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AT4G33090 - ( APM1 (AMINOPEPTIDASE M1) aminopeptidase )

113 Proteins interacs with AT4G33090

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G33210	Predicted Affinity Capture-MS	FSW = 0.0017	Class C: plasma membrane	HSP60-2 (HEAT SHOCK PROTEIN 60-2) ATP BINDING
AT5G12140	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2322	Class C: plasma membrane	ATCYS1 (A THALIANA CYSTATIN-1) CYSTEINE-TYPE ENDOPEPTIDASE INHIBITOR
AT2G34480	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1076	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L18A (RPL18AB)
AT5G60540	Predicted Phenotypic Suppression	FSW = 0.1897	Class C: plasma membrane	PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT3G48930	Predicted biochemical	FSW = 0.0222	Class C: plasma membrane	EMB1080 (EMBRYO DEFECTIVE 1080) STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G35830	Predicted Affinity Capture-MS	FSW = 0.0103	Class C: plasma membrane	ACONITATE HYDRATASE CYTOPLASMIC / CITRATE HYDRO-LYASE / ACONITASE (ACO)
AT5G58640	Predicted Phenotypic Enhancement	FSW = 0.0454	Class C: plasma membrane	SELENOPROTEIN-RELATED
AT1G75170	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Co-purification	FSW = 0.1780	Class C: plasma membrane	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT1G22180	Predicted Affinity Capture-MS	FSW = 0.0417	Class C: plasma membrane	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT1G04750	Predicted Phenotypic Suppression	FSW = 0.1236	Class C: plasma membrane	VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT3G02740	Predicted Phenotypic Enhancement	FSW = 0.0290	Class C: plasma membrane	ASPARTYL PROTEASE FAMILY PROTEIN
AT4G35020	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1155	Class C: plasma membrane	ARAC3 (ARABIDOPSIS RAC-LIKE 3) GTP BINDING / GTPASE
AT1G80050	Predicted Phenotypic Suppression	FSW = 0.1161	Class C: plasma membrane	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) ADENINE PHOSPHORIBOSYLTRANSFERASE/ PHOSPHATE TRANSMEMBRANE TRANSPORTER
AT2G37790	Predicted Synthetic Lethality	FSW = 0.0840	Class C: plasma membrane	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT4G18800	Predicted Phenotypic Enhancement	FSW = 0.0617	Class C: plasma membrane	ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING
AT1G77210	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1697	Class C: plasma membrane	SUGAR TRANSPORTER PUTATIVE
AT4G21680	Predicted Phenotypic Suppression	FSW = 0.1271	Class C: plasma membrane	PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN
AT2G29140	Predicted Affinity Capture-MS	FSW = 0.0839	Class C: plasma membrane	APUM3 (ARABIDOPSIS PUMILIO 3) RNA BINDING / BINDING
AT5G63400	Predicted Affinity Capture-MS	FSW = 0.0521	Unknown	ADK1 (ADENYLATE KINASE 1) ATP BINDING / ADENYLATE KINASE/ NUCLEOBASE NUCLEOSIDE NUCLEOTIDE KINASE/ NUCLEOTIDE KINASE/ PHOSPHOTRANSFERASE PHOSPHATE GROUP AS ACCEPTOR
AT2G05710	Predicted Affinity Capture-MS	FSW = 0.0128	Unknown	ACONITATE HYDRATASE CYTOPLASMIC PUTATIVE / CITRATE HYDRO-LYASE/ACONITASE PUTATIVE
AT3G47520	Predicted Affinity Capture-MS	FSW = 0.0438	Unknown	MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT5G09590	Predicted Phenotypic Suppression	FSW = 0.1319	Unknown	MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT1G20260	Predicted Phenotypic Suppression	FSW = 0.1246	Unknown	HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT3G23990	Predicted Affinity Capture-MS	FSW = 0.0045	Unknown	HSP60 (HEAT SHOCK PROTEIN 60) ATP BINDING
AT4G01320	Predicted Affinity Capture-MS	FSW = 0.1003	Unknown	ATSTE24 ENDOPEPTIDASE/ METALLOENDOPEPTIDASE
AT4G21980	Predicted Phenotypic Suppression	FSW = 0.0714	Unknown	APG8A (AUTOPHAGY 8A) APG8 ACTIVATING ENZYME/ APG8-SPECIFIC PROTEASE/ ATG8 LIGASE
AT1G74560	Predicted Synthetic Lethality	FSW = 0.1206	Unknown	NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING
AT1G55920	Predicted Phenotypic Enhancement	FSW = 0.1107	Unknown	ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE
AT5G51820	Predicted Phenotypic Suppression	FSW = 0.1380	Unknown	PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT2G40400	Predicted Phenotypic Enhancement	FSW = 0.0386	Unknown	UNKNOWN PROTEIN
AT4G38200	Predicted Affinity Capture-MS	FSW = 0.0640	Unknown	GUANINE NUCLEOTIDE EXCHANGE FAMILY PROTEIN
AT1G23740	Predicted Affinity Capture-MS	FSW = 0.0949	Unknown	OXIDOREDUCTASE ZINC-BINDING DEHYDROGENASE FAMILY PROTEIN
AT4G30950	Predicted Affinity Capture-MS	FSW = 0.0636	Unknown	FAD6 (FATTY ACID DESATURASE 6) OMEGA-6 FATTY ACID DESATURASE
AT2G30390	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS two hybrid	FSW = 0.1840	Unknown	FC2 (FERROCHELATASE 2) FERROCHELATASE
AT3G54670	Predicted Phenotypic Enhancement	FSW = 0.0928	Unknown	TTN8 (TITAN8) ATP BINDING / TRANSPORTER
AT1G07180	Predicted Affinity Capture-MS	FSW = 0.0618	Unknown	NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1) NADH DEHYDROGENASE
AT4G28220	Predicted Affinity Capture-MS	FSW = 0.1041	Unknown	NDB1 (NAD(P)H DEHYDROGENASE B1) NADH DEHYDROGENASE/ DISULFIDE OXIDOREDUCTASE
AT3G09680	Predicted Affinity Capture-MS	FSW = 0.0256	Unknown	40S RIBOSOMAL PROTEIN S23 (RPS23A)
AT2G47620	Predicted Affinity Capture-MS	FSW = 0.0200	Unknown	ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING
AT1G56110	Predicted Phenotypic Enhancement	FSW = 0.0176	Unknown	NOP56 (ARABIDOPSIS HOMOLOG OF NUCLEOLAR PROTEIN NOP56)
AT2G40290	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.1070	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 PUTATIVE / EIF-2A PUTATIVE / EIF-2-ALPHA PUTATIVE
AT4G36590	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1610	Unknown	MADS-BOX PROTEIN (AGL40)
AT1G08620	Predicted Affinity Capture-MS	FSW = 0.0308	Unknown	TRANSCRIPTION FACTOR
AT1G28460	Predicted Phenotypic Enhancement	FSW = 0.0602	Unknown	AGL59 (AGAMOUS-LIKE 59) DNA BINDING / TRANSCRIPTION FACTOR
AT2G41380	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0300	Unknown	EMBRYO-ABUNDANT PROTEIN-RELATED
AT5G47630	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1246	Unknown	MTACP3 (MITOCHONDRIAL ACYL CARRIER PROTEIN 3) ACYL CARRIER/ COFACTOR BINDING
AT1G53240	Predicted Affinity Capture-MS	FSW = 0.0187	Unknown	MALATE DEHYDROGENASE (NAD) MITOCHONDRIAL
AT3G49920	Predicted Phenotypic Suppression	FSW = 0.1225	Unknown	VDAC5 (VOLTAGE DEPENDENT ANION CHANNEL 5) VOLTAGE-GATED ANION CHANNEL
AT2G19980	Predicted Phenotypic Suppression	FSW = 0.1528	Unknown	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT4G33710	Predicted Phenotypic Enhancement	FSW = 0.0940	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT1G50060	Predicted Affinity Capture-MS	FSW = 0.0850	Unknown	PATHOGENESIS-RELATED PROTEIN PUTATIVE
AT3G54840	Predicted Phenotypic Suppression	FSW = 0.1620	Unknown	ARA6 GTP BINDING / GTPASE
AT5G18380	Predicted two hybrid	FSW = 0.0055	Unknown	40S RIBOSOMAL PROTEIN S16 (RPS16C)
AT1G79650	Predicted Affinity Capture-MS	FSW = 0.0205	Unknown	RAD23 DAMAGED DNA BINDING
AT3G60360	Predicted Synthetic Lethality	FSW = 0.1103	Unknown	EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14)
AT1G62800	Predicted Phenotypic Enhancement	FSW = 0.1390	Unknown	ASP4 (ASPARTATE AMINOTRANSFERASE 4) CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE/ TRANSFERASE TRANSFERRING NITROGENOUS GROUPS
AT5G49060	Predicted Phenotypic Enhancement	FSW = 0.0414	Unknown	DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN
AT4G17190	Predicted Phenotypic Suppression	FSW = 0.0929	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT3G27180	Predicted two hybrid	FSW = 0.0230	Unknown	UNKNOWN PROTEIN
AT1G10600	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1789	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN UBIQUITIN-DEPENDENT PROTEIN CATABOLIC PROCESS LOCATED IN CHLOROPLAST EXPRESSED IN CULTURED CELL CONTAINS INTERPRO DOMAIN/S MOV34/MPN/PAD-1 (INTERPROIPR000555) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT4G161441) HAS 753 BLAST HITS TO 752 PROTEINS IN 167 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 359 FUNGI - 199 PLANTS - 115 VIRUSES - 0 OTHER EUKARYOTES - 80 (SOURCE NCBI BLINK)
AT1G22240	Predicted interologs mapping	FSW = 0.0100	Unknown	APUM8 (ARABIDOPSIS PUMILIO 8) RNA BINDING / BINDING
AT1G23460	Predicted Phenotypic Enhancement	FSW = 0.1467	Unknown	POLYGALACTURONASE
AT1G27320	Predicted Phenotypic Enhancement	FSW = 0.1076	Unknown	AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) CYTOKININ RECEPTOR/ OSMOSENSOR/ PROTEIN HISTIDINE KINASE
AT1G31170	Predicted Phenotypic Enhancement	FSW = 0.0557	Unknown	SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS
AT1G47830	Predicted Phenotypic Enhancement	FSW = 0.0674	Unknown	CLATHRIN COAT ASSEMBLY PROTEIN PUTATIVE
AT1G52500	Predicted Phenotypic Suppression	FSW = 0.0968	Unknown	ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE
AT1G60680	Predicted Phenotypic Enhancement	FSW = 0.0652	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G66740	Predicted Phenotypic Enhancement	FSW = 0.0089	Unknown	SGA2
AT2G31260	Predicted Phenotypic Enhancement	FSW = 0.1504	Unknown	APG9 (AUTOPHAGY 9)
AT2G34750	Predicted Phenotypic Enhancement	FSW = 0.1155	Unknown	RNA POLYMERASE I SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3 FAMILY PROTEIN
AT2G48100	Predicted Phenotypic Suppression	FSW = 0.1589	Unknown	EXONUCLEASE FAMILY PROTEIN
AT3G02000	Predicted Phenotypic Enhancement	FSW = 0.1188	Unknown	ROXY1 DISULFIDE OXIDOREDUCTASE
AT3G06483	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.0832	Unknown	PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE
AT3G11230	Predicted Synthetic Lethality Phenotypic Enhancement Synthetic Lethality	FSW = 0.1650	Unknown	YIPPEE FAMILY PROTEIN
AT3G12200	Predicted Phenotypic Enhancement	FSW = 0.0873	Unknown	ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G24495	Predicted Phenotypic Enhancement	FSW = 0.0311	Unknown	MSH7 (MUTS HOMOLOG 7) ATP BINDING / DAMAGED DNA BINDING / MISMATCHED DNA BINDING
AT3G30842	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western	FSW = 0.0823	Unknown	PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G60860	Predicted Affinity Capture-MS	FSW = 0.0450	Unknown	GUANINE NUCLEOTIDE EXCHANGE FAMILY PROTEIN
AT4G21480	Predicted Phenotypic Enhancement	FSW = 0.0525	Unknown	CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT4G30000	Predicted Affinity Capture-MS	FSW = 0.0308	Unknown	DIHYDROPTERIN PYROPHOSPHOKINASE PUTATIVE / DIHYDROPTEROATE SYNTHASE PUTATIVE / DHPS PUTATIVE
AT1G09270	Predicted Phenotypic Enhancement	FSW = 0.0466	Unknown	IMPA-4 (IMPORTIN ALPHA ISOFORM 4) BINDING / PROTEIN TRANSPORTER
AT1G20693	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1668	Unknown	HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G21370	Predicted Phenotypic Suppression	FSW = 0.0600	Unknown	UNKNOWN PROTEIN
AT1G27040	Predicted Phenotypic Suppression	FSW = 0.0372	Unknown	NITRATE TRANSPORTER PUTATIVE
AT1G29970	Predicted Phenotypic Enhancement	FSW = 0.0930	Unknown	RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)
AT1G43080	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.2134	Unknown	GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN
AT1G55300	Predicted Phenotypic Enhancement	FSW = 0.0913	Unknown	TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G78770	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0886	Unknown	CELL DIVISION CYCLE FAMILY PROTEIN
AT2G31020	Predicted Affinity Capture-MS	FSW = 0.0289	Unknown	ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A) OXYSTEROL BINDING
AT2G38600	Predicted Phenotypic Enhancement	FSW = 0.0599	Unknown	ACID PHOSPHATASE CLASS B FAMILY PROTEIN
AT2G47970	Predicted Affinity Capture-MS	FSW = 0.1382	Unknown	NPL4 FAMILY PROTEIN
AT3G11290	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.1133	Unknown	UNKNOWN PROTEIN
AT3G18660	Predicted Affinity Capture-MS Affinity Capture-MS Phenotypic Enhancement synthetic growth defect	FSW = 0.2392	Unknown	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G59540	Predicted Phenotypic Suppression	FSW = 0.1612	Unknown	60S RIBOSOMAL PROTEIN L38 (RPL38B)
AT4G03430	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0189	Unknown	EMB2770 (EMBRYO DEFECTIVE 2770) RNA SPLICING FACTOR TRANSESTERIFICATION MECHANISM
AT4G27130	Predicted Phenotypic Enhancement	FSW = 0.1636	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT5G01640	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0456	Unknown	PRA1B5 (PRENYLATED RAB ACCEPTOR 1B5)
AT5G09390	Predicted Affinity Capture-MS	FSW = 0.0068	Unknown	CD2-BINDING PROTEIN-RELATED
AT5G13700	Predicted Phenotypic Suppression	FSW = 0.0444	Unknown	ATPAO1 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 1) FAD BINDING / POLYAMINE OXIDASE
AT5G38890	Predicted Phenotypic Enhancement	FSW = 0.0225	Unknown	EXORIBONUCLEASE-RELATED
AT5G46150	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0074	Unknown	LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT5G59440	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1610	Unknown	ZEU1 (ZEUS1) ATP BINDING / THYMIDYLATE KINASE
AT5G66640	Predicted biochemical	FSW = 0.0122	Unknown	DAR3 (DA1-RELATED PROTEIN 3)
AT5G01770	Predicted Phenotypic Enhancement	FSW = 0.1078	Unknown	RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING
AT5G06620	Predicted Affinity Capture-MS	FSW = 0.0623	Unknown	SDG38 (SET DOMAIN PROTEIN 38)
AT5G24410	Predicted Affinity Capture-MS	FSW = 0.0446	Unknown	GLUCOSAMINE/GALACTOSAMINE-6-PHOSPHATE ISOMERASE-RELATED
AT5G44635	Predicted Affinity Capture-MS	FSW = 0.0270	Unknown	MINICHROMOSOME MAINTENANCE FAMILY PROTEIN / MCM FAMILY PROTEIN
AT5G61010	Predicted Phenotypic Enhancement	FSW = 0.0576	Unknown	ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2) PROTEIN BINDING
AT3G05480	Predicted Reconstituted Complex Affinity Capture-Western	FSW = 0.0069	Unknown	RAD9
AT1G26665	Predicted two hybrid	FSW = 0.0220	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS RNA POLYMERASE II MEDIATOR COMPLEX PROTEIN-RELATED (TAIRAT5G419101) HAS 223 BLAST HITS TO 223 PROTEINS IN 105 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 112 FUNGI - 83 PLANTS - 24 VIRUSES - 0 OTHER EUKARYOTES - 4 (SOURCE NCBI BLINK)
AT1G09460	Predicted two hybrid	FSW = 0.0023	Unknown	GLUCAN ENDO-13-BETA-GLUCOSIDASE-RELATED
AT5G41910	Predicted interaction prediction	FSW = 0.0083	Unknown	RNA POLYMERASE II MEDIATOR COMPLEX PROTEIN-RELATED
AT1G26450	Predicted interaction prediction	FSW = 0.0075	Unknown	BETA-13-GLUCANASE-RELATED

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Proteins

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT4G33090 - ( APM1 (AMINOPEPTIDASE M1) aminopeptidase )

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