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AT1G66740 - ( SGA2 )

174 Proteins interacs with AT1G66740

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT1G07660	Predicted Affinity Capture-MS Synthetic Lethality	FSW = 0.1122	Unknown	HISTONE H4
AT2G20450	Predicted two hybrid	FSW = 0.0046	Unknown	60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT2G38020	Predicted synthetic growth defect	FSW = 0.0587	Unknown	VCL1 (VACUOLELESS 1)
AT2G06510	Predicted Affinity Capture-MS	FSW = 0.0850	Unknown	RPA1A (REPLICATION PROTEIN A 1A) DNA BINDING / NUCLEIC ACID BINDING
AT5G20930	Predicted Affinity Capture-MS	FSW = 0.0060	Unknown	TSL (TOUSLED) KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G59690	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Synthetic Lethality Co-purification Phenotypic Enhancement Reconstituted Complex	FSW = 0.1536	Unknown	HISTONE H4
AT5G43530	Predicted synthetic growth defect	FSW = 0.1536	Unknown	SNF2 DOMAIN-CONTAINING PROTEIN / HELICASE DOMAIN-CONTAINING PROTEIN / RING FINGER DOMAIN-CONTAINING PROTEIN
AT1G55920	Predicted Phenotypic Enhancement	FSW = 0.0133	Unknown	ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE
AT3G11630	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1769	Unknown	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT1G18640	Predicted Affinity Capture-MS	FSW = 0.0518	Unknown	PSP (3-PHOSPHOSERINE PHOSPHATASE) PHOSPHOSERINE PHOSPHATASE
AT1G56050	Predicted Phenotypic Enhancement	FSW = 0.0285	Unknown	GTP-BINDING PROTEIN-RELATED
AT1G19660	Predicted Synthetic Lethality	FSW = 0.0020	Unknown	WOUND-RESPONSIVE FAMILY PROTEIN
AT4G23430	Predicted Synthetic Lethality	FSW = 0.0120	Unknown	SHORT-CHAIN DEHYDROGENASE/REDUCTASE (SDR) FAMILY PROTEIN
AT4G01690	Predicted Synthetic Lethality	FSW = 0.1284	Unknown	PPOX PROTOPORPHYRINOGEN OXIDASE
AT3G54670	Predicted Phenotypic Enhancement	FSW = 0.0695	Unknown	TTN8 (TITAN8) ATP BINDING / TRANSPORTER
AT1G12520	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2451	Unknown	ATCCS (COPPER CHAPERONE FOR SOD1) SUPEROXIDE DISMUTASE/ SUPEROXIDE DISMUTASE COPPER CHAPERONE
AT5G63110	Predicted synthetic growth defect	FSW = 0.1794	Unknown	HDA6 (HISTONE DEACETYLASE 6) HISTONE DEACETYLASE
AT5G58230	Predicted Affinity Capture-MS Phenotypic Enhancement	FSW = 0.1184	Unknown	MSI1 (MULTICOPY SUPRESSOR OF IRA1) PROTEIN BINDING
ATCG01240	Predicted Affinity Capture-MS	FSW = 0.0027	Unknown	30S CHLOROPLAST RIBOSOMAL PROTEIN S7
AT1G11890	Predicted Phenotypic Enhancement	FSW = 0.1138	Unknown	SEC22 TRANSPORTER
AT1G07670	Predicted Synthetic Lethality	FSW = 0.0479	Unknown	CALCIUM-TRANSPORTING ATPASE
AT3G45780	Predicted Affinity Capture-MS	FSW = 0.0420	Unknown	PHOT1 (PHOTOTROPIN 1) FMN BINDING / BLUE LIGHT PHOTORECEPTOR/ KINASE/ PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE
AT4G04720	Predicted Affinity Capture-MS	FSW = 0.0061	Unknown	CPK21 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT2G32670	Predicted Phenotypic Enhancement	FSW = 0.0200	Unknown	ATVAMP725
AT1G32090	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Co-purification Reconstituted Complex	FSW = 0.0803	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT5G26340	Predicted Affinity Capture-MS two hybrid Affinity Capture-MS	FSW = 0.0134	Unknown	MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT4G29360	Predicted Co-purification Affinity Capture-MS	FSW = 0.0546	Unknown	GLYCOSYL HYDROLASE FAMILY 17 PROTEIN
AT3G18524	Predicted Phenotypic Suppression	FSW = 0.1011	Unknown	MSH2 (MUTS HOMOLOG 2) ATP BINDING / DAMAGED DNA BINDING / MISMATCHED DNA BINDING / PROTEIN BINDING
AT3G43810	Predicted Affinity Capture-MS	FSW = 0.0048	Unknown	CAM7 (CALMODULIN 7) CALCIUM ION BINDING
AT1G66410	Predicted Affinity Capture-MS	FSW = 0.0028	Unknown	CAM4 (CALMODULIN 4) CALCIUM ION BINDING / SIGNAL TRANSDUCER
AT4G33090	Predicted Phenotypic Enhancement	FSW = 0.0089	Unknown	APM1 (AMINOPEPTIDASE M1) AMINOPEPTIDASE
AT5G48880	Predicted Co-purification	FSW = 0.0378	Unknown	PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2) ACETYL-COA C-ACYLTRANSFERASE/ CATALYTIC
AT5G19180	Predicted Phenotypic Suppression	FSW = 0.0326	Unknown	ECR1 (E1 C-TERMINAL RELATED 1) NEDD8 ACTIVATING ENZYME/ PROTEIN HETERODIMERIZATION/ SMALL PROTEIN ACTIVATING ENZYME
AT2G44680	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1369	Unknown	CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE
AT4G26720	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1039	Unknown	PPX1 (PROTEIN PHOSPHATASE X 1) PROTEIN SERINE/THREONINE PHOSPHATASE
AT4G05190	Predicted Synthetic Lethality Co-expression	FSW = 0.0680	Unknown	ATK5 (ARABIDOPSIS THALIANA KINESIN 5) MICROTUBULE MOTOR
AT5G19310	Predicted Phenotypic Enhancement Phenotypic Suppression Phenotypic Enhancement	FSW = 0.0547	Unknown	HOMEOTIC GENE REGULATOR PUTATIVE
AT4G34430	Predicted Phenotypic Suppression	FSW = 0.0113	Unknown	CHB3 DNA BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT1G17790	Predicted Synthetic Lethality Affinity Capture-Western	FSW = 0.1368	Unknown	DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN
AT3G54610	Predicted Synthetic Lethality	FSW = 0.1170	Unknown	GCN5 DNA BINDING / H3 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE
AT1G21690	Predicted Affinity Capture-Western	FSW = 0.0751	Unknown	EMB1968 (EMBRYO DEFECTIVE 1968) ATP BINDING / ATPASE/ DNA BINDING / DNA CLAMP LOADER/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G12810	Predicted synthetic growth defect	FSW = 0.2094	Unknown	PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT3G13445	Predicted Affinity Capture-Western interologs mapping	FSW = 0.0642	Unknown	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT3G44530	Predicted two hybrid Reconstituted Complex Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Phenotypic Enhancement interaction prediction	FSW = 0.2608	Unknown	HIRA (ARABIDOPSIS HOMOLOG OF HISTONE CHAPERONE HIRA) NUCLEOTIDE BINDING / PROTEIN BINDING
AT1G02680	Predicted interologs mapping	FSW = 0.1351	Unknown	TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT2G43810	Predicted Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.1864	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN F PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE / SM PROTEIN F PUTATIVE
AT5G64630	Predicted synthetic growth defect Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement in vivo Phenotypic Enhancement Phenotypic Enhancement Affinity Capture-MS	FSW = 0.1437	Unknown	FAS2 (FASCIATA 2) NUCLEOTIDE BINDING / PROTEIN BINDING
AT1G19120	Predicted Synthetic Lethality	FSW = 0.1810	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT2G03870	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1971	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT3G06010	Predicted Phenotypic Enhancement	FSW = 0.0570	Unknown	ATCHR12 ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT4G09800	Predicted Phenotypic Enhancement	FSW = 0.0096	Unknown	RPS18C (S18 RIBOSOMAL PROTEIN) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G72050	Predicted Phenotypic Enhancement	FSW = 0.0269	Unknown	TFIIIA (TRANSCRIPTION FACTOR IIIA) 5S RDNA BINDING / 5S RRNA BINDING / NUCLEIC ACID BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT3G01770	Predicted Affinity Capture-Western	FSW = 0.0210	Unknown	ATBET10 (ARABIDOPSIS THALIANA BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 10) DNA BINDING
AT4G38130	Predicted synthetic growth defect	FSW = 0.1016	Unknown	HD1 (HISTONE DEACETYLASE 1) BASAL TRANSCRIPTION REPRESSOR/ HISTONE DEACETYLASE/ PROTEIN BINDING
AT1G02740	Predicted Phenotypic Enhancement	FSW = 0.1063	Unknown	CHROMATIN BINDING
AT5G22750	Predicted synthetic growth defect	FSW = 0.1364	Unknown	RAD5 ATP BINDING / ATP-DEPENDENT HELICASE/ DNA BINDING / HELICASE/ HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT2G26150	Predicted synthetic growth defect	FSW = 0.0965	Unknown	ATHSFA2 DNA BINDING / TRANSCRIPTION FACTOR
AT1G07370	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.3199	Unknown	PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN) DNA BINDING / DNA POLYMERASE PROCESSIVITY FACTOR/ PROTEIN BINDING
AT1G65470	Predicted Synthetic Rescue Synthetic Lethality synthetic growth defect synthetic growth defect synthetic growth defect Phenotypic Enhancement Phenotypic Enhancement synthetic growth defect synthetic growth defect Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1996	Unknown	FAS1 (FASCIATA 1) HISTONE BINDING
AT2G38560	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1883	Unknown	TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION ELONGATION FACTOR/ TRANSCRIPTION FACTOR
AT3G19210	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.3309	Unknown	ATRAD54 (ARABIDOPSIS HOMOLOG OF RAD54) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT4G18880	Predicted Affinity Capture-MS	FSW = 0.0123	Unknown	AT-HSFA4A DNA BINDING / TRANSCRIPTION FACTOR
AT2G36740	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1783	Unknown	SWC2 DNA BINDING / TRANSCRIPTION FACTOR
AT1G55520	Predicted Affinity Capture-Western interologs mapping	FSW = 0.0636	Unknown	TBP2 (TATA BINDING PROTEIN 2) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TATA-BINDING PROTEIN BINDING
AT1G06230	Predicted Affinity Capture-Western Synthetic Lethality	FSW = 0.1618	Unknown	GTE4 (GLOBAL TRANSCRIPTION FACTOR GROUP E 4) DNA BINDING
AT2G44950	Predicted synthetic growth defect	FSW = 0.2723	Unknown	HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT1G15870	Predicted Affinity Capture-MS Co-expression	FSW = 0.0174	Unknown	MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN / MAM33 FAMILY PROTEIN
AT1G35940	Predicted Synthetic Lethality	FSW = 0.2316	Unknown	MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN / MAM33 FAMILY PROTEIN
AT5G02050	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0194	Unknown	MITOCHONDRIAL GLYCOPROTEIN FAMILY PROTEIN / MAM33 FAMILY PROTEIN
AT1G59900	Predicted Phenotypic Enhancement	FSW = 0.0341	Unknown	AT-E1 ALPHA OXIDOREDUCTASE ACTING ON THE ALDEHYDE OR OXO GROUP OF DONORS DISULFIDE AS ACCEPTOR / PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING)
AT3G54840	Predicted Phenotypic Enhancement	FSW = 0.0145	Unknown	ARA6 GTP BINDING / GTPASE
AT1G10130	Predicted Synthetic Lethality	FSW = 0.0399	Unknown	ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3) CALCIUM-TRANSPORTING ATPASE/ CALMODULIN BINDING / MANGANESE-TRANSPORTING ATPASE/ PEROXIDASE
AT5G47720	Predicted Affinity Capture-MS Co-purification	FSW = 0.0461	Unknown	ACETYL-COA C-ACYLTRANSFERASE PUTATIVE / 3-KETOACYL-COA THIOLASE PUTATIVE
AT2G05170	Predicted synthetic growth defect	FSW = 0.0769	Unknown	ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING
AT3G23580	Predicted Affinity Capture-MS	FSW = 0.0249	Unknown	RNR2A (RIBONUCLEOTIDE REDUCTASE 2A) RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE
AT2G31970	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.3607	Unknown	RAD50 ATP BINDING / NUCLEASE/ ZINC ION BINDING
AT5G57450	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.3415	Unknown	XRCC3 ATP BINDING / DAMAGED DNA BINDING / PROTEIN BINDING / SINGLE-STRANDED DNA BINDING
AT5G66130	Predicted Phenotypic Enhancement Synthetic Rescue	FSW = 0.2239	Unknown	ATRAD17 (ARABIDOPSIS THALIANA RADIATION SENSITIVE)
AT1G62800	Predicted Phenotypic Enhancement	FSW = 0.0173	Unknown	ASP4 (ASPARTATE AMINOTRANSFERASE 4) CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING / TRANSAMINASE/ TRANSFERASE TRANSFERRING NITROGENOUS GROUPS
AT5G40820	Predicted Synthetic Rescue synthetic growth defect Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1211	Unknown	ATRAD3 BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / PROTEIN SERINE/THREONINE KINASE
AT4G16420	Predicted Synthetic Lethality	FSW = 0.0412	Unknown	ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR
AT5G19910	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2241	Unknown	SOH1 FAMILY PROTEIN
AT2G37560	Predicted Synthetic Lethality	FSW = 0.0578	Unknown	ORC2 (ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2) DNA REPLICATION ORIGIN BINDING / PROTEIN BINDING
AT5G54260	Predicted synthetic growth defect	FSW = 0.3873	Unknown	MRE11 (MEIOTIC RECOMBINATION 11) ENDONUCLEASE/ EXONUCLEASE/ HYDROLASE/ MANGANESE ION BINDING / PROTEIN SERINE/THREONINE PHOSPHATASE
AT2G29540	Predicted Affinity Capture-MS Phenotypic Enhancement Co-expression	FSW = 0.0246	Unknown	ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT5G20850	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2324	Unknown	ATRAD51 ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING / SEQUENCE-SPECIFIC DNA BINDING
AT3G22880	Predicted Affinity Capture-MS	FSW = 0.0175	Unknown	DMC1 (DISRUPTION OF MEIOTIC CONTROL 1) ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT3G54860	Predicted synthetic growth defect	FSW = 0.1141	Unknown	VACUOLAR PROTEIN SORTING PROTEIN PUTATIVE
AT1G04850	Predicted Affinity Capture-MS	FSW = 0.0181	Unknown	UBIQUITIN-ASSOCIATED (UBA)/TS-N DOMAIN-CONTAINING PROTEIN
AT4G26230	Predicted Affinity Capture-MS	FSW = 0.0097	Unknown	60S RIBOSOMAL PROTEIN L31 (RPL31B)
AT4G27640	Predicted Affinity Capture-MS Reconstituted Complex	FSW = 0.0261	Unknown	IMPORTIN BETA-2 SUBUNIT FAMILY PROTEIN
AT1G04020	Predicted synthetic growth defect	FSW = 0.2430	Unknown	BARD1 (BREAST CANCER ASSOCIATED RING 1) DNA BINDING / TRANSCRIPTION COACTIVATOR
AT1G04730	Predicted synthetic growth defect	FSW = 0.3925	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT1G10930	Predicted Synthetic Lethality synthetic growth defect synthetic growth defect Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement interaction prediction	FSW = 0.2247	Unknown	RECQ4A ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT1G11930	Predicted Phenotypic Suppression	FSW = 0.0346	Unknown	ALANINE RACEMASE FAMILY PROTEIN
AT1G12470	Predicted synthetic growth defect	FSW = 0.0877	Unknown	PEP3/VPS18/DEEP ORANGE FAMILY PROTEIN
AT1G32750	Predicted interologs mapping Affinity Capture-Western	FSW = 0.0933	Unknown	HAF01 DNA BINDING / HISTONE ACETYLTRANSFERASE
AT1G51710	Predicted Phenotypic Enhancement	FSW = 0.1688	Unknown	UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6) CALMODULIN BINDING / UBIQUITIN-SPECIFIC PROTEASE
AT1G52740	Predicted Synthetic Lethality synthetic growth defect synthetic growth defect Phenotypic Enhancement	FSW = 0.2845	Unknown	HTA9 (HISTONE H2A PROTEIN 9) DNA BINDING
AT1G55300	Predicted interologs mapping Affinity Capture-Western	FSW = 0.0681	Unknown	TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G59890	Predicted synthetic growth defect	FSW = 0.2171	Unknown	SNL5 (SIN3-LIKE 5)
AT1G60430	Predicted Synthetic Lethality	FSW = 0.0541	Unknown	ARPC3 (ACTIN-RELATED PROTEIN C3) STRUCTURAL MOLECULE
AT1G60490	Predicted Synthetic Lethality	FSW = 0.1037	Unknown	ATVPS34 1-PHOSPHATIDYLINOSITOL-3-KINASE/ BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR
AT1G63160	Predicted Affinity Capture-Western	FSW = 0.1388	Unknown	REPLICATION FACTOR C 40 KDA PUTATIVE
AT1G08840	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.1095	Unknown	EMB2411 (EMBRYO DEFECTIVE 2411) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ DNA BINDING
AT1G54140	Predicted Synthetic Lethality	FSW = 0.1958	Unknown	TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT1G67190	Predicted synthetic growth defect	FSW = 0.2775	Unknown	F-BOX FAMILY PROTEIN
AT2G02760	Predicted synthetic growth defect	FSW = 0.2763	Unknown	ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) UBIQUITIN-PROTEIN LIGASE
AT2G16230	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western	FSW = 0.0629	Unknown	CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT2G24960	Predicted Phenotypic Enhancement	FSW = 0.0228	Unknown	UNKNOWN PROTEIN
AT2G32160	Predicted Phenotypic Enhancement	FSW = 0.0034	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S N2227-LIKE (INTERPROIPR012901) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G321701) HAS 325 BLAST HITS TO 315 PROTEINS IN 141 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 95 FUNGI - 130 PLANTS - 30 VIRUSES - 0 OTHER EUKARYOTES - 70 (SOURCE NCBI BLINK)
AT2G44150	Predicted Phenotypic Enhancement	FSW = 0.1374	Unknown	ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3) HISTONE-LYSINE N-METHYLTRANSFERASE
AT2G44580	Predicted synthetic growth defect	FSW = 0.3484	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT3G06670	Predicted Phenotypic Enhancement	FSW = 0.0765	Unknown	BINDING
AT3G12670	Predicted Synthetic Rescue	FSW = 0.0186	Unknown	EMB2742 (EMBRYO DEFECTIVE 2742) CTP SYNTHASE/ CATALYTIC
AT3G18850	Predicted Phenotypic Enhancement	FSW = 0.0084	Unknown	LPAT5 ACYLTRANSFERASE
AT3G18860	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2092	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G22590	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1954	Unknown	RNA POL II ACCESSORY FACTOR CDC73 FAMILY PROTEIN
AT3G25100	Predicted Synthetic Lethality Co-expression	FSW = 0.1870	Unknown	CDC45 (CELL DIVISION CYCLE 45)
AT3G42660	Predicted synthetic growth defect Phenotypic Suppression Co-expression	FSW = 0.3903	Unknown	NUCLEOTIDE BINDING
AT3G46320	Predicted Affinity Capture-MS Affinity Capture-MS Co-purification Affinity Capture-Western Reconstituted Complex	FSW = 0.0730	Unknown	HISTONE H4
AT3G49420	Predicted Affinity Capture-Western	FSW = 0.0399	Unknown	GOT1-LIKE FAMILY PROTEIN
AT3G58560	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.2521	Unknown	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN
AT4G04695	Predicted Co-purification Co-purification Co-purification Co-purification Co-purification Co-purification Co-purification Affinity Capture-MS	FSW = 0.0720	Unknown	CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G14320	Predicted Affinity Capture-MS	FSW = 0.0194	Unknown	60S RIBOSOMAL PROTEIN L36A/L44 (RPL36AB)
AT4G25120	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.2511	Unknown	ATP BINDING / ATP-DEPENDENT DNA HELICASE/ DNA BINDING / HYDROLASE
AT4G27180	Predicted Synthetic Lethality	FSW = 0.1001	Unknown	ATK2 (ARABIDOPSIS THALIANA KINESIN 2) MICROTUBULE BINDING / MICROTUBULE MOTOR
AT4G38630	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1538	Unknown	RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR
AT5G09740	Predicted synthetic growth defect	FSW = 0.2341	Unknown	HAM2 (HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2) H3/H4 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE/ NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G10260	Predicted Phenotypic Enhancement	FSW = 0.1063	Unknown	ATRABH1E (ARABIDOPSIS RAB GTPASE HOMOLOG H1E) GTP BINDING
AT5G10390	Predicted Affinity Capture-MS Affinity Capture-MS Phenotypic Enhancement Co-purification Affinity Capture-Western Co-crystal Structure Reconstituted Complex	FSW = 0.1812	Unknown	HISTONE H3
AT5G10400	Predicted Affinity Capture-Western Co-purification Co-purification Affinity Capture-MS Affinity Capture-Western synthetic growth defect Phenotypic Enhancement Co-crystal Structure Reconstituted Complex	FSW = 0.1821	Unknown	HISTONE H3
AT5G10960	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.2045	Unknown	CCR4-NOT TRANSCRIPTION COMPLEX PROTEIN PUTATIVE
AT5G26250	Predicted Reconstituted Complex	FSW = 0.0133	Unknown	SUGAR TRANSPORTER PUTATIVE
AT5G26680	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.3611	Unknown	ENDONUCLEASE PUTATIVE
AT5G27740	Predicted Phenotypic Enhancement Affinity Capture-Western Phenotypic Enhancement	FSW = 0.1471	Unknown	EMB2775 (EMBRYO DEFECTIVE 2775) DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT5G27970	Predicted Synthetic Lethality Phenotypic Suppression	FSW = 0.1757	Unknown	BINDING
AT5G42000	Predicted Phenotypic Enhancement	FSW = 0.0631	Unknown	ORMDL FAMILY PROTEIN
AT5G45600	Predicted Synthetic Lethality Phenotypic Enhancement Synthetic Lethality	FSW = 0.2581	Unknown	GAS41 PROTEIN BINDING
AT5G53770	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.1555	Unknown	NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN
AT5G55310	Predicted Synthetic Lethality	FSW = 0.0943	Unknown	TOP1BETA (DNA TOPOISOMERASE 1 BETA) DNA TOPOISOMERASE TYPE I
AT5G58180	Predicted Reconstituted Complex Co-purification	FSW = 0.0170	Unknown	ATYKT62
AT5G61150	Predicted Phenotypic Enhancement	FSW = 0.1367	Unknown	VIP4 (VERNALIZATION INDEPENDENCE 4) PROTEIN BINDING
AT5G63920	Predicted Phenotypic Enhancement	FSW = 0.1682	Unknown	DNA TOPOISOMERASE III ALPHA PUTATIVE
AT1G73960	Predicted interologs mapping	FSW = 0.0371	Unknown	TAF2 (TBP-ASSOCIATED FACTOR 2) METALLOPEPTIDASE/ ZINC ION BINDING
AT1G77470	Predicted Affinity Capture-Western Co-expression	FSW = 0.0635	Unknown	REPLICATION FACTOR C 36 KDA PUTATIVE
AT2G23070	Predicted Affinity Capture-MS	FSW = 0.0816	Unknown	CASEIN KINASE II ALPHA CHAIN PUTATIVE
AT2G41340	Predicted Phenotypic Enhancement	FSW = 0.0029	Unknown	RPB5D (RNA POLYMERASE II FIFTH LARGEST SUBUNIT D) DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT3G12400	Predicted synthetic growth defect	FSW = 0.1378	Unknown	ELC UBIQUITIN BINDING
AT3G27060	Predicted Affinity Capture-MS interaction prediction	FSW = 0.0112	Unknown	TSO2 (TSO MEANING UGLY IN CHINESE) OXIDOREDUCTASE/ RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE/ TRANSITION METAL ION BINDING
AT3G45950	Predicted Affinity Capture-MS	FSW = 0.0127	Unknown	SPLICING FACTOR-RELATED
AT4G04210	Predicted Synthetic Lethality	FSW = 0.0818	Unknown	PUX4 PROTEIN BINDING
AT4G11920	Predicted synthetic growth defect	FSW = 0.0992	Unknown	CCS52A2 SIGNAL TRANSDUCER
AT4G19003	Predicted synthetic growth defect	FSW = 0.0629	Unknown	VPS25
AT5G10270	Predicted Synthetic Lethality	FSW = 0.2011	Unknown	CDKC1 (CYCLIN-DEPENDENT KINASE C1) KINASE
AT5G22010	Predicted synthetic growth defect Affinity Capture-Western	FSW = 0.1329	Unknown	ATRFC1 (REPLICATION FACTOR C 1) ATP BINDING / DNA BINDING / DNA CLAMP LOADER/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT5G41700	Predicted Phenotypic Enhancement	FSW = 0.1117	Unknown	UBC8 (UBIQUITIN CONJUGATING ENZYME 8) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G43500	Predicted synthetic growth defect	FSW = 0.2265	Unknown	ATARP9 (ACTIN-RELATED PROTEIN 9) DNA BINDING / PROTEIN BINDING
AT5G63670	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1359	Unknown	SPT42 (SPT4 HOMOLOG 2) POSITIVE TRANSCRIPTION ELONGATION FACTOR/ ZINC ION BINDING
AT5G66100	Predicted Phenotypic Enhancement	FSW = 0.1000	Unknown	LA DOMAIN-CONTAINING PROTEIN
AT5G67100	Predicted synthetic growth defect Co-expression	FSW = 0.0428	Unknown	ICU2 (INCURVATA2) DNA-DIRECTED DNA POLYMERASE
AT2G23080	Predicted Affinity Capture-MS	FSW = 0.0363	Unknown	CASEIN KINASE II ALPHA CHAIN PUTATIVE
AT1G09200	Predicted Affinity Capture-MS Affinity Capture-Western Co-purification synthetic growth defect	FSW = 0.1109	Unknown	HISTONE H3
AT3G07120	Predicted synthetic growth defect	FSW = 0.1867	Unknown	ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN
AT1G55255	Predicted synthetic growth defect	FSW = 0.1885	Unknown	ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN
AT5G40490	Predicted synthetic growth defect Co-expression	FSW = 0.0959	Unknown	RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT2G23420	Predicted synthetic growth defect	FSW = 0.1244	Unknown	NAPRT2 (NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2) NICOTINATE PHOSPHORIBOSYLTRANSFERASE
AT1G14400	Predicted synthetic growth defect	FSW = 0.2140	Unknown	UBC1 (UBIQUITIN CARRIER PROTEIN 1) UBIQUITIN-PROTEIN LIGASE
AT1G10450	Predicted synthetic growth defect	FSW = 0.1329	Unknown	SNL6 (SIN3-LIKE 6)
AT1G15920	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.1950	Unknown	CCR4-NOT TRANSCRIPTION COMPLEX PROTEIN PUTATIVE
AT5G55300	Predicted Synthetic Lethality interaction prediction	FSW = 0.0441	Unknown	TOP1ALPHA (DNA TOPOISOMERASE I ALPHA) DNA TOPOISOMERASE TYPE I
AT5G08565	Predicted Synthetic Lethality	FSW = 0.0909	Unknown	POSITIVE TRANSCRIPTION ELONGATION FACTOR/ ZINC ION BINDING
AT2G18000	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.1874	Unknown	TAF14 (TBP-ASSOCIATED FACTOR 14)
AT5G54670	Predicted interaction prediction	FSW = 0.0318	Unknown	ATK3 (ARABIDOPSIS THALIANA KINESIN 3) ATPASE/ MICROTUBULE BINDING / MICROTUBULE MOTOR

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT1G66740 - ( SGA2 )

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