Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT4G03430 - ( EMB2770 (EMBRYO DEFECTIVE 2770) RNA splicing factor transesterification mechanism )

102 Proteins interacs with AT4G03430
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT1G23190

Predicted

Affinity Capture-MS

FSW = 0.0300

Unknown

PHOSPHOGLUCOMUTASE CYTOPLASMIC PUTATIVE / GLUCOSE PHOSPHOMUTASE PUTATIVE
AT3G47520

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0100

Unknown

MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT3G07590

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2978

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN D1 PUTATIVE / SNRNP CORE PROTEIN D1 PUTATIVE / SM PROTEIN D1 PUTATIVE
AT4G02840

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

interaction prediction

FSW = 0.3469

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN D1 PUTATIVE / SNRNP CORE PROTEIN D1 PUTATIVE / SM PROTEIN D1 PUTATIVE
AT5G55400

Predicted

Affinity Capture-MS

FSW = 0.0171

Unknown

FIMBRIN-LIKE PROTEIN PUTATIVE
AT1G20960

Predicted

Co-purification

Co-purification

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Synthetic Lethality

interaction prediction

FSW = 0.4055

Unknown

EMB1507 (EMBRYO DEFECTIVE 1507) ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT4G01370

Predicted

biochemical

FSW = 0.0015

Unknown

ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4) MAP KINASE/ KINASE
AT3G52140Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0077

Unknown

TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN
AT3G09820

Predicted

Affinity Capture-MS

FSW = 0.0132

Unknown

ADK1 (ADENOSINE KINASE 1) ADENOSINE KINASE/ COPPER ION BINDING
AT5G36880

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0089

Unknown

ACETYL-COA SYNTHETASE PUTATIVE / ACETATE-COA LIGASE PUTATIVE
AT1G09760

Predicted

Affinity Capture-MS

FSW = 0.2911

Unknown

U2A (U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A) PROTEIN BINDING
AT1G09770

Predicted

Co-purification

FSW = 0.2758

Unknown

ATCDC5 (ARABIDOPSIS THALIANA CELL DIVISION CYCLE 5) DNA BINDING / TRANSCRIPTION FACTOR
AT5G64270

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2395

Unknown

SPLICING FACTOR PUTATIVE
AT5G65780

Predicted

Affinity Capture-MS

FSW = 0.0350

Unknown

ATBCAT-5 BRANCHED-CHAIN-AMINO-ACID TRANSAMINASE/ CATALYTIC
AT1G50200

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0152

Unknown

ALATS (ALANYL-TRNA SYNTHETASE) ATP BINDING / ALANINE-TRNA LIGASE/ LIGASE FORMING AMINOACYL-TRNA AND RELATED COMPOUNDS / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT1G74260

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0102

Unknown

PUR4 (PURINE BIOSYNTHESIS 4) ATP BINDING / CATALYTIC/ PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE
AT1G14810

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0095

Unknown

SEMIALDEHYDE DEHYDROGENASE FAMILY PROTEIN
AT1G80070

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

in vivo

Affinity Capture-MS

Synthetic Lethality

interaction prediction

FSW = 0.4177

Unknown

SUS2 (ABNORMAL SUSPENSOR 2)
AT2G28190

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0023

Unknown

CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2) SUPEROXIDE DISMUTASE
AT5G51820

Predicted

Affinity Capture-MS

FSW = 0.0096

Unknown

PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT3G57050

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0087

Unknown

CBL (CYSTATHIONINE BETA-LYASE) CYSTATHIONINE BETA-LYASE
AT4G35460

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0512

Unknown

NTRB (NADPH-DEPENDENT THIOREDOXIN REDUCTASE B) THIOREDOXIN-DISULFIDE REDUCTASE
AT3G29320

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0179

Unknown

GLUCAN PHOSPHORYLASE PUTATIVE
AT2G33340

Predicted

Affinity Capture-MS

Co-purification

FSW = 0.2276

Unknown

NUCLEOTIDE BINDING / UBIQUITIN-PROTEIN LIGASE
AT3G58510

Predicted

Affinity Capture-MS

FSW = 0.0179

Unknown

DEAD BOX RNA HELICASE PUTATIVE (RH11)
AT5G48230

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0212

Unknown

ACAT2 (ACETOACETYL-COA THIOLASE 2) ACETYL-COA C-ACETYLTRANSFERASE/ CATALYTIC
AT1G70730

Predicted

interaction prediction

FSW = 0.0214

Unknown

PHOSPHOGLUCOMUTASE CYTOPLASMIC PUTATIVE / GLUCOSE PHOSPHOMUTASE PUTATIVE
AT1G50480

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0148

Unknown

THFS (10-FORMYLTETRAHYDROFOLATE SYNTHETASE) ATP BINDING / COPPER ION BINDING / FORMATE-TETRAHYDROFOLATE LIGASE
AT2G30110

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0146

Unknown

ATUBA1 UBIQUITIN ACTIVATING ENZYME/ UBIQUITIN-PROTEIN LIGASE
AT4G11380

Predicted

two hybrid

two hybrid

FSW = 0.0031

Unknown

BETA-ADAPTIN PUTATIVE
AT4G33090

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0189

Unknown

APM1 (AMINOPEPTIDASE M1) AMINOPEPTIDASE
AT5G03300

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0206

Unknown

ADK2 (ADENOSINE KINASE 2) ADENOSINE KINASE/ COPPER ION BINDING / KINASE
AT1G06220

Predicted

in vivo

Affinity Capture-MS

FSW = 0.1153

Unknown

MEE5 (MATERNAL EFFECT EMBRYO ARREST 5) GTP BINDING / GTPASE/ TRANSLATION ELONGATION FACTOR/ TRANSLATION FACTOR NUCLEIC ACID BINDING
AT2G37790

Predicted

interaction prediction

FSW = 0.0188

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT2G17420

Predicted

Affinity Capture-MS

FSW = 0.0509

Unknown

NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A) THIOREDOXIN-DISULFIDE REDUCTASE
AT5G08290

Predicted

interaction prediction

two hybrid

Affinity Capture-MS

two hybrid

Affinity Capture-MS

FSW = 0.4346

Unknown

YLS8 CATALYTIC
AT1G16610

Predicted

Affinity Capture-MS

FSW = 0.0508

Unknown

SR45 RNA BINDING / PROTEIN BINDING
AT5G12190

Predicted

Affinity Capture-MS

FSW = 0.0204

Unknown

RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT2G47640

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2926

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN D2 PUTATIVE / SNRNP CORE PROTEIN D2 PUTATIVE / SM PROTEIN D2 PUTATIVE
AT2G41500

Predicted

Co-purification

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

interaction prediction

FSW = 0.3865

Unknown

EMB2776 NUCLEOTIDE BINDING
AT5G37720

Predicted

Affinity Capture-MS

FSW = 0.0200

Unknown

RNA AND EXPORT FACTOR-BINDING PROTEIN PUTATIVE
AT2G43810

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.1113

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN F PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE / SM PROTEIN F PUTATIVE
AT1G19120

Predicted

Affinity Capture-MS

FSW = 0.1170

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT2G03870

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

interaction prediction

FSW = 0.1436

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT4G30220

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

interaction prediction

FSW = 0.3371

Unknown

RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F)
AT2G23930

Predicted

Affinity Capture-MS

FSW = 0.3279

Unknown

SNRNP-G (PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G)
AT5G27720

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2346

Unknown

EMB1644 (EMBRYO DEFECTIVE 1644)
AT1G76300

Predicted

Affinity Capture-MS

FSW = 0.0429

Unknown

SMD3 (SNRNP CORE PROTEIN SMD3)
AT3G11500

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.2903

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN G PUTATIVE / SNRNP-G PUTATIVE / SM PROTEIN G PUTATIVE
AT5G44500

Predicted

Affinity Capture-MS

FSW = 0.0134

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT1G20580

Predicted

Affinity Capture-MS

Affinity Capture-MS

interaction prediction

FSW = 0.3902

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT1G28060

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

interaction prediction

FSW = 0.3520

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN FAMILY PROTEIN / SNRNP FAMILY PROTEIN
AT1G04510

Predicted

Co-purification

FSW = 0.2165

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G03330

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2816

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN D PUTATIVE / SNRNP CORE SM-LIKE PROTEIN PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE
AT1G76860

Predicted

Affinity Capture-MS

FSW = 0.2152

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT4G30330

Predicted

Affinity Capture-MS

Affinity Capture-MS

interaction prediction

FSW = 0.2994

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN E PUTATIVE / SNRNP-E PUTATIVE / SM PROTEIN E PUTATIVE
AT2G18740

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2768

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN E PUTATIVE / SNRNP-E PUTATIVE / SM PROTEIN E PUTATIVE
AT1G21190

Predicted

Affinity Capture-MS

FSW = 0.1976

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT5G25230

Predicted

in vivo

FSW = 0.0870

Unknown

ELONGATION FACTOR TU FAMILY PROTEIN
AT5G48870

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

interaction prediction

FSW = 0.1575

Unknown

SAD1 (SUPERSENSITIVE TO ABA AND DROUGHT 1) RNA BINDING
AT1G29880

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0189

Unknown

GLYCYL-TRNA SYNTHETASE / GLYCINE--TRNA LIGASE
AT5G47770

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0206

Unknown

FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G10060

Predicted

Affinity Capture-MS

FSW = 0.0244

Unknown

BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE 1 / BRANCHED-CHAIN AMINO ACID TRANSAMINASE 1 (BCAT1)
AT1G53240

Predicted

Affinity Capture-MS

FSW = 0.0309

Unknown

MALATE DEHYDROGENASE (NAD) MITOCHONDRIAL
AT2G04750

Predicted

Affinity Capture-MS

FSW = 0.0257

Unknown

FIMBRIN-LIKE PROTEIN PUTATIVE
AT4G31180

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0131

Unknown

ASPARTYL-TRNA SYNTHETASE PUTATIVE / ASPARTATE--TRNA LIGASE PUTATIVE
AT5G47720

Predicted

Affinity Capture-MS

FSW = 0.0186

Unknown

ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE
AT3G25840

Predicted

two hybrid

synthetic growth defect

Synthetic Lethality

biochemical

FSW = 0.0661

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT3G11710

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0285

Unknown

ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1) ATP BINDING / AMINOACYL-TRNA LIGASE/ LYSINE-TRNA LIGASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT4G17190

Predicted

Affinity Capture-MS

FSW = 0.0170

Unknown

FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G08830

Predicted

Affinity Capture-MS

FSW = 0.0039

Unknown

CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1) SUPEROXIDE DISMUTASE
AT2G43770

Predicted

Affinity Capture-MS

in vivo

Affinity Capture-MS

FSW = 0.0863

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G24730

Predicted

two hybrid

Affinity Capture-Western

Reconstituted Complex

FSW = 0.0566

Unknown

CATALYTIC
AT5G09390

Predicted

Affinity Capture-MS

FSW = 0.0412

Unknown

CD2-BINDING PROTEIN-RELATED
AT4G38780

Predicted

in vivo

FSW = 0.0870

Unknown

SPLICING FACTOR PUTATIVE
AT1G14640

Predicted

Affinity Capture-MS

FSW = 0.3038

Unknown

SWAP (SUPPRESSOR-OF-WHITE-APRICOT)/SURP DOMAIN-CONTAINING PROTEIN
AT1G17070

Predicted

Affinity Capture-MS

FSW = 0.1565

Unknown

D111/G-PATCH DOMAIN-CONTAINING PROTEIN
AT1G30580

Predicted

Affinity Capture-MS

FSW = 0.0081

Unknown

GTP BINDING
AT1G49760

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0571

Unknown

PAB8 (POLY(A) BINDING PROTEIN 8) RNA BINDING / TRANSLATION INITIATION FACTOR
AT1G60170

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

two hybrid

interaction prediction

FSW = 0.4604

Unknown

EMB1220 (EMBRYO DEFECTIVE 1220)
AT1G67070

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0095

Unknown

DIN9 (DARK INDUCIBLE 9) MANNOSE-6-PHOSPHATE ISOMERASE
AT1G78580

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0181

Unknown

ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE) ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT2G32600

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2212

Unknown

HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN
AT2G37770

Predicted

Affinity Capture-MS

FSW = 0.0249

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT3G05760

Predicted

Affinity Capture-MS

FSW = 0.1843

Unknown

NUCLEIC ACID BINDING / ZINC ION BINDING
AT3G55220

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2955

Unknown

SPLICING FACTOR PUTATIVE
AT3G57870

Predicted

two hybrid

interaction prediction

FSW = 0.0045

Unknown

SCE1 (SUMO CONJUGATION ENZYME 1) SUMO LIGASE
AT4G00660

Predicted

Affinity Capture-MS

FSW = 0.0925

Unknown

DEAD/DEAH BOX HELICASE PUTATIVE
AT1G66510

Predicted

Affinity Capture-MS

FSW = 0.1311

Unknown

AAR2 PROTEIN FAMILY
AT3G59410

Predicted

Affinity Capture-MS

Affinity Capture-MS

interaction prediction

FSW = 0.0441

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT4G10320

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0073

Unknown

ISOLEUCYL-TRNA SYNTHETASE PUTATIVE / ISOLEUCINE--TRNA LIGASE PUTATIVE
AT4G21660

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.3261

Unknown

PROLINE-RICH SPLICEOSOME-ASSOCIATED (PSP) FAMILY PROTEIN
AT4G31120

Predicted

Affinity Capture-MS

interaction prediction

FSW = 0.0356

Unknown

SKB1 (SHK1 BINDING PROTEIN 1) PROTEIN METHYLTRANSFERASE
AT5G06160

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2840

Unknown

ATO (ATROPOS) NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G46400

Predicted

Affinity Capture-MS

FSW = 0.2408

Unknown

PRP39-2
AT1G14650

Predicted

Affinity Capture-MS

FSW = 0.0712

Unknown

SWAP (SUPPRESSOR-OF-WHITE-APRICOT)/SURP DOMAIN-CONTAINING PROTEIN / UBIQUITIN FAMILY PROTEIN
AT4G26870

Predicted

Affinity Capture-MS

FSW = 0.0179

Unknown

ASPARTYL-TRNA SYNTHETASE PUTATIVE / ASPARTATE--TRNA LIGASE PUTATIVE
AT1G22760

Predicted

Affinity Capture-MS

FSW = 0.0574

Unknown

PAB3 (POLY(A) BINDING PROTEIN 3) RNA BINDING / TRANSLATION INITIATION FACTOR
AT2G37760

Predicted

Affinity Capture-MS

FSW = 0.0228

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G16980

Predicted

Affinity Capture-MS

FSW = 0.0162

Unknown

ATTPS2 ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT5G35700

Predicted

interaction prediction

FSW = 0.0386

Unknown

FIM2 (FIMBRIN-LIKE PROTEIN 2) ACTIN BINDING
AT1G50090

Predicted

interaction prediction

FSW = 0.0374

Unknown

AMINOTRANSFERASE CLASS IV FAMILY PROTEIN

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454