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AT5G10350 - ( polyadenylate-binding protein family protein / PABP family protein )

112 Proteins interacs with AT5G10350

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G27030	Experimental pull down	FSW = 0.0026	Class A: vacuole Class B: plasma membrane Class D: nucleus (p = 0.78) cytosol (p = 0.67)	CAM5 (CALMODULIN 5) CALCIUM ION BINDING
AT4G32850	Experimental	FSW = 0.0252	Unknown	NPAP (NUCLEAR POLY(A) POLYMERASE) NUCLEOTIDYLTRANSFERASE/ PROTEIN BINDING
AT5G58040	Experimental	FSW = 0.0637	Unknown	ATFIP1[V] (ARABIDOPSIS HOMOLOG OF YEAST FIP1 [V]) RNA BINDING / PROTEIN BINDING
AT1G17760	Experimental	FSW = 0.0060	Unknown	CSTF77 PROTEIN BINDING
AT5G51120	Experimental	FSW = 0.1280	Unknown	PABN1 (POLYADENYLATE-BINDING PROTEIN 1) RNA BINDING / POLY(A) BINDING / PROTEIN BINDING
AT5G65260	Experimental	FSW = 0.0645	Unknown	POLYADENYLATE-BINDING PROTEIN FAMILY PROTEIN / PABP FAMILY PROTEIN
AT1G07660	Predicted Co-crystal Structure Affinity Capture-Western Co-crystal Structure Co-purification Affinity Capture-MS two hybrid	FSW = 0.0659	Class C: vacuole	HISTONE H4
AT5G60640	Predicted Affinity Capture-MS	FSW = 0.0037	Class C: vacuole	ATPDIL1-4 (PDI-LIKE 1-4) PROTEIN DISULFIDE ISOMERASE
AT4G16660	Predicted Synthetic Lethality	FSW = 0.1958	Class C: vacuole	HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE
AT3G09440	Predicted Phenotypic Enhancement	FSW = 0.0180	Class C: vacuole	HEAT SHOCK COGNATE 70 KDA PROTEIN 3 (HSC70-3) (HSP70-3)
AT5G12010	Predicted Affinity Capture-Western Affinity Capture-Western Synthetic Lethality Reconstituted Complex Protein-peptide Synthetic Lethality Affinity Capture-Western	FSW = 0.0622	Class C: vacuole	UNKNOWN PROTEIN
AT4G12650	Predicted Phenotypic Enhancement	FSW = 0.0784	Class C: vacuole	LOCATED IN INTEGRAL TO MEMBRANE GOLGI APPARATUS PLASMA MEMBRANE VACUOLE EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NONASPANIN (TM9SF) (INTERPROIPR004240) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G351601) HAS 983 BLAST HITS TO 980 PROTEINS IN 161 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 434 FUNGI - 144 PLANTS - 228 VIRUSES - 0 OTHER EUKARYOTES - 177 (SOURCE NCBI BLINK)
AT3G22110	Predicted Affinity Capture-MS	FSW = 0.0440	Class C: vacuole	PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT3G26590	Predicted biochemical	FSW = 0.0316	Class C: vacuole	MATE EFFLUX FAMILY PROTEIN
AT1G74560	Predicted Phenotypic Enhancement	FSW = 0.0243	Unknown	NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING
AT3G52140	Predicted Affinity Capture-MS	FSW = 0.0122	Unknown	TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN
AT2G45960	Predicted Affinity Capture-MS Synthetic Lethality Reconstituted Complex two hybrid two hybrid Affinity Capture-MS Affinity Capture-MS far western blotting Affinity Capture-MS Affinity Capture-Western Reconstituted Complex biochemical Synthetic Lethality interologs mapping	FSW = 0.0813	Unknown	PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B) WATER CHANNEL
AT5G65430	Predicted Phenotypic Enhancement	FSW = 0.0618	Unknown	GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G22170	Predicted Affinity Capture-MS Affinity Capture-MS synthetic growth defect	FSW = 0.0813	Unknown	PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE FAMILY PROTEIN
AT3G44610	Predicted Affinity Capture-MS	FSW = 0.0507	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT2G29690	Predicted Reconstituted Complex two hybrid	FSW = 0.0557	Unknown	ASA2 (ANTHRANILATE SYNTHASE 2) ANTHRANILATE SYNTHASE
AT2G45300	Predicted Synthetic Rescue Synthetic Rescue Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Phenotypic Suppression Co-purification	FSW = 0.1543	Unknown	3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE / EPSP SYNTHASE
AT1G10070	Predicted Synthetic Lethality Colocalization	FSW = 0.0855	Unknown	ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) BRANCHED-CHAIN-AMINO-ACID TRANSAMINASE/ CATALYTIC
AT2G43030	Predicted Phenotypic Enhancement	FSW = 0.0167	Unknown	RIBOSOMAL PROTEIN L3 FAMILY PROTEIN
AT3G11964	Predicted Affinity Capture-MS Co-expression	FSW = 0.0273	Unknown	RNA BINDING
AT1G71860	Predicted Affinity Capture-Western Reconstituted Complex Affinity Capture-Western Reconstituted Complex	FSW = 0.0340	Unknown	PTP1 (PROTEIN TYROSINE PHOSPHATASE 1) PROTEIN TYROSINE PHOSPHATASE
AT3G47370	Predicted Affinity Capture-MS Reconstituted Complex	FSW = 0.0188	Unknown	40S RIBOSOMAL PROTEIN S20 (RPS20B)
AT3G02600	Predicted Affinity Capture-Western biochemical Co-purification	FSW = 0.0742	Unknown	LPP3 (LIPID PHOSPHATE PHOSPHATASE 3) PHOSPHATIDATE PHOSPHATASE
AT4G36490	Predicted Affinity Capture-MS	FSW = 0.1496	Unknown	SFH12 (SEC14-LIKE 12) PHOSPHATIDYLINOSITOL TRANSPORTER/ TRANSPORTER
AT4G36640	Predicted Affinity Capture-MS Synthetic Lethality Synthetic Lethality Synthetic Lethality Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS interologs mapping interologs mapping Co-crystal Structure Affinity Capture-Western Affinity Capture-MS Co-crystal Structure interologs mapping Co-purification	FSW = 0.1192	Unknown	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT1G16300	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0070	Unknown	GAPCP-2 NAD OR NADH BINDING / BINDING / CATALYTIC/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (PHOSPHORYLATING)/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
AT5G23900	Predicted Protein-peptide Synthetic Rescue	FSW = 0.0694	Unknown	60S RIBOSOMAL PROTEIN L13 (RPL13D)
AT2G32670	Predicted Affinity Capture-Western Affinity Capture-Western co-fractionation Co-fractionation	FSW = 0.1742	Unknown	ATVAMP725
AT4G25740	Predicted Affinity Capture-MS Co-crystal Structure Affinity Capture-Western Co-crystal Structure Affinity Capture-MS	FSW = 0.2198	Unknown	40S RIBOSOMAL PROTEIN S10 (RPS10A)
AT5G02490	Predicted Affinity Capture-MS	FSW = 0.0086	Unknown	HEAT SHOCK COGNATE 70 KDA PROTEIN 2 (HSC70-2) (HSP70-2)
AT3G02740	Predicted Phenotypic Enhancement	FSW = 0.0195	Unknown	ASPARTYL PROTEASE FAMILY PROTEIN
AT4G04340	Predicted Phenotypic Enhancement	FSW = 0.0149	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT1G32090	Predicted biochemical	FSW = 0.0602	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT5G26340	Predicted Synthetic Rescue	FSW = 0.0707	Unknown	MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT5G48880	Predicted biochemical biochemical biochemical biochemical biochemical biochemical far western blotting	FSW = 0.1124	Unknown	PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2) ACETYL-COA C-ACYLTRANSFERASE/ CATALYTIC
AT3G04460	Predicted Protein-peptide Synthetic Lethality Reconstituted Complex biochemical	FSW = 0.1588	Unknown	PEX12 PROTEIN BINDING / ZINC ION BINDING
AT3G60180	Predicted Affinity Capture-MS Co-crystal Structure Affinity Capture-MS Affinity Capture-MS Co-crystal Structure Affinity Capture-MS Affinity Capture-Western two hybrid Co-purification	FSW = 0.2241	Unknown	URIDYLATE KINASE PUTATIVE / URIDINE MONOPHOSPHATE KINASE PUTATIVE / UMP KINASE PUTATIVE
AT5G54840	Predicted Affinity Capture-Western Affinity Capture-Western Reconstituted Complex two hybrid	FSW = 0.0278	Unknown	SGP1 GTP BINDING
AT1G56110	Predicted Reconstituted Complex	FSW = 0.0623	Unknown	NOP56 (ARABIDOPSIS HOMOLOG OF NUCLEOLAR PROTEIN NOP56)
AT2G47620	Predicted Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Co-crystal Structure Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Co-crystal Structure Co-purification	FSW = 0.0780	Unknown	ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING
AT3G57300	Predicted Phenotypic Enhancement	FSW = 0.0212	Unknown	INO80 (INO80 ORTHOLOG) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT5G19310	Predicted biochemical Affinity Capture-Western	FSW = 0.0209	Unknown	HOMEOTIC GENE REGULATOR PUTATIVE
AT4G25630	Predicted Affinity Capture-MS	FSW = 0.0172	Unknown	FIB2 (FIBRILLARIN 2) SNORNA BINDING
AT2G28740	Predicted Affinity Capture-MS two hybrid Co-crystal Structure Affinity Capture-MS	FSW = 0.1309	Unknown	HIS4 DNA BINDING
AT4G25340	Predicted Affinity Capture-Western synthetic growth defect Affinity Capture-Western Reconstituted Complex	FSW = 0.1622	Unknown	IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT1G63810	Predicted Affinity Capture-MS	FSW = 0.0126	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NRAP PROTEIN (INTERPROIPR005554) HAS 268 BLAST HITS TO 263 PROTEINS IN 124 SPECIES ARCHAE - 3 BACTERIA - 0 METAZOA - 116 FUNGI - 89 PLANTS - 17 VIRUSES - 0 OTHER EUKARYOTES - 43 (SOURCE NCBI BLINK)
AT3G18480	Predicted Affinity Capture-Western Affinity Capture-Western Co-purification	FSW = 0.1371	Unknown	ATCASP (ARABIDOPSIS THALIANA CCAAT-DISPLACEMENT PROTEIN ALTERNATIVELY SPLICED PRODUCT)
AT4G33710	Predicted biochemical	FSW = 0.0447	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT5G24090	Predicted Affinity Capture-MS	FSW = 0.0762	Unknown	ACIDIC ENDOCHITINASE (CHIB1)
AT3G45280	Predicted two hybrid Reconstituted Complex two hybrid	FSW = 0.0830	Unknown	SYP72 (SYNTAXIN OF PLANTS 72) PROTEIN TRANSPORTER
AT5G08335	Predicted Phenotypic Enhancement	FSW = 0.0432	Unknown	ATSTE14B PROTEIN-S-ISOPRENYLCYSTEINE O-METHYLTRANSFERASE
AT3G60360	Predicted Affinity Capture-MS	FSW = 0.2005	Unknown	EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14)
AT4G16420	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Reconstituted Complex Affinity Capture-Western Protein-peptide	FSW = 0.1439	Unknown	ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR
AT5G10330	Predicted Synthetic Lethality	FSW = 0.0583	Unknown	HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1) HISTIDINOL-PHOSPHATE TRANSAMINASE
AT3G13900	Predicted Affinity Capture-MS	FSW = 0.0227	Unknown	ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM
AT1G02100	Predicted Co-crystal Structure Affinity Capture-MS Co-purification Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western Co-crystal Structure Co-purification	FSW = 0.1377	Unknown	LEUCINE CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
AT1G09580	Predicted Affinity Capture-MS	FSW = 0.0275	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G10940	Predicted Reconstituted Complex	FSW = 0.0038	Unknown	SNRK24 (SNF1-RELATED PROTEIN KINASE 24) KINASE
AT1G13580	Predicted Synthetic Lethality Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interologs mapping Synthetic Lethality Phenotypic Enhancement	FSW = 0.2237	Unknown	LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)
AT1G29970	Predicted Synthetic Lethality Affinity Capture-Western	FSW = 0.1875	Unknown	RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)
AT1G34580	Predicted Affinity Capture-Western interologs mapping two hybrid	FSW = 0.0821	Unknown	MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G49520	Predicted Affinity Capture-Western	FSW = 0.0138	Unknown	SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN
AT1G78770	Predicted Affinity Capture-Western	FSW = 0.0892	Unknown	CELL DIVISION CYCLE FAMILY PROTEIN
AT2G33560	Predicted Affinity Capture-MS Co-crystal Structure Affinity Capture-MS Co-purification Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Co-crystal Structure Co-purification Phenotypic Enhancement	FSW = 0.2596	Unknown	SPINDLE CHECKPOINT PROTEIN-RELATED
AT2G34750	Predicted Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western	FSW = 0.2159	Unknown	RNA POLYMERASE I SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3 FAMILY PROTEIN
AT2G34890	Predicted two hybrid Affinity Capture-MS Affinity Capture-MS Co-crystal Structure Affinity Capture-MS Co-purification Affinity Capture-Western Co-crystal Structure Co-purification two hybrid Synthetic Lethality synthetic growth defect	FSW = 0.1678	Unknown	CTP SYNTHASE PUTATIVE / UTP--AMMONIA LIGASE PUTATIVE
AT3G06483	Predicted Affinity Capture-MS Synthetic Lethality Affinity Capture-Western	FSW = 0.1449	Unknown	PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G09640	Predicted Co-purification Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Co-purification Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Co-crystal Structure Co-purification co-fractionation Co-fractionation	FSW = 0.2323	Unknown	APX2 (ASCORBATE PEROXIDASE 2) L-ASCORBATE PEROXIDASE
AT3G11230	Predicted Phenotypic Enhancement	FSW = 0.1062	Unknown	YIPPEE FAMILY PROTEIN
AT3G15460	Predicted Affinity Capture-Western Reconstituted Complex	FSW = 0.0336	Unknown	BRIX DOMAIN-CONTAINING PROTEIN
AT3G21460	Predicted biochemical biochemical	FSW = 0.1252	Unknown	ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE
AT3G62760	Predicted Reconstituted Complex Reconstituted Complex Affinity Capture-Western Co-crystal Structure Synthetic Lethality	FSW = 0.1389	Unknown	ATGSTF13 GLUTATHIONE TRANSFERASE
AT4G04700	Predicted Reconstituted Complex Colocalization	FSW = 0.0829	Unknown	CPK27 ATP BINDING / CALCIUM ION BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G13020	Predicted Affinity Capture-MS Affinity Capture-MS Protein-peptide	FSW = 0.0550	Unknown	MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G38250	Predicted biochemical biochemical Synthetic Rescue biochemical	FSW = 0.0725	Unknown	AMINO ACID TRANSPORTER FAMILY PROTEIN
AT1G22290	Predicted two hybrid Affinity Capture-Western synthetic growth defect	FSW = 0.0583	Unknown	14-3-3 PROTEIN GF14 PUTATIVE (GRF10)
AT1G23460	Predicted Phenotypic Enhancement	FSW = 0.0591	Unknown	POLYGALACTURONASE
AT1G55300	Predicted Phenotypic Enhancement	FSW = 0.0781	Unknown	TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G66590	Predicted Phenotypic Enhancement	FSW = 0.0269	Unknown	COX19 FAMILY PROTEIN
AT1G68200	Predicted biochemical	FSW = 0.0282	Unknown	ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN
AT2G16230	Predicted Co-purification	FSW = 0.0784	Unknown	CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT2G34250	Predicted Synthetic Rescue	FSW = 0.0153	Unknown	PROTEIN TRANSPORT PROTEIN SEC61 PUTATIVE
AT3G09700	Predicted Phenotypic Enhancement	FSW = 0.0504	Unknown	DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT3G24010	Predicted Synthetic Lethality	FSW = 0.0760	Unknown	ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT4G10360	Predicted Phenotypic Enhancement	FSW = 0.0363	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G313002) HAS 453 BLAST HITS TO 451 PROTEINS IN 101 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 225 FUNGI - 97 PLANTS - 91 VIRUSES - 3 OTHER EUKARYOTES - 37 (SOURCE NCBI BLINK)
AT4G20870	Predicted Affinity Capture-Western	FSW = 0.0682	Unknown	FAH2 (FATTY ACID HYDROXYLASE 2) CATALYTIC/ FATTY ACID ALPHA-HYDROXYLASE
AT4G21480	Predicted Phenotypic Enhancement	FSW = 0.0530	Unknown	CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT4G23420	Predicted Phenotypic Enhancement	FSW = 0.0176	Unknown	SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT4G23895	Predicted Phenotypic Enhancement	FSW = 0.0336	Unknown	PLECKSTRIN HOMOLOGY (PH) DOMAIN-CONTAINING PROTEIN-RELATED
AT5G10830	Predicted Phenotypic Enhancement	FSW = 0.0417	Unknown	EMBRYO-ABUNDANT PROTEIN-RELATED
AT5G14180	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS synthetic growth defect	FSW = 0.2921	Unknown	MPL1 (MYZUS PERSICAE-INDUCED LIPASE 1) CATALYTIC
AT5G16290	Predicted two hybrid two hybrid Protein-peptide two hybrid Reconstituted Complex synthetic growth defect	FSW = 0.0628	Unknown	ACETOLACTATE SYNTHASE SMALL SUBUNIT PUTATIVE
AT5G26250	Predicted Affinity Capture-Western	FSW = 0.0536	Unknown	SUGAR TRANSPORTER PUTATIVE
AT5G27970	Predicted Reconstituted Complex Affinity Capture-Western	FSW = 0.0179	Unknown	BINDING
AT5G54940	Predicted Affinity Capture-Western Affinity Capture-MS	FSW = 0.0968	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT5G64760	Predicted Phenotypic Enhancement	FSW = 0.0868	Unknown	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)
AT5G67540	Predicted co-fractionation Co-fractionation Co-purification	FSW = 0.1126	Unknown	GLYCOSYL HYDROLASE FAMILY PROTEIN 43
AT5G38030	Predicted Affinity Capture-Western	FSW = 0.0314	Unknown	MATE EFFLUX FAMILY PROTEIN
AT5G02530	Predicted Affinity Capture-MS Co-expression	FSW = 0.0103	Unknown	RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE
AT1G67070	Predicted Affinity Capture-MS	FSW = 0.0183	Unknown	DIN9 (DARK INDUCIBLE 9) MANNOSE-6-PHOSPHATE ISOMERASE
AT1G21160	Predicted Affinity Capture-MS	FSW = 0.0152	Unknown	GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT5G40490	Predicted Affinity Capture-MS	FSW = 0.0098	Unknown	RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT1G17370	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0195	Unknown	UBP1B (OLIGOURIDYLATE BINDING PROTEIN 1B) MRNA 3-UTR BINDING
AT3G60240	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interologs mapping synthetic growth defect	FSW = 0.0233	Unknown	EIF4G (EUKARYOTIC TRANSLATION INITIATION FACTOR 4G) TRANSLATION INITIATION FACTOR
AT1G22760	Predicted Affinity Capture-MS Affinity Capture-Western interologs mapping	FSW = 0.0175	Unknown	PAB3 (POLY(A) BINDING PROTEIN 3) RNA BINDING / TRANSLATION INITIATION FACTOR
AT4G34490	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0084	Unknown	ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1) ACTIN BINDING
AT2G31740	Predicted two hybrid Co-expression	FSW = 0.0186	Unknown	METHYLTRANSFERASE

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT5G10350 - ( polyadenylate-binding protein family protein / PABP family protein )

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