1506

Class C:

plasma membrane

60S RIBOSOMAL PROTEIN L14 (RPL14B)
AT3G09630

Predicted

Phenotypic Suppression

FSW = 0.0146

Class C:

plasma membrane

60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT2G01250

Predicted

two hybrid

FSW = 0.0079

Class C:

plasma membrane

60S RIBOSOMAL PROTEIN L7 (RPL7B)
AT1G72730

Predicted

Synthetic Lethality

Synthetic Lethality

FSW = 0.0020

Class C:

plasma membrane

EUKARYOTIC TRANSLATION INITIATION FACTOR 4A PUTATIVE / EIF-4A PUTATIVE
AT3G08710

Predicted

two hybrid

Phenotypic Enhancement

FSW = 0.0590

Class C:

plasma membrane

ATH9 (THIOREDOXIN H-TYPE 9)
AT4G25100

Predicted

two hybrid

FSW = 0.0184

Class C:

plasma membrane

FSD1 (FE SUPEROXIDE DISMUTASE 1) COPPER ION BINDING / SUPEROXIDE DISMUTASE
AT1G01620

Predicted

Phenotypic Enhancement

FSW = 0.0187

Class C:

plasma membrane

PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C) WATER CHANNEL
AT2G42590

Predicted

two hybrid

FSW = 0.0414

Class C:

plasma membrane

GRF9 (GENERAL REGULATORY FACTOR 9) CALCIUM ION BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT4G36490

Predicted

Reconstituted Complex

interologs mapping

Affinity Capture-Western

FSW = 0.0607

Class C:

plasma membrane

SFH12 (SEC14-LIKE 12) PHOSPHATIDYLINOSITOL TRANSPORTER/ TRANSPORTER
AT1G50310

Predicted

Phenotypic Suppression

FSW = 0.0177

Class C:

plasma membrane

STP9 (SUGAR TRANSPORTER 9) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G19930

Predicted

Phenotypic Enhancement

FSW = 0.1299

Class C:

plasma membrane

STP4 (SUGAR TRANSPORTER 4) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUCROSEHYDROGEN SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT1G32090

Predicted

Synthetic Rescue

FSW = 0.0225

Class C:

plasma membrane

EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT3G20920

Predicted

Phenotypic Enhancement

FSW = 0.1122

Class C:

plasma membrane

TRANSLOCATION PROTEIN-RELATED
AT4G18760

Predicted

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.1094

Class C:

plasma membrane

ATRLP51 (RECEPTOR LIKE PROTEIN 51) PROTEIN BINDING
AT1G69850

Predicted

Co-purification

Affinity Capture-MS

two hybrid

Affinity Capture-Western

two hybrid

Affinity Capture-Western

two hybrid

Affinity Capture-MS

Co-purification

FSW = 0.2636

Class C:

plasma membrane

ATNRT12 (ARABIDOPSIS THALIANA NITRATE TRANSPORTER 12) CALCIUM ION BINDING / TRANSPORTER
AT3G53960

Predicted

Affinity Capture-Western

Affinity Capture-Western

FSW = 0.0572

Class C:

plasma membrane

PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN
AT1G77210

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.0129

Class C:

plasma membrane

SUGAR TRANSPORTER PUTATIVE
AT2G39480

Predicted

Phenotypic Enhancement

FSW = 0.1391

Class C:

plasma membrane

PGP6 (P-GLYCOPROTEIN 6) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT2G17440

Predicted

Gene fusion method

FSW = 0.0169

Class C:

plasma membrane

LEUCINE-RICH REPEAT FAMILY PROTEIN
AT5G02490

Predicted

two hybrid

FSW = 0.0291

Class C:

plasma membrane

HEAT SHOCK COGNATE 70 KDA PROTEIN 2 (HSC70-2) (HSP70-2)
AT3G47520

Predicted

Phenotypic Enhancement

FSW = 0.1437

Unknown

MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT3G20660

Predicted

Gene fusion method

FSW = 0.0285

Unknown

ATOCT4 (ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER4) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT4G16660

Predicted

Synthetic Rescue

Phenotypic Suppression

FSW = 0.1179

Unknown

HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT1G15880

Predicted

two hybrid

FSW = 0.0180

Unknown

GOS11 (GOLGI SNARE 11) SNARE BINDING
AT4G18160

Predicted

Phenotypic Enhancement

FSW = 0.0320

Unknown

KCO6 OUTWARD RECTIFIER POTASSIUM CHANNEL
AT5G24770

Predicted

Affinity Capture-MS

FSW = 0.0242

Unknown

VSP2 (VEGETATIVE STORAGE PROTEIN 2) ACID PHOSPHATASE
AT3G53740

Predicted

Affinity Capture-MS

FSW = 0.0099

Unknown

60S RIBOSOMAL PROTEIN L36 (RPL36B)
AT5G10350

Predicted

Synthetic Rescue

FSW = 0.0707

Unknown

POLYADENYLATE-BINDING PROTEIN FAMILY PROTEIN / PABP FAMILY PROTEIN
AT1G11320

Predicted

two hybrid

FSW = 0.0192

Unknown

UNKNOWN PROTEIN
AT4G33650

Predicted

Phenotypic Suppression

FSW = 0.0387

Unknown

DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING
AT5G09660

Predicted

Phenotypic Enhancement

FSW = 0.0293

Unknown

PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) MALATE DEHYDROGENASE
AT3G45770

Predicted

two hybrid

FSW = 0.0532

Unknown

OXIDOREDUCTASE ZINC-BINDING DEHYDROGENASE FAMILY PROTEIN
AT1G55920

Predicted

Phenotypic Enhancement

FSW = 0.1865

Unknown

ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE
AT2G47680

Predicted

Affinity Capture-MS

FSW = 0.0215

Unknown

ZINC FINGER (CCCH TYPE) HELICASE FAMILY PROTEIN
AT3G55400

Predicted

Phenotypic Enhancement

FSW = 0.0686

Unknown

OVA1 (OVULE ABORTION 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ METHIONINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT2G45300

Predicted

Co-purification

FSW = 0.0534

Unknown

3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE / EPSP SYNTHASE
AT1G10070

Predicted

biochemical

biochemical

FSW = 0.0498

Unknown

ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) BRANCHED-CHAIN-AMINO-ACID TRANSAMINASE/ CATALYTIC
AT3G54670

Predicted

Phenotypic Enhancement

FSW = 0.0875

Unknown

TTN8 (TITAN8) ATP BINDING / TRANSPORTER
AT3G60180

Predicted

two hybrid

Synthetic Lethality

FSW = 0.0583

Unknown

URIDYLATE KINASE PUTATIVE / URIDINE MONOPHOSPHATE KINASE PUTATIVE / UMP KINASE PUTATIVE
AT2G34450

Predicted

Phenotypic Enhancement

FSW = 0.1191

Unknown

HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN
AT2G43810

Predicted

Synthetic Lethality

FSW = 0.0329

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN F PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE / SM PROTEIN F PUTATIVE
AT3G09680

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0562

Unknown

40S RIBOSOMAL PROTEIN S23 (RPS23A)
AT1G21190

Predicted

two hybrid

FSW = 0.0682

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT3G13445

Predicted

Phenotypic Enhancement

FSW = 0.0451

Unknown

TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT4G13980

Predicted

biochemical

FSW = 0.0161

Unknown

AT-HSFA5 DNA BINDING / TRANSCRIPTION FACTOR
AT1G56110

Predicted

Affinity Capture-MS

two hybrid

Reconstituted Complex

Affinity Capture-MS

Affinity Capture-Western

synthetic growth defect

FSW = 0.0348

Unknown

NOP56 (ARABIDOPSIS HOMOLOG OF NUCLEOLAR PROTEIN NOP56)
AT1G28460

Predicted

Synthetic Rescue

FSW = 0.0339

Unknown

AGL59 (AGAMOUS-LIKE 59) DNA BINDING / TRANSCRIPTION FACTOR
AT1G53165

Predicted

Phenotypic Enhancement

FSW = 0.0977

Unknown

ATMAP4K ALPHA1 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT2G47210

Predicted

two hybrid

FSW = 0.0134

Unknown

MYB FAMILY TRANSCRIPTION FACTOR
AT4G39160

Predicted

two hybrid

FSW = 0.1048

Unknown

DNA BINDING / TRANSCRIPTION FACTOR
AT2G15430

Predicted

Phenotypic Enhancement

FSW = 0.0576

Unknown

NRPB3 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT5G60980

Predicted

Phenotypic Enhancement

FSW = 0.0241

Unknown

NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT3G29800

Predicted

Phenotypic Enhancement

FSW = 0.1029

Unknown

AAA-TYPE ATPASE FAMILY
AT1G10060

Predicted

two hybrid

FSW = 0.0399

Unknown

BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE 1 / BRANCHED-CHAIN AMINO ACID TRANSAMINASE 1 (BCAT1)
AT1G29330

Predicted

Phenotypic Enhancement

FSW = 0.0576

Unknown

ERD2 (ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2) KDEL SEQUENCE BINDING / RECEPTOR
AT5G24090

Predicted

Affinity Capture-MS

Synthetic Lethality

Affinity Capture-Western

Affinity Capture-MS

Synthetic Lethality

FSW = 0.1191

Unknown

ACIDIC ENDOCHITINASE (CHIB1)
AT2G19980

Predicted

Phenotypic Suppression

FSW = 0.0469

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT4G33730

Predicted

Phenotypic Enhancement

FSW = 0.1717

Unknown

PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT3G13320

Predicted

Phenotypic Enhancement

FSW = 0.0303

Unknown

CAX2 (CATION EXCHANGER 2) CALCIUMCATION ANTIPORTER/ CALCIUMHYDROGEN ANTIPORTER
AT4G39200

Predicted

Affinity Capture-MS

FSW = 0.0648

Unknown

40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT2G42120

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0041

Unknown

POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT) DNA BINDING / DNA-DIRECTED DNA POLYMERASE
AT1G18830Predicted

Phenotypic Enhancement

FSW = 0.1344

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G29230

Predicted

two hybrid

FSW = 0.0524

Unknown

CIPK18 (CBL-INTERACTING PROTEIN KINASE 18) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G31170

Predicted

Colocalization

FSW = 0.0891

Unknown

SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS
AT1G54560Predicted

Phenotypic Enhancement

biochemical

FSW = 0.0237

Unknown

XIE MOTOR/ PROTEIN BINDING
AT1G66240

Predicted

Affinity Capture-Western

FSW = 0.0505

Unknown

ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1) METAL ION BINDING
AT1G66740

Predicted

Affinity Capture-MS

two hybrid

Affinity Capture-MS

FSW = 0.0134

Unknown

SGA2
AT1G68200

Predicted

Synthetic Rescue

FSW = 0.0103

Unknown

ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN
AT1G68390

Predicted

two hybrid

FSW = 0.0450

Unknown

UNKNOWN PROTEIN
AT2G01830

Predicted

Phenotypic Enhancement

Affinity Capture-MS

FSW = 0.0781

Unknown

WOL (WOODEN LEG) CYTOKININ RECEPTOR/ OSMOSENSOR/ PHOSPHOPROTEIN PHOSPHATASE/ PROTEIN HISTIDINE KINASE
AT2G27170

Predicted

two hybrid

Phenotypic Suppression

Affinity Capture-Western

two hybrid

FSW = 0.0345

Unknown

TTN7 (TITAN7) ATP BINDING / PROTEIN BINDING
AT2G27340

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

synthetic growth defect

FSW = 0.1205

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN CONTAINS INTERPRO DOMAIN/S N-ACETYLGLUCOSAMINYL PHOSPHATIDYLINOSITOL DEACETYLASE (INTERPROIPR003737) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED (TAIRAT3G581302) HAS 325 BLAST HITS TO 323 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 42 METAZOA - 92 FUNGI - 108 PLANTS - 28 VIRUSES - 0 OTHER EUKARYOTES - 55 (SOURCE NCBI BLINK)
AT2G29190

Predicted

Phenotypic Enhancement

FSW = 0.2358

Unknown

APUM2 (ARABIDOPSIS PUMILIO 2) RNA BINDING / BINDING
AT2G33560

Predicted

interologs mapping

Synthetic Rescue

FSW = 0.0391

Unknown

SPINDLE CHECKPOINT PROTEIN-RELATED
AT2G34250

Predicted

interologs mapping

two hybrid

two hybrid

Colocalization

interologs mapping

Affinity Capture-Western

FSW = 0.0582

Unknown

PROTEIN TRANSPORT PROTEIN SEC61 PUTATIVE
AT2G35390

Predicted

Affinity Capture-MS

FSW = 0.0246

Unknown

RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1 / PHOSPHORIBOSYL DIPHOSPHATE SYNTHETASE 1 (PRSI)
AT2G40930

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

two hybrid

interologs mapping

FSW = 0.1825

Unknown

UBP5 (UBIQUITIN-SPECIFIC PROTEASE 5) UBIQUITIN-SPECIFIC PROTEASE
AT2G46650

Predicted

two hybrid

FSW = 0.1314

Unknown

CB5-C (CYTOCHROME B5 ISOFORM C) HEME BINDING
AT3G09800

Predicted

Phenotypic Enhancement

FSW = 0.1068

Unknown

PROTEIN BINDING
AT3G12200

Predicted

Phenotypic Suppression

FSW = 0.0700

Unknown

ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G12490

Predicted

Protein-peptide

FSW = 0.0268

Unknown

CYSTEINE PROTEASE INHIBITOR PUTATIVE / CYSTATIN PUTATIVE
AT3G12670

Predicted

Affinity Capture-MS

FSW = 0.0497

Unknown

EMB2742 (EMBRYO DEFECTIVE 2742) CTP SYNTHASE/ CATALYTIC
AT3G14740

Predicted

Phenotypic Enhancement

FSW = 0.0724

Unknown

PHD FINGER FAMILY PROTEIN
AT3G19450

Predicted

Affinity Capture-Western

two hybrid

interologs mapping

FSW = 0.0821

Unknown

ATCAD4 CINNAMYL-ALCOHOL DEHYDROGENASE
AT3G29060

Predicted

Phenotypic Enhancement

FSW = 0.1649

Unknown

LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 6 PLANT STRUCTURES EXPRESSED DURING L MATURE POLLEN STAGE M GERMINATED POLLEN STAGE 4 ANTHESIS PETAL DIFFERENTIATION AND EXPANSION STAGE CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G140401) HAS 970 BLAST HITS TO 889 PROTEINS IN 159 SPECIES ARCHAE - 2 BACTERIA - 5 METAZOA - 379 FUNGI - 260 PLANTS - 176 VIRUSES - 28 OTHER EUKARYOTES - 120 (SOURCE NCBI BLINK)
AT3G47120

Predicted

Protein-peptide

FSW = 0.0089

Unknown

RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT3G47300

Predicted

two hybrid

Affinity Capture-Western

Colocalization

co-fractionation

Co-fractionation

interologs mapping

Co-purification

FSW = 0.1082

Unknown

SELT (SELT-LIKE PROTEIN PRECURSOR) SELENIUM BINDING
AT3G61740

Predicted

Colocalization

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

co-fractionation

Co-fractionation

interologs mapping

Synthetic Lethality

FSW = 0.0790

Unknown

SDG14 (SET DOMAIN PROTEIN 14) DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT3G62760

Predicted

Synthetic Rescue

FSW = 0.0627

Unknown

ATGSTF13 GLUTATHIONE TRANSFERASE
AT4G21800

Predicted

Affinity Capture-MS

FSW = 0.0154

Unknown

QQT2 (QUATRE-QUART2) ATP BINDING / NUCLEOTIDE BINDING
AT4G25960

Predicted

two hybrid

FSW = 0.0137

Unknown

PGP2 (P-GLYCOPROTEIN 2) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT4G27130

Predicted

Affinity Capture-MS

Phenotypic Suppression

FSW = 0.0746

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G33950

Predicted

Phenotypic Enhancement

FSW = 0.0989

Unknown

OST1 (OPEN STOMATA 1) CALCIUM-DEPENDENT PROTEIN SERINE/THREONINE KINASE/ KINASE/ PROTEIN KINASE
AT4G39640

Predicted

Affinity Capture-MS

FSW = 0.0081

Unknown

GGT1 (GAMMA-GLUTAMYL TRANSPEPTIDASE 1) GAMMA-GLUTAMYLTRANSFERASE/ GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE
AT5G19300

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

synthetic growth defect

FSW = 0.1310

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 20 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NUCLEIC ACID-BINDING OB-FOLD-LIKE (INTERPROIPR016027) PROTEIN OF UNKNOWN FUNCTION DUF171 (INTERPROIPR003750) HAS 4766 BLAST HITS TO 2044 PROTEINS IN 217 SPECIES ARCHAE - 72 BACTERIA - 102 METAZOA - 2264 FUNGI - 372 PLANTS - 195 VIRUSES - 4 OTHER EUKARYOTES - 1757 (SOURCE NCBI BLINK)
AT5G25520

Predicted

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

two hybrid

Affinity Capture-MS

Co-purification

FSW = 0.0703

Unknown

TRANSCRIPTION ELONGATION FACTOR-RELATED
AT1G10210

Predicted

biochemical

biochemical

FSW = 0.0379

Unknown

ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE
AT2G47970

Predicted

Affinity Capture-MS

FSW = 0.0113

Unknown

NPL4 FAMILY PROTEIN
AT3G09640

Predicted

Affinity Capture-Western

FSW = 0.0582

Unknown

APX2 (ASCORBATE PEROXIDASE 2) L-ASCORBATE PEROXIDASE
AT3G17520

Predicted

Phenotypic Enhancement

FSW = 0.0313

Unknown

LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN
AT3G45240

Predicted

Affinity Capture-MS

FSW = 0.0365

Unknown

GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1) KINASE
AT3G52890

Predicted

two hybrid

FSW = 0.0180

Unknown

KIPK (KCBP-INTERACTING PROTEIN KINASE) KINASE/ PROTEIN BINDING / PROTEIN KINASE
AT4G04700

Predicted

interologs mapping

FSW = 0.0344

Unknown

CPK27 ATP BINDING / CALCIUM ION BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G14000

Predicted

biochemical

biochemical

synthetic growth defect

FSW = 0.0632

Unknown

UNKNOWN PROTEIN
AT4G14320Predicted

Affinity Capture-MS

FSW = 0.0362

Unknown

60S RIBOSOMAL PROTEIN L36A/L44 (RPL36AB)
AT4G25950

Predicted

biochemical

FSW = 0.0263

Unknown

VATG3 (VACUOLAR ATP SYNTHASE G3) HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT5G41820

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

FSW = 0.0586

Unknown

GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT-RELATED / RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT-RELATED
AT5G42600

Predicted

synthetic growth defect

FSW = 0.0272

Unknown

MRN1 (MARNERAL SYNTHASE) CATALYTIC/ MARNERAL SYNTHASE
AT5G48010

Predicted

Phenotypic Enhancement

FSW = 0.0124

Unknown

THAS1 (THALIANOL SYNTHASE 1) CATALYTIC/ THALIANOL SYNTHASE
AT5G52200

Predicted

Synthetic Lethality

FSW = 0.1374

Unknown

UNKNOWN PROTEIN
AT5G52210

Predicted

Phenotypic Enhancement

Phenotypic Enhancement

synthetic growth defect

Synthetic Lethality

two hybrid

FSW = 0.0663

Unknown

ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) GTP BINDING
AT5G54940

Predicted

Phenotypic Enhancement

FSW = 0.0473

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT5G55180

Predicted

Colocalization

Colocalization

FSW = 0.0951

Unknown

GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT5G57190

Predicted

Affinity Capture-Western

Affinity Capture-Western

two hybrid

Co-purification

Phenotypic Enhancement

FSW = 0.3138

Unknown

PSD2 (PHOSPHATIDYLSERINE DECARBOXYLASE 2) PHOSPHATIDYLSERINE DECARBOXYLASE
AT5G65690

Predicted

Phenotypic Enhancement

FSW = 0.1318

Unknown

PCK2 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 2) ATP BINDING / PHOSPHOENOLPYRUVATE CARBOXYKINASE (ATP)/ PHOSPHOENOLPYRUVATE CARBOXYKINASE/ PURINE NUCLEOTIDE BINDING
AT5G66410

Predicted

Phenotypic Enhancement

synthetic growth defect

FSW = 0.0592

Unknown

PLP3B (PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG) BETA-TUBULIN BINDING
AT5G38110

Predicted

two hybrid

FSW = 0.1361

Unknown

ASF1B (ANTI- SILENCING FUNCTION 1B)
AT5G38290

Predicted

two hybrid

FSW = 0.0388

Unknown

PEPTIDYL-TRNA HYDROLASE FAMILY PROTEIN
AT5G57330

Predicted

Affinity Capture-MS

FSW = 0.0082

Unknown

ALDOSE 1-EPIMERASE FAMILY PROTEIN
AT5G63650

Predicted

two hybrid

FSW = 0.0242

Unknown

SNRK25 (SNF1-RELATED PROTEIN KINASE 25) KINASE
AT2G20780

Predicted

Gene fusion method

FSW = 0.0181

Unknown

MANNITOL TRANSPORTER PUTATIVE

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Fasta sequences:

Proteins

DNA

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454