Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT5G01770 - ( RAPTOR2 (RAPTOR2) binding / nucleotide binding )
109 Proteins interacs with AT5G01770Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT4G16660 | PredictedPhenotypic Enhancement | FSW = 0.2437
| Unknown | HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE |
AT1G07810 | PredictedPhenotypic Enhancement | FSW = 0.0390
| Unknown | ECA1 (ER-TYPE CA2+-ATPASE 1) CALCIUM-TRANSPORTING ATPASE |
AT3G18140 | Predictedinteraction prediction | FSW = 0.0131
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT3G22110 | PredictedPhenotypic Enhancement | FSW = 0.0549
| Unknown | PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE |
AT1G74560 | PredictedPhenotypic Enhancement | FSW = 0.1894
| Unknown | NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING |
AT3G22890 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.2683
| Unknown | APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP) |
AT5G09660 | PredictedPhenotypic Enhancement | FSW = 0.2789
| Unknown | PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) MALATE DEHYDROGENASE |
AT3G45770 | PredictedReconstituted Complex | FSW = 0.0234
| Unknown | OXIDOREDUCTASE ZINC-BINDING DEHYDROGENASE FAMILY PROTEIN |
AT3G16950 | PredictedAffinity Capture-MS | FSW = 0.0202
| Unknown | LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE |
AT3G58610 | PredictedPhenotypic Enhancement | FSW = 0.2646
| Unknown | KETOL-ACID REDUCTOISOMERASE |
AT5G54770 | PredictedPhenotypic Enhancementinterologs mapping | FSW = 0.1954
| Unknown | THI1 PROTEIN HOMODIMERIZATION |
AT1G80030 | PredictedSynthetic Lethality | FSW = 0.0158
| Unknown | DNAJ HEAT SHOCK PROTEIN PUTATIVE |
AT1G64190 | Predictedinterologs mappinginterologs mappinginterologs mappingReconstituted ComplexReconstituted ComplexSynthetic Lethalityinterologs mapping | FSW = 0.2525
| Unknown | 6-PHOSPHOGLUCONATE DEHYDROGENASE FAMILY PROTEIN |
AT1G19660 | PredictedSynthetic Lethality | FSW = 0.0433
| Unknown | WOUND-RESPONSIVE FAMILY PROTEIN |
AT5G15450 | PredictedPhenotypic Suppression | FSW = 0.1603
| Unknown | CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING |
AT5G51820 | PredictedPhenotypic Enhancement | FSW = 0.1673
| Unknown | PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE |
AT1G48860 | PredictedPhenotypic Enhancement | FSW = 0.2828
| Unknown | 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE PUTATIVE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PUTATIVE / EPSP SYNTHASE PUTATIVE |
AT4G23430 | PredictedSynthetic Lethality | FSW = 0.0037
| Unknown | SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN |
ATCG00160 | PredictedPhenotypic Enhancement | FSW = 0.0075
| Unknown | CHLOROPLAST RIBOSOMAL PROTEIN S2 |
AT4G04340 | Predictedtwo hybridPhenotypic EnhancementReconstituted Complextwo hybridAffinity Capture-Westernco-fractionationCo-fractionationSynthetic RescueReconstituted ComplexPhenotypic Enhancement | FSW = 0.1982
| Unknown | EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED |
AT1G04750 | PredictedPhenotypic EnhancementAffinity Capture-MSAffinity Capture-MSReconstituted ComplexPhenotypic Enhancement | FSW = 0.3322
| Unknown | VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721) |
AT2G32670 | PredictedPhenotypic Suppression | FSW = 0.1243
| Unknown | ATVAMP725 |
AT2G44690 | Predictedtwo hybridinterologs mapping | FSW = 0.0529
| Unknown | ARAC9 GTP BINDING |
AT4G21680 | PredictedPhenotypic Enhancement | FSW = 0.1408
| Unknown | PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN |
AT4G33090 | PredictedPhenotypic Enhancement | FSW = 0.1078
| Unknown | APM1 (AMINOPEPTIDASE M1) AMINOPEPTIDASE |
AT1G07180 | PredictedPhenotypic Suppression | FSW = 0.0832
| Unknown | NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1) NADH DEHYDROGENASE |
AT1G21700 | PredictedPhenotypic Enhancement | FSW = 0.2282
| Unknown | ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING |
AT3G13445 | PredictedPhenotypic Enhancement | FSW = 0.0532
| Unknown | TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING |
AT2G03870 | PredictedAffinity Capture-MS | FSW = 0.0028
| Unknown | SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE |
AT1G77180 | PredictedCo-purificationtwo hybrid | FSW = 0.0110
| Unknown | CHROMATIN PROTEIN FAMILY |
AT1G06960 | PredictedCo-crystal StructureReconstituted ComplexAffinity Capture-MSAffinity Capture-Western | FSW = 0.1458
| Unknown | SMALL NUCLEAR RIBONUCLEOPROTEIN U2B PUTATIVE / SPLICEOSOMAL PROTEIN PUTATIVE |
AT2G36170 | PredictedPhenotypic EnhancementPhenotypic Suppression | FSW = 0.1643
| Unknown | UBIQUITIN EXTENSION PROTEIN 2 (UBQ2) / 60S RIBOSOMAL PROTEIN L40 (RPL40A) |
AT4G25340 | PredictedPhenotypic Suppression | FSW = 0.1817
| Unknown | IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
AT3G14270 | PredictedPhenotypic Suppressiontwo hybrid | FSW = 0.1309
| Unknown | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN |
AT2G30160 | PredictedPhenotypic Enhancement | FSW = 0.2145
| Unknown | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN |
AT2G14580 | PredictedSynthetic Lethality | FSW = 0.0043
| Unknown | ATPRB1 |
AT5G02730 | PredictedPhenotypic Enhancement | FSW = 0.1150
| Unknown | ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN |
AT4G29270 | PredictedPhenotypic Suppression | FSW = 0.0286
| Unknown | ACID PHOSPHATASE CLASS B FAMILY PROTEIN |
AT2G19980 | PredictedPhenotypic Enhancement | FSW = 0.1928
| Unknown | ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN |
AT3G54840 | Predictedsynthetic growth defectPhenotypic Enhancement | FSW = 0.2291
| Unknown | ARA6 GTP BINDING / GTPASE |
AT5G66020 | PredictedPhenotypic Enhancement | FSW = 0.0073
| Unknown | ATSAC1B (SUPPRESSOR OF ACTIN 1B) PHOSPHATIDYLINOSITOL-45-BISPHOSPHATE 5-PHOSPHATASE |
AT2G05170 | PredictedPhenotypic Suppression | FSW = 0.1433
| Unknown | ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING |
AT4G39200 | PredictedPhenotypic Enhancement | FSW = 0.2294
| Unknown | 40S RIBOSOMAL PROTEIN S25 (RPS25E) |
AT1G62800 | PredictedPhenotypic Enhancement | FSW = 0.2250
| Unknown | ASP4 (ASPARTATE AMINOTRANSFERASE 4) CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE/ TRANSFERASE TRANSFERRING NITROGENOUS GROUPS |
AT4G27070 | PredictedPhenotypic Suppression | FSW = 0.0797
| Unknown | TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2) TRYPTOPHAN SYNTHASE |
AT4G16420 | PredictedPhenotypic Enhancement | FSW = 0.0811
| Unknown | ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR |
AT1G19730 | Predictedtwo hybridPhenotypic Enhancementtwo hybrid | FSW = 0.0621
| Unknown | ATTRX4 OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR |
AT1G05180 | PredictedPhenotypic Suppression | FSW = 0.2508
| Unknown | AXR1 (AUXIN RESISTANT 1) SMALL PROTEIN ACTIVATING ENZYME |
AT4G17190 | PredictedPhenotypic Suppression | FSW = 0.1590
| Unknown | FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE |
AT1G50030 | PredictedAffinity Capture-WesternAffinity Capture-Westernin vitroin vivoAffinity Capture-MS | FSW = 0.0061
| Unknown | TOR (TARGET OF RAPAMYCIN) 1-PHOSPHATIDYLINOSITOL-3-KINASE/ PROTEIN BINDING |
AT1G07820 | PredictedSynthetic RescueSynthetic RescueSynthetic RescueSynthetic LethalitySynthetic LethalityReconstituted ComplexSynthetic LethalitySynthetic Rescue | FSW = 0.2051
| Unknown | HISTONE H4 |
AT1G10980 | PredictedPhenotypic Enhancementinterologs mapping | FSW = 0.1374
| Unknown | INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN VACUOLE EXPRESSED IN 8 PLANT STRUCTURES EXPRESSED DURING 6 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G616701) HAS 482 BLAST HITS TO 481 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 255 FUNGI - 99 PLANTS - 97 VIRUSES - 0 OTHER EUKARYOTES - 31 (SOURCE NCBI BLINK) |
AT1G26690 | PredictedPhenotypic Enhancementsynthetic growth defect | FSW = 0.2029
| Unknown | EMP24/GP25L/P24 FAMILY PROTEIN |
AT1G66590 | PredictedPhenotypic EnhancementPhenotypic EnhancementPhenotypic Enhancementtwo hybrid | FSW = 0.2415
| Unknown | COX19 FAMILY PROTEIN |
AT1G72680 | PredictedAffinity Capture-MS | FSW = 0.0119
| Unknown | CINNAMYL-ALCOHOL DEHYDROGENASE PUTATIVE |
AT1G80500 | PredictedReconstituted ComplexReconstituted ComplexAffinity Capture-WesternReconstituted Complexco-fractionationCo-fractionationPhenotypic Enhancement | FSW = 0.1084
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN TRANSPORT ER TO GOLGI VESICLE-MEDIATED TRANSPORT LOCATED IN INTRACELLULAR EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SEDLIN (INTERPROIPR006722) LONGIN-LIKE (INTERPROIPR011012) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G209301) HAS 437 BLAST HITS TO 435 PROTEINS IN 138 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 248 FUNGI - 75 PLANTS - 53 VIRUSES - 0 OTHER EUKARYOTES - 61 (SOURCE NCBI BLINK) |
AT2G19220 | PredictedReconstituted ComplexSynthetic Rescue | FSW = 0.1664
| Unknown | UNKNOWN PROTEIN |
AT2G20290 | PredictedPhenotypic Suppression | FSW = 0.0829
| Unknown | XIG MOTOR/ PROTEIN BINDING |
AT3G01100 | PredictedReconstituted Complexinterologs mapping | FSW = 0.3143
| Unknown | HYP1 (HYPOTHETICAL PROTEIN 1) |
AT3G12200 | PredictedPhenotypic Enhancement | FSW = 0.0970
| Unknown | ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
AT3G53030 | PredictedReconstituted ComplexPhenotypic Enhancement | FSW = 0.1848
| Unknown | SRPK4 (SER/ARG-RICH PROTEIN KINASE 4) KINASE/ PROTEIN KINASE |
AT4G21490 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.3085
| Unknown | NDB3 NADH DEHYDROGENASE |
AT4G29580 | PredictedPhenotypic Enhancementtwo hybridtwo hybridPhenotypic Enhancementinterologs mappingSynthetic Rescue | FSW = 0.3135
| Unknown | CYTIDINE DEAMINASE PUTATIVE / CYTIDINE AMINOHYDROLASE PUTATIVE |
AT1G20693 | PredictedPhenotypic Enhancement | FSW = 0.2704
| Unknown | HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR |
AT1G23460 | PredictedPhenotypic Suppression | FSW = 0.1772
| Unknown | POLYGALACTURONASE |
AT1G29630 | Predictedinterologs mappinginterologs mapping | FSW = 0.1004
| Unknown | NUCLEASE |
AT1G31300 | PredictedPhenotypic Enhancement | FSW = 0.0543
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRAM LAG1 AND CLN8 HOMOLOGY (INTERPROIPR006634) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT4G196452) HAS 478 BLAST HITS TO 478 PROTEINS IN 104 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 269 FUNGI - 98 PLANTS - 80 VIRUSES - 0 OTHER EUKARYOTES - 31 (SOURCE NCBI BLINK) |
AT1G34580 | PredictedAffinity Capture-MS | FSW = 0.0839
| Unknown | MONOSACCHARIDE TRANSPORTER PUTATIVE |
AT1G35350 | PredictedPhenotypic Enhancement | FSW = 0.3114
| Unknown | LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK) |
AT1G44180 | PredictedPhenotypic Enhancement | FSW = 0.2612
| Unknown | AMINOACYLASE PUTATIVE / N-ACYL-L-AMINO-ACID AMIDOHYDROLASE PUTATIVE |
AT1G47830 | PredictedPhenotypic Enhancement | FSW = 0.3183
| Unknown | CLATHRIN COAT ASSEMBLY PROTEIN PUTATIVE |
AT1G75380 | PredictedPhenotypic Enhancement | FSW = 0.1717
| Unknown | WOUND-RESPONSIVE PROTEIN-RELATED |
AT1G78770 | PredictedSynthetic RescueSynthetic RescuePhenotypic Enhancement | FSW = 0.2265
| Unknown | CELL DIVISION CYCLE FAMILY PROTEIN |
AT2G01600 | PredictedPhenotypic Enhancement | FSW = 0.1004
| Unknown | EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN |
AT2G21250 | PredictedPhenotypic Suppression | FSW = 0.0148
| Unknown | MANNOSE 6-PHOSPHATE REDUCTASE (NADPH-DEPENDENT) PUTATIVE |
AT2G23820 | PredictedPhenotypic Enhancement | FSW = 0.0833
| Unknown | METAL-DEPENDENT PHOSPHOHYDROLASE HD DOMAIN-CONTAINING PROTEIN |
AT2G27340 | PredictedPhenotypic Enhancement | FSW = 0.0100
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN CONTAINS INTERPRO DOMAIN/S N-ACETYLGLUCOSAMINYL PHOSPHATIDYLINOSITOL DEACETYLASE (INTERPROIPR003737) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED (TAIRAT3G581302) HAS 325 BLAST HITS TO 323 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 42 METAZOA - 92 FUNGI - 108 PLANTS - 28 VIRUSES - 0 OTHER EUKARYOTES - 55 (SOURCE NCBI BLINK) |
AT2G31020 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0387
| Unknown | ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A) OXYSTEROL BINDING |
AT2G32160 | PredictedPhenotypic Enhancement | FSW = 0.1350
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S N2227-LIKE (INTERPROIPR012901) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G321701) HAS 325 BLAST HITS TO 315 PROTEINS IN 141 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 95 FUNGI - 130 PLANTS - 30 VIRUSES - 0 OTHER EUKARYOTES - 70 (SOURCE NCBI BLINK) |
AT2G48100 | PredictedPhenotypic Suppression | FSW = 0.1546
| Unknown | EXONUCLEASE FAMILY PROTEIN |
AT3G02000 | PredictedPhenotypic Enhancement | FSW = 0.1421
| Unknown | ROXY1 DISULFIDE OXIDOREDUCTASE |
AT3G18660 | PredictedPhenotypic Enhancement | FSW = 0.1665
| Unknown | PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS |
AT3G22290 | PredictedReconstituted ComplexPhenotypic Enhancement | FSW = 0.3837
| Unknown | UNKNOWN PROTEIN |
AT3G25900 | PredictedPhenotypic Enhancement | FSW = 0.2128
| Unknown | HMT-1 HOMOCYSTEINE S-METHYLTRANSFERASE |
AT3G45240 | PredictedPhenotypic Enhancement | FSW = 0.2250
| Unknown | GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1) KINASE |
AT3G47290 | PredictedPhenotypic EnhancementAffinity Capture-WesternPhenotypic EnhancementPhenotypic Suppression | FSW = 0.2404
| Unknown | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
AT3G59540 | PredictedPhenotypic Enhancement | FSW = 0.1824
| Unknown | 60S RIBOSOMAL PROTEIN L38 (RPL38B) |
AT4G13020 | PredictedPhenotypic Suppression | FSW = 0.1538
| Unknown | MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT4G14000 | PredictedPhenotypic Enhancement | FSW = 0.1129
| Unknown | UNKNOWN PROTEIN |
AT4G24160 | PredictedPhenotypic Enhancement | FSW = 0.0843
| Unknown | HYDROLASE ALPHA/BETA FOLD FAMILY PROTEIN |
AT4G27130 | PredictedPhenotypic Enhancement | FSW = 0.3648
| Unknown | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE |
AT5G06600 | PredictedPhenotypic Enhancement | FSW = 0.0506
| Unknown | UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE |
AT5G11500 | PredictedSynthetic Rescueinterologs mappingSynthetic Lethality | FSW = 0.1405
| Unknown | UNKNOWN PROTEIN |
AT5G14060 | PredictedPhenotypic Enhancement | FSW = 0.2310
| Unknown | CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE |
AT5G16170 | PredictedPhenotypic Enhancement | FSW = 0.2081
| Unknown | UNKNOWN PROTEIN |
AT5G16980 | PredictedPhenotypic Enhancement | FSW = 0.3453
| Unknown | NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE |
AT5G17860 | PredictedPhenotypic Enhancement | FSW = 0.3776
| Unknown | CAX7 (CALCIUM EXCHANGER 7) CALCIUMSODIUM ANTIPORTER/ CATIONCATION ANTIPORTER |
AT5G20340 | PredictedPhenotypic Suppressionsynthetic growth defect | FSW = 0.2095
| Unknown | BG5 (BETA-13-GLUCANASE 5) GLUCAN 13-BETA-GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS |
AT5G26250 | PredictedPhenotypic Enhancement | FSW = 0.0549
| Unknown | SUGAR TRANSPORTER PUTATIVE |
AT5G41820 | PredictedAffinity Capture-Western | FSW = 0.0094
| Unknown | GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT-RELATED / RAB GERANYLGERANYLTRANSFERASE ALPHA SUBUNIT-RELATED |
AT5G44830 | PredictedPhenotypic Enhancement | FSW = 0.1709
| Unknown | GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN |
AT5G45620 | PredictedPhenotypic Enhancementsynthetic growth defect | FSW = 0.3477
| Unknown | 26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9) |
AT5G49970 | PredictedPhenotypic Suppression | FSW = 0.2347
| Unknown | ATPPOX (A THALIANA PYRIDOXIN (PYRODOXAMINE) 5-PHOSPHATE OXIDASE) PYRIDOXAMINE-PHOSPHATE OXIDASE |
AT5G60340 | PredictedPhenotypic Enhancement | FSW = 0.0349
| Unknown | MAOC-LIKE DEHYDRATASE DOMAIN-CONTAINING PROTEIN |
AT5G64760 | PredictedPhenotypic Enhancement | FSW = 0.1833
| Unknown | RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B) |
AT5G38820 | PredictedProtein-peptide | FSW = 0.1089
| Unknown | AMINO ACID TRANSPORTER FAMILY PROTEIN |
AT5G47080 | PredictedReconstituted ComplexReconstituted ComplexSynthetic Rescue | FSW = 0.0932
| Unknown | CKB1 PROTEIN KINASE REGULATOR |
AT5G13570 | Predictedinteraction prediction | FSW = 0.0038
| Unknown | DCP2 (DECAPPING 2) HYDROLASE/ M7G(5)PPPN DIPHOSPHATASE/ MRNA BINDING / PROTEIN HOMODIMERIZATION |
AT5G19680 | Predictedinteraction prediction | FSW = 0.0045
| Unknown | LEUCINE-RICH REPEAT FAMILY PROTEIN |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454