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AT3G22110 - ( PAC1 endopeptidase/ peptidase/ threonine-type endopeptidase )

184 Proteins interacs with AT3G22110

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G25490	Experimental biochemical	FSW = 0.0635	Class D: mitochondrion (p = 0.82) cytosol (p = 0.67)	EBF1 (EIN3-BINDING F BOX PROTEIN 1) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT1G21720	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1508	Class C: vacuole	PBC1 (PROTEASOME BETA SUBUNIT C1) PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT3G09630	Predicted Phenotypic Suppression	FSW = 0.0460	Class C: vacuole	60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT4G38510	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0812	Class C: vacuole	VACUOLAR ATP SYNTHASE SUBUNIT B PUTATIVE / V-ATPASE B SUBUNIT PUTATIVE / VACUOLAR PROTON PUMP B SUBUNIT PUTATIVE / V-ATPASE 57 KDA SUBUNIT PUTATIVE
AT5G19320	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interologs mapping	FSW = 0.0711	Class C: vacuole	RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2) RAN GTPASE ACTIVATOR
AT5G09590	Predicted Phenotypic Enhancement	FSW = 0.1069	Class C: vacuole	MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT1G20260	Predicted Phenotypic Enhancement	FSW = 0.0600	Class C: vacuole	HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT3G51260	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Gene fusion method Phylogenetic profile method Co-expression	FSW = 0.1917	Class C: vacuole	PAD1 (20S PROTEASOME ALPHA SUBUNIT PAD1) ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G66140	Predicted Gene fusion method Phylogenetic profile method Co-expression	FSW = 0.0975	Class C: vacuole	PAD2 (PROTEASOME ALPHA SUBUNIT D 2) ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT3G49010	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0399	Class C: vacuole	ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1) STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G19640	Predicted interologs mapping	FSW = 0.0221	Class C: vacuole	ARA7 GTP BINDING
AT3G22630	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Co-expression	FSW = 0.1250	Class C: vacuole	PBD1 (20S PROTEASOME BETA SUBUNIT D1) PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G53850	Predicted Affinity Capture-MS Affinity Capture-MS Phylogenetic profile method Co-expression	FSW = 0.2219	Class C: vacuole	PAE1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT2G27020	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Phylogenetic profile method Co-expression	FSW = 0.1937	Class C: vacuole	PAG1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G64790	Predicted Phenotypic Enhancement	FSW = 0.0433	Class C: vacuole	BINDING
AT5G35590	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction Phylogenetic profile method	FSW = 0.1860	Class C: vacuole	PAA1 (PROTEASOME ALPHA SUBUNIT A 1) ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G10350	Predicted Affinity Capture-MS	FSW = 0.0440	Class C: vacuole	POLYADENYLATE-BINDING PROTEIN FAMILY PROTEIN / PABP FAMILY PROTEIN
AT4G14800	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.1348	Class C: vacuole	PBD2 (20S PROTEASOME BETA SUBUNIT 2) PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT4G31300	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1476	Class C: vacuole	PBA1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G13710	Predicted Phenotypic Enhancement	FSW = 0.0686	Class C: vacuole	SMT1 (STEROL METHYLTRANSFERASE 1) STEROL 24-C-METHYLTRANSFERASE
AT5G13450	Predicted Phenotypic Enhancement	FSW = 0.0474	Unknown	ATP SYNTHASE DELTA CHAIN MITOCHONDRIAL PUTATIVE / H(+)-TRANSPORTING TWO-SECTOR ATPASE DELTA (OSCP) SUBUNIT PUTATIVE
AT3G60820	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1546	Unknown	PBF1 PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G67630	Predicted Phenotypic Enhancement	FSW = 0.0277	Unknown	DNA HELICASE PUTATIVE
AT5G59690	Predicted Phenotypic Enhancement	FSW = 0.0641	Unknown	HISTONE H4
AT5G22330	Predicted Phenotypic Enhancement	FSW = 0.0329	Unknown	RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1) PROTEIN BINDING
AT1G79280	Predicted Affinity Capture-MS	FSW = 0.0091	Unknown	NUA (NUCLEAR PORE ANCHOR)
AT5G54770	Predicted Phenotypic Enhancement	FSW = 0.0110	Unknown	THI1 PROTEIN HOMODIMERIZATION
AT5G15450	Predicted Phenotypic Suppression	FSW = 0.0550	Unknown	CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT5G51820	Predicted Phenotypic Suppression	FSW = 0.0865	Unknown	PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT2G40400	Predicted Phenotypic Enhancement	FSW = 0.0243	Unknown	UNKNOWN PROTEIN
AT2G28190	Predicted Phenotypic Enhancement	FSW = 0.0918	Unknown	CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2) SUPEROXIDE DISMUTASE
AT1G10070	Predicted biochemical	FSW = 0.0171	Unknown	ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) BRANCHED-CHAIN-AMINO-ACID TRANSAMINASE/ CATALYTIC
AT1G79720	Predicted Synthetic Rescue	FSW = 0.0292	Unknown	ASPARTYL PROTEASE FAMILY PROTEIN
AT5G63110	Predicted Phenotypic Enhancement	FSW = 0.0462	Unknown	HDA6 (HISTONE DEACETYLASE 6) HISTONE DEACETYLASE
AT5G60540	Predicted Phenotypic Enhancement	FSW = 0.0992	Unknown	PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT5G23630	Predicted Phenotypic Enhancement	FSW = 0.0714	Unknown	ATPASE E1-E2 TYPE FAMILY PROTEIN / HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILIY PROTEIN
AT4G36640	Predicted Synthetic Rescue	FSW = 0.0226	Unknown	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT1G05570	Predicted interaction prediction	FSW = 0.0094	Unknown	CALS1 (CALLOSE SYNTHASE 1) 13-BETA-GLUCAN SYNTHASE/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT4G15000	Predicted Phenotypic Enhancement	FSW = 0.0192	Unknown	60S RIBOSOMAL PROTEIN L27 (RPL27C)
AT5G42790	Predicted Affinity Capture-MS Affinity Capture-MS Phylogenetic profile method Co-expression	FSW = 0.1470	Unknown	PAF1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G32090	Predicted Phenotypic Enhancement	FSW = 0.0679	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT5G12480	Predicted biochemical	FSW = 0.0034	Unknown	CPK7 (CALMODULIN-DOMAIN PROTEIN KINASE 7) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT2G42500	Predicted Affinity Capture-MS interaction prediction	FSW = 0.1041	Unknown	PP2A-4 HYDROLASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT5G22770	Predicted Affinity Capture-MS	FSW = 0.0053	Unknown	ALPHA-ADR (ALPHA-ADAPTIN) BINDING / PROTEIN BINDING / PROTEIN TRANSPORTER
AT1G47250	Predicted Affinity Capture-MS Phylogenetic profile method Co-expression	FSW = 0.1557	Unknown	PAF2 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G10430	Predicted Affinity Capture-MS	FSW = 0.0818	Unknown	PP2A-2 PROTEIN SERINE/THREONINE PHOSPHATASE
AT1G80050	Predicted Phenotypic Suppression	FSW = 0.0549	Unknown	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) ADENINE PHOSPHORIBOSYLTRANSFERASE/ PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT2G19760	Predicted interologs mapping	FSW = 0.0121	Unknown	PRF1 (PROFILIN 1) ACTIN BINDING
AT2G37790	Predicted Affinity Capture-MS	FSW = 0.1054	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT5G59950	Predicted Affinity Capture-MS Affinity Capture-MS interologs mapping	FSW = 0.0533	Unknown	RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE
AT5G41370	Predicted synthetic growth defect Synthetic Rescue synthetic growth defect Synthetic Lethality	FSW = 0.0271	Unknown	XPB1 (ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ ATP-DEPENDENT HELICASE/ DNA BINDING / HELICASE/ HYDROLASE/ NUCLEIC ACID BINDING
AT4G05190	Predicted Synthetic Lethality	FSW = 0.0496	Unknown	ATK5 (ARABIDOPSIS THALIANA KINESIN 5) MICROTUBULE MOTOR
AT2G43810	Predicted Phenotypic Suppression	FSW = 0.0535	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN F PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE / SM PROTEIN F PUTATIVE
AT5G54840	Predicted Synthetic Rescue	FSW = 0.0175	Unknown	SGP1 GTP BINDING
AT1G55750	Predicted Phenotypic Enhancement	FSW = 0.0261	Unknown	TRANSCRIPTION FACTOR-RELATED
AT4G21010	Predicted Phenotypic Enhancement	FSW = 0.0255	Unknown	TRANSCRIPTION INITIATION FACTOR-RELATED
AT2G03870	Predicted Phenotypic Suppression	FSW = 0.0544	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT1G56110	Predicted Phenotypic Enhancement	FSW = 0.0111	Unknown	NOP56 (ARABIDOPSIS HOMOLOG OF NUCLEOLAR PROTEIN NOP56)
AT2G35670	Predicted Phenotypic Enhancement	FSW = 0.0743	Unknown	FIS2 (FERTILIZATION INDEPENDENT SEED 2) TRANSCRIPTION FACTOR
AT2G06210	Predicted Phenotypic Enhancement	FSW = 0.0742	Unknown	ELF8 (EARLY FLOWERING 8) BINDING
AT3G52250	Predicted Phenotypic Enhancement	FSW = 0.0997	Unknown	DNA BINDING / TRANSCRIPTION FACTOR
AT1G07370	Predicted Phenotypic Enhancement	FSW = 0.0678	Unknown	PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN) DNA BINDING / DNA POLYMERASE PROCESSIVITY FACTOR/ PROTEIN BINDING
AT1G65440	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0668	Unknown	GTB1 RNA BINDING / HYDROLASE ACTING ON ESTER BONDS / TRANSCRIPTION ELONGATION REGULATOR
AT2G13370	Predicted Phenotypic Enhancement	FSW = 0.0813	Unknown	CHR5 (CHROMATIN REMODELING 5) ATP BINDING / DNA BINDING / CHROMATIN BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G24500	Predicted Phenotypic Suppression	FSW = 0.0562	Unknown	FZF TRANSCRIPTION FACTOR
AT4G25340	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1254	Unknown	IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT5G25150	Predicted Phenotypic Enhancement	FSW = 0.0152	Unknown	TAF5 (TBP-ASSOCIATED FACTOR 5) NUCLEOTIDE BINDING / TRANSCRIPTION REGULATOR
AT4G12590	Predicted interologs mapping	FSW = 0.0161	Unknown	UNKNOWN PROTEIN
AT2G44950	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1034	Unknown	HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT2G30160	Predicted Phenotypic Enhancement	FSW = 0.1407	Unknown	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT1G75510	Predicted Phenotypic Enhancement	FSW = 0.0636	Unknown	TRANSCRIPTION INITIATION FACTOR IIF BETA SUBUNIT (TFIIF-BETA) FAMILY PROTEIN
AT2G19980	Predicted Phenotypic Enhancement	FSW = 0.1141	Unknown	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT4G33710	Predicted Phenotypic Suppression	FSW = 0.0369	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT3G54840	Predicted Phenotypic Enhancement	FSW = 0.1097	Unknown	ARA6 GTP BINDING / GTPASE
AT5G47720	Predicted Phenotypic Enhancement	FSW = 0.0325	Unknown	ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE
AT2G32590	Predicted Affinity Capture-MS	FSW = 0.0057	Unknown	INVOLVED IN MITOSIS MITOTIC CELL CYCLE LOCATED IN NUCLEUS CHLOROPLAST EXPRESSED IN 17 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S BARREN (INTERPROIPR008418) HAS 340 BLAST HITS TO 330 PROTEINS IN 142 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 135 FUNGI - 102 PLANTS - 21 VIRUSES - 1 OTHER EUKARYOTES - 81 (SOURCE NCBI BLINK)
AT1G16470	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS two hybrid Phylogenetic profile method Co-expression	FSW = 0.1677	Unknown	PAB1 (PROTEASOME SUBUNIT PAB1) ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT2G05840	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Phylogenetic profile method	FSW = 0.1753	Unknown	PAA2 (20S PROTEASOME SUBUNIT PAA2) ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT4G26840	Predicted Affinity Capture-MS	FSW = 0.0237	Unknown	SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) PROTEIN BINDING / PROTEIN TAG
AT1G13060	Predicted Co-purification Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1912	Unknown	PBE1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT2G05170	Predicted Phenotypic Suppression	FSW = 0.0855	Unknown	ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING
AT3G14290	Predicted Phylogenetic profile method Co-expression	FSW = 0.1082	Unknown	PAE2 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G49060	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.0522	Unknown	DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT4G17190	Predicted Synthetic Lethality Phenotypic Suppression Affinity Capture-Western	FSW = 0.1020	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT5G20850	Predicted Phenotypic Enhancement	FSW = 0.0267	Unknown	ATRAD51 ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING / SEQUENCE-SPECIFIC DNA BINDING
AT1G17810	Predicted synthetic growth defect	FSW = 0.0182	Unknown	BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN) WATER CHANNEL
AT2G36200	Predicted Affinity Capture-MS	FSW = 0.0751	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT5G64350	Predicted two hybrid	FSW = 0.0057	Unknown	FKBP12 (FK506-BINDING PROTEIN) FK506 BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT5G67380	Predicted biochemical	FSW = 0.0127	Unknown	CKA1 (CASEIN KINASE ALPHA 1) KINASE
AT1G10090	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.0629	Unknown	UNKNOWN PROTEIN
AT1G13580	Predicted Synthetic Rescue	FSW = 0.0863	Unknown	LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)
AT1G25155	Predicted Phenotypic Suppression	FSW = 0.0696	Unknown	ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G26320	Predicted Phenotypic Suppression	FSW = 0.0493	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT1G26690	Predicted Phenotypic Enhancement	FSW = 0.0567	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G27040	Predicted Phenotypic Enhancement	FSW = 0.0315	Unknown	NITRATE TRANSPORTER PUTATIVE
AT1G29150	Predicted Phenotypic Enhancement	FSW = 0.0862	Unknown	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)
AT1G30825	Predicted Affinity Capture-MS	FSW = 0.0292	Unknown	DIS2 (DISTORTED TRICHOMES 2) STRUCTURAL MOLECULE
AT1G31170	Predicted Phenotypic Enhancement	FSW = 0.0560	Unknown	SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS
AT1G51310	Predicted Phenotypic Suppression	FSW = 0.0804	Unknown	TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE
AT1G52500	Predicted Phenotypic Suppression	FSW = 0.0636	Unknown	ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G54290	Predicted two hybrid interaction prediction	FSW = 0.0083	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT1G54560	Predicted Phenotypic Enhancement	FSW = 0.0287	Unknown	XIE MOTOR/ PROTEIN BINDING
AT1G68020	Predicted Phenotypic Enhancement	FSW = 0.0896	Unknown	ATTPS6 ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT1G79210	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS two hybrid interaction prediction Phylogenetic profile method Co-expression	FSW = 0.1274	Unknown	20S PROTEASOME ALPHA SUBUNIT B PUTATIVE
AT1G79730	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.0830	Unknown	ELF7 (EARLY FLOWERING 7)
AT1G80710	Predicted Phenotypic Enhancement	FSW = 0.0379	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G20280	Predicted Synthetic Rescue Affinity Capture-Western Synthetic Rescue	FSW = 0.0300	Unknown	ZINC FINGER (CCCH-TYPE) FAMILY PROTEIN
AT2G20560	Predicted interologs mapping	FSW = 0.0142	Unknown	DNAJ HEAT SHOCK FAMILY PROTEIN
AT2G24960	Predicted Phenotypic Suppression	FSW = 0.0504	Unknown	UNKNOWN PROTEIN
AT2G34750	Predicted Phenotypic Enhancement	FSW = 0.1114	Unknown	RNA POLYMERASE I SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3 FAMILY PROTEIN
AT2G37420	Predicted Phenotypic Enhancement	FSW = 0.1689	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT3G01100	Predicted Phenotypic Enhancement	FSW = 0.0354	Unknown	HYP1 (HYPOTHETICAL PROTEIN 1)
AT3G02000	Predicted Phenotypic Suppression	FSW = 0.0843	Unknown	ROXY1 DISULFIDE OXIDOREDUCTASE
AT3G08650	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Phenotypic Enhancement	FSW = 0.1194	Unknown	METAL TRANSPORTER FAMILY PROTEIN
AT3G09640	Predicted Phenotypic Suppression	FSW = 0.0572	Unknown	APX2 (ASCORBATE PEROXIDASE 2) L-ASCORBATE PEROXIDASE
AT3G10070	Predicted Phenotypic Enhancement	FSW = 0.0437	Unknown	TAF12 (TBP-ASSOCIATED FACTOR 12) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT1G06790	Predicted Phenotypic Enhancement	FSW = 0.0175	Unknown	RNA POLYMERASE RPB7 N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT1G08780	Predicted Phenotypic Suppression	FSW = 0.1085	Unknown	AIP3 (ABI3-INTERACTING PROTEIN 3) UNFOLDED PROTEIN BINDING
AT1G10210	Predicted biochemical	FSW = 0.0114	Unknown	ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE
AT1G15440	Predicted Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.0306	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G18550	Predicted Phenotypic Enhancement	FSW = 0.0229	Unknown	ATP BINDING / MICROTUBULE MOTOR
AT1G22290	Predicted synthetic growth defect	FSW = 0.0365	Unknown	14-3-3 PROTEIN GF14 PUTATIVE (GRF10)
AT1G29990	Predicted Phenotypic Suppression	FSW = 0.1004	Unknown	PDF6 (PREFOLDIN 6) UNFOLDED PROTEIN BINDING
AT1G34580	Predicted Synthetic Rescue	FSW = 0.0509	Unknown	MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G56450	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1832	Unknown	PBG1 PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G59890	Predicted Phenotypic Enhancement	FSW = 0.0701	Unknown	SNL5 (SIN3-LIKE 5)
AT1G60620	Predicted Phenotypic Enhancement	FSW = 0.0201	Unknown	ATRPAC43 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT1G61040	Predicted Synthetic Lethality	FSW = 0.0882	Unknown	VIP5 (VERNALIZATION INDEPENDENCE 5) DNA BINDING
AT2G02760	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0676	Unknown	ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) UBIQUITIN-PROTEIN LIGASE
AT2G13680	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0063	Unknown	CALS5 (CALLOSE SYNTHASE 5) 13-BETA-GLUCAN SYNTHASE
AT2G17190	Predicted Phenotypic Suppression	FSW = 0.0180	Unknown	UBIQUITIN FAMILY PROTEIN
AT3G06483	Predicted synthetic growth defect	FSW = 0.0650	Unknown	PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G11270	Predicted Affinity Capture-MS Affinity Capture-MS interaction prediction	FSW = 0.0297	Unknown	MEE34 (MATERNAL EFFECT EMBRYO ARREST 34)
AT3G13330	Predicted Affinity Capture-MS	FSW = 0.1030	Unknown	BINDING
AT3G18860	Predicted Phenotypic Suppression	FSW = 0.1405	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G20800	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.0632	Unknown	RCD1-LIKE CELL DIFFERENTIATION PROTEIN PUTATIVE
AT3G21060	Predicted Synthetic Lethality	FSW = 0.0489	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G42660	Predicted Phenotypic Enhancement	FSW = 0.1104	Unknown	NUCLEOTIDE BINDING
AT3G61740	Predicted Synthetic Rescue	FSW = 0.0412	Unknown	SDG14 (SET DOMAIN PROTEIN 14) DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT3G62770	Predicted Affinity Capture-MS	FSW = 0.0152	Unknown	ATATG18A
AT4G27180	Predicted Synthetic Lethality	FSW = 0.0874	Unknown	ATK2 (ARABIDOPSIS THALIANA KINESIN 2) MICROTUBULE BINDING / MICROTUBULE MOTOR
AT4G32850	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS two hybrid Affinity Capture-Western	FSW = 0.0621	Unknown	NPAP (NUCLEAR POLY(A) POLYMERASE) NUCLEOTIDYLTRANSFERASE/ PROTEIN BINDING
AT4G38630	Predicted Affinity Capture-MS Affinity Capture-MS Phenotypic Enhancement synthetic growth defect interaction prediction	FSW = 0.2010	Unknown	RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR
AT5G01430	Predicted Phenotypic Enhancement	FSW = 0.0988	Unknown	GOT1-LIKE FAMILY PROTEIN
AT5G06150	Predicted Synthetic Rescue Synthetic Rescue	FSW = 0.0107	Unknown	CYC1BAT CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT5G10260	Predicted Phenotypic Suppression	FSW = 0.0969	Unknown	ATRABH1E (ARABIDOPSIS RAB GTPASE HOMOLOG H1E) GTP BINDING
AT5G14530	Predicted Phenotypic Enhancement	FSW = 0.0193	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT5G16040	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0664	Unknown	REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT5G16140	Predicted Synthetic Rescue	FSW = 0.0058	Unknown	PEPTIDYL-TRNA HYDROLASE FAMILY PROTEIN
AT5G23290	Predicted Phenotypic Suppression Affinity Capture-MS	FSW = 0.0749	Unknown	PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G26680	Predicted Phenotypic Suppression	FSW = 0.0500	Unknown	ENDONUCLEASE PUTATIVE
AT5G38890	Predicted Affinity Capture-MS Phenotypic Enhancement	FSW = 0.0244	Unknown	EXORIBONUCLEASE-RELATED
AT5G40530	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0985	Unknown	EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S METHYLTRANSFERASE-RELATED (INTERPROIPR007823) HAS 293 BLAST HITS TO 293 PROTEINS IN 141 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 93 FUNGI - 88 PLANTS - 22 VIRUSES - 0 OTHER EUKARYOTES - 90 (SOURCE NCBI BLINK)
AT5G41880	Predicted Phenotypic Suppression	FSW = 0.0158	Unknown	POLA3 DNA PRIMASE
AT5G45600	Predicted Phenotypic Suppression	FSW = 0.1217	Unknown	GAS41 PROTEIN BINDING
AT5G48120	Predicted Phenotypic Suppression	FSW = 0.0908	Unknown	BINDING
AT5G48640	Predicted Phenotypic Enhancement	FSW = 0.0481	Unknown	CYCLIN FAMILY PROTEIN
AT5G60870	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0691	Unknown	REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT3G22480	Predicted Phenotypic Suppression	FSW = 0.0745	Unknown	PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT3G24090	Predicted Phenotypic Suppression	FSW = 0.0289	Unknown	GLUTAMINE-FRUCTOSE-6-PHOSPHATE TRANSAMINASE (ISOMERIZING)/ SUGAR BINDING / TRANSAMINASE
AT3G45740	Predicted Affinity Capture-MS	FSW = 0.0188	Unknown	HYDROLASE FAMILY PROTEIN / HAD-SUPERFAMILY PROTEIN
AT3G47290	Predicted Phenotypic Enhancement	FSW = 0.0419	Unknown	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
AT3G47940	Predicted Affinity Capture-MS	FSW = 0.0249	Unknown	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT3G50780	Predicted Phenotypic Enhancement	FSW = 0.0449	Unknown	INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS PRLI-INTERACTING FACTOR-RELATED (TAIRAT1G638501) HAS 173 BLAST HITS TO 173 PROTEINS IN 14 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 8 FUNGI - 0 PLANTS - 164 VIRUSES - 0 OTHER EUKARYOTES - 1 (SOURCE NCBI BLINK)
AT3G54380	Predicted Phenotypic Suppression	FSW = 0.1068	Unknown	SAC3/GANP FAMILY PROTEIN
AT4G04695	Predicted Synthetic Rescue	FSW = 0.0742	Unknown	CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G13020	Predicted Phenotypic Enhancement	FSW = 0.0670	Unknown	MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G33240	Predicted Phenotypic Enhancement	FSW = 0.0806	Unknown	1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE/ ATP BINDING / PHOSPHATIDYLINOSITOL PHOSPHATE KINASE/ PROTEIN BINDING / ZINC ION BINDING
AT5G01770	Predicted Phenotypic Enhancement	FSW = 0.0549	Unknown	RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G04800	Predicted Phenotypic Enhancement	FSW = 0.0525	Unknown	40S RIBOSOMAL PROTEIN S17 (RPS17D)
AT5G15070	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.0363	Unknown	ACID PHOSPHATASE/ OXIDOREDUCTASE/ TRANSITION METAL ION BINDING
AT5G15400	Predicted Phenotypic Enhancement	FSW = 0.0181	Unknown	U-BOX DOMAIN-CONTAINING PROTEIN
AT5G15770	Predicted Affinity Capture-MS	FSW = 0.0135	Unknown	ATGNA1 (ARABIDOPSIS THALIANA GLUCOSE-6-PHOSPHATE ACETYLTRANSFERASE 1) N-ACETYLTRANSFERASE/ GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE
AT5G40580	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western	FSW = 0.1363	Unknown	PBB2 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G41340	Predicted Phenotypic Enhancement	FSW = 0.0378	Unknown	UBC4 (UBIQUITIN CONJUGATING ENZYME 4) UBIQUITIN-PROTEIN LIGASE
AT5G44830	Predicted Phenotypic Enhancement	FSW = 0.1107	Unknown	GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN
AT5G49510	Predicted Phenotypic Suppression	FSW = 0.0959	Unknown	PDF3 (PREFOLDIN 3) UNFOLDED PROTEIN BINDING
AT5G66100	Predicted Phenotypic Enhancement	FSW = 0.0734	Unknown	LA DOMAIN-CONTAINING PROTEIN
AT3G27430	Predicted Affinity Capture-MS	FSW = 0.1415	Unknown	PBB1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G10350	Predicted interologs mapping	FSW = 0.0182	Unknown	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT1G55255	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0261	Unknown	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT1G14400	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0367	Unknown	UBC1 (UBIQUITIN CARRIER PROTEIN 1) UBIQUITIN-PROTEIN LIGASE
AT3G49660	Predicted Synthetic Lethality	FSW = 0.0411	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT5G54670	Predicted interaction prediction	FSW = 0.0609	Unknown	ATK3 (ARABIDOPSIS THALIANA KINESIN 3) ATPASE/ MICROTUBULE BINDING / MICROTUBULE MOTOR

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT3G22110 - ( PAC1 endopeptidase/ peptidase/ threonine-type endopeptidase )

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