Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Welcome to AtPIN
AtPIN will be upgraded. Please send your suggestions here
AT1G66410 - ( CAM4 (calmodulin 4) calcium ion binding / signal transducer )
192 Proteins interacs with AT1G66410Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT3G02880 | Experimentalprotein array | FSW = 0.0362
| Class A:plasma membraneClass B:vacuoleextracellularClass D:cytosol (p = 0.67) | LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE PUTATIVE |
AT5G49760 | Experimentalprotein array | FSW = 0.0492
| Class A:plasma membraneClass B:vacuoleClass D:nucleus (p = 0.78)cytosol (p = 0.67) | LEUCINE-RICH REPEAT FAMILY PROTEIN / PROTEIN KINASE FAMILY PROTEIN |
AT2G26730 | Experimentalprotein array | FSW = 0.0230
| Class A:plasma membraneClass B:vacuoleClass D:cytosol (p = 0.67) | LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE PUTATIVE |
AT5G56030 | Experimentalprotein array | FSW = 0.0084
| Class A:plasma membraneClass B:peroxisomemitochondrioncytosolClass D:cytosol (p = 0.67) | HSP81-2 (HEAT SHOCK PROTEIN 81-2) ATP BINDING |
AT4G23650 | Experimentalprotein array | FSW = 0.0354
| Class A:plasma membraneClass B:nucleuscytosolClass D:nucleus (p = 0.78) | CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6) ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT2G02800 | Experimentalprotein array | FSW = 0.0295
| Class A:plasma membraneClass B:nucleuscytosolClass D:cytosol (p = 0.67) | APK2B (PROTEIN KINASE 2B) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G27070 | Experimentalprotein array | FSW = 0.0554
| Class A:plasma membraneClass B:nucleusClass D:nucleus (p = 0.78) | AGL53 TRANSCRIPTION FACTOR |
AT1G74740 | Experimentalprotein array | FSW = 0.0411
| Class A:plasma membraneClass B:extracellularClass D:nucleus (p = 0.78) | CPK30 (CALCIUM-DEPENDENT PROTEIN KINASE 30) CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE |
AT1G09840 | Experimentalprotein array | FSW = 0.0266
| Class A:plasma membraneClass D:nucleus (p = 0.78)cytosol (p = 0.67) | ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41) ATP BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT3G19100 | Experimentalprotein array | FSW = 0.0337
| Class A:plasma membraneClass D:nucleus (p = 0.78)cytosol (p = 0.67) | CALCIUM-DEPENDENT PROTEIN KINASE PUTATIVE / CDPK PUTATIVE |
AT1G54610 | Experimentalprotein array | FSW = 0.0495
| Class A:plasma membraneClass D:nucleus (p = 0.78) | PROTEIN KINASE FAMILY PROTEIN |
AT5G13790 | Experimentalprotein array | FSW = 0.0210
| Class A:plasma membraneClass D:nucleus (p = 0.78) | AGL15 (AGAMOUS-LIKE 15) DNA BINDING / TRANSCRIPTION FACTOR |
AT2G48010 | Experimentalprotein array | FSW = 0.0576
| Class A:plasma membraneClass D:nucleus (p = 0.78) | RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) KINASE/ RECEPTOR SIGNALING PROTEIN SERINE/THREONINE KINASE |
AT3G23310 | Experimentalprotein array | FSW = 0.0363
| Class A:plasma membraneClass D:nucleus (p = 0.78) | PROTEIN KINASE PUTATIVE |
AT5G01890 | Experimentalprotein array | FSW = 0.0482
| Class A:plasma membraneClass D:cytosol (p = 0.67) | LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE PUTATIVE |
AT1G27190 | Experimentalprotein array | FSW = 0.0452
| Class A:plasma membraneClass D:cytosol (p = 0.67) | LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE PUTATIVE |
AT2G26650 | Experimental | FSW = 0.0108
| Class A:plasma membraneClass D:cytosol (p = 0.67) | AKT1 (ARABIDOPSIS K TRANSPORTER 1) CYCLIC NUCLEOTIDE BINDING / INWARD RECTIFIER POTASSIUM CHANNEL |
AT3G28450 | Experimentalprotein array | FSW = 0.1109
| Class A:plasma membraneClass D:cytosol (p = 0.67) | LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE PUTATIVE |
AT1G56145 | Experimentalprotein array | FSW = 0.0576
| Class A:plasma membraneClass D:cytosol (p = 0.67) | LEUCINE-RICH REPEAT FAMILY PROTEIN / PROTEIN KINASE FAMILY PROTEIN |
AT4G35600 | Experimentalprotein array | FSW = 0.0490
| Class A:plasma membrane | CONNEXIN 32 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT3G56270 | Experimentalprotein array | FSW = 0.0517
| Class B:vacuoleplasma membranegolgiClass D:nucleus (p = 0.78)cytosol (p = 0.67) | UNKNOWN PROTEIN |
AT4G37870 | Experimentalprotein array | FSW = 0.0250
| Class B:unclearplasma membranenucleusextracellularClass D:cytosol (p = 0.67) | PCK1 (PHOSPHOENOLPYRUVATE CARBOXYKINASE 1) ATP BINDING / PHOSPHOENOLPYRUVATE CARBOXYKINASE (ATP)/ PHOSPHOENOLPYRUVATE CARBOXYKINASE/ PURINE NUCLEOTIDE BINDING |
AT4G28706 | Experimentalprotein array | FSW = 0.0250
| Class B:plastidplasma membrane | PFKB-TYPE CARBOHYDRATE KINASE FAMILY PROTEIN |
ATCG00020 | Experimentalprotein array | FSW = 0.0280
| Class B:plastidplasma membrane | ENCODES CHLOROPHYLL BINDING PROTEIN D1 A PART OF THE PHOTOSYSTEM II REACTION CENTER CORE |
AT5G20810 | Experimentalprotein array | FSW = 0.0379
| Class B:plasma membraneperoxisomeClass D:cytosol (p = 0.67) | AUXIN-RESPONSIVE PROTEIN PUTATIVE / SMALL AUXIN UP RNA (SAUR_B) |
AT4G18950 | Experimentalprotein array | FSW = 0.0482
| Class B:plasma membranenucleuscytosolClass D:nucleus (p = 0.78) | ANKYRIN PROTEIN KINASE PUTATIVE |
AT4G02640 | Experimentalprotein array | FSW = 0.0594
| Class B:plasma membranenucleuscytosolClass D:nucleus (p = 0.78) | BZO2H1 DNA BINDING / PROTEIN HETERODIMERIZATION/ SEQUENCE-SPECIFIC DNA BINDING / TRANSCRIPTION FACTOR |
AT4G14340 | Experimentalprotein array | FSW = 0.0169
| Class B:plasma membranenucleuscytosolClass D:nucleus (p = 0.78) | CKI1 (CASEIN KINASE I) KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT2G46130 | Experimentalprotein array | FSW = 0.0487
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78)cytosol (p = 0.67) | WRKY43 TRANSCRIPTION FACTOR |
AT3G04100 | Experimentalprotein array | FSW = 0.0361
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78)cytosol (p = 0.67) | AGL57 DNA BINDING / TRANSCRIPTION FACTOR |
AT5G27050 | Experimentalprotein array | FSW = 0.0316
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78)cytosol (p = 0.67) | AGL101 TRANSCRIPTION FACTOR |
AT4G23810 | Experimentalprotein array | FSW = 0.0615
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78)cytosol (p = 0.67) | WRKY53 DNA BINDING / PROTEIN BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR |
AT5G49450 | Experimentalprotein array | FSW = 0.0594
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | ATBZIP1 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 1) DNA BINDING / PROTEIN HETERODIMERIZATION/ TRANSCRIPTION FACTOR |
AT3G58120 | Experimentalprotein array | FSW = 0.0576
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | BZIP61 DNA BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR |
AT5G38800 | Experimentalprotein array | FSW = 0.0613
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | ATBZIP43 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 43) DNA BINDING / TRANSCRIPTION FACTOR |
AT5G23260 | Experimentalprotein array | FSW = 0.0163
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | TT16 (TRANSPARENT TESTA16) TRANSCRIPTION FACTOR |
AT1G58110 | Experimentalprotein array | FSW = 0.0557
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | BZIP FAMILY TRANSCRIPTION FACTOR |
AT5G24800 | Experimentalprotein array | FSW = 0.0579
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | BZIP9 (BASIC LEUCINE ZIPPER 9) DNA BINDING / PROTEIN HETERODIMERIZATION/ TRANSCRIPTION FACTOR |
AT3G30260 | Experimentalprotein array | FSW = 0.0389
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | AGL79 (AGAMOUS-LIKE 79) DNA BINDING / TRANSCRIPTION FACTOR |
AT5G48670 | Experimentalprotein array | FSW = 0.0576
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | AGL80 (AGAMOUS-LIKE 80) DNA BINDING / TRANSCRIPTION FACTOR |
AT5G15830 | Experimentalprotein array | FSW = 0.0557
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | ATBZIP3 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 3) DNA BINDING / TRANSCRIPTION FACTOR |
AT1G59530 | Experimentalprotein array | FSW = 0.0576
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | ATBZIP4 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 4) DNA BINDING / TRANSCRIPTION FACTOR |
AT3G19290 | Experimentalprotein array | FSW = 0.0531
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | ABF4 (ABRE BINDING FACTOR 4) DNA BINDING / PROTEIN BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR |
AT3G12250 | Experimentalprotein array | FSW = 0.0075
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | TGA6 (TGACG MOTIF-BINDING FACTOR 6) DNA BINDING / TRANSCRIPTION FACTOR |
AT3G62420 | Experimentalprotein array | FSW = 0.0553
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | ATBZIP53 (BASIC REGION/LEUCINE ZIPPER MOTIF 53) DNA BINDING / PROTEIN HETERODIMERIZATION/ SEQUENCE-SPECIFIC DNA BINDING / TRANSCRIPTION FACTOR |
AT2G31180 | Experimentalprotein array | FSW = 0.0613
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | MYB14 (MYB DOMAIN PROTEIN 14) DNA BINDING / TRANSCRIPTION FACTOR |
AT2G23290 | Experimentalprotein array | FSW = 0.0653
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | ATMYB70 (MYB DOMAIN PROTEIN 70) DNA BINDING / TRANSCRIPTION FACTOR |
AT1G77145 | Experimentalprotein array | FSW = 0.1222
| Class B:plasma membranenucleusClass D:nucleus (p = 0.78) | UNKNOWN PROTEIN |
AT5G66770 | Experimentalprotein array | FSW = 0.0459
| Class B:plasma membranenucleusClass D:cytosol (p = 0.67) | SCARECROW TRANSCRIPTION FACTOR FAMILY PROTEIN |
AT2G04890 | Experimentalprotein array | FSW = 0.0557
| Class B:plasma membranenucleusClass D:cytosol (p = 0.67) | SCL21 (SCARECROW-LIKE 21) TRANSCRIPTION FACTOR |
AT4G37940 | Experimentalprotein array | FSW = 0.0303
| Class B:plasma membranenucleusClass D:cytosol (p = 0.67) | AGL21 TRANSCRIPTION FACTOR |
AT5G41920 | Experimentalprotein array | FSW = 0.0421
| Class B:plasma membranenucleusClass D:cytosol (p = 0.67) | SCARECROW TRANSCRIPTION FACTOR FAMILY PROTEIN |
AT2G24840 | Experimentalprotein array | FSW = 0.0445
| Class B:plasma membranenucleus | AGL61 (AGAMOUS-LIKE 61) DNA BINDING / TRANSCRIPTION FACTOR |
AT4G23290 | Experimentalprotein array | FSW = 0.0117
| Class B:plasma membranemitochondrionClass D:nucleus (p = 0.78)cytosol (p = 0.67) | PROTEIN KINASE FAMILY PROTEIN |
AT4G36250 | Experimentalprotein array | FSW = 0.0426
| Class B:plasma membraneendoplasmic reticulumClass D:cytosol (p = 0.67) | ALDH3F1 (ALDEHYDE DEHYDROGENASE 3F1) 3-CHLOROALLYL ALDEHYDE DEHYDROGENASE/ ALDEHYDE DEHYDROGENASE (NAD) |
AT2G28380 | Experimentalprotein array | FSW = 0.0426
| Class B:plasma membranecytosolClass D:nucleus (p = 0.78)cytosol (p = 0.67) | DRB2 (DSRNA-BINDING PROTEIN 2) DOUBLE-STRANDED RNA BINDING |
AT1G75100 | Experimentalprotein array | FSW = 0.0164
| Class B:plasma membranecytosolClass D:nucleus (p = 0.78) | JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1) HEAT SHOCK PROTEIN BINDING |
AT3G44200 | Experimentalprotein array | FSW = 0.0205
| Class B:plasma membranecytoskeletonClass D:nucleus (p = 0.78) | NEK6 (NIMA (NEVER IN MITOSIS GENE A)-RELATED 6) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G60910 | Experimentalprotein array | FSW = 0.0180
| Class D:nucleus (p = 0.78) | AGL8 (AGAMOUS-LIKE 8) TRANSCRIPTION FACTOR |
AT1G69270 | Experimentalprotein array | FSW = 0.0262
| Class D:cytosol (p = 0.67) | RPK1 (RECEPTOR-LIKE PROTEIN KINASE 1) KINASE/ PROTEIN BINDING / RECEPTOR SIGNALING PROTEIN SERINE/THREONINE KINASE |
AT3G13320 | Experimentalprotein array | FSW = 0.0130
| Unknown | CAX2 (CATION EXCHANGER 2) CALCIUMCATION ANTIPORTER/ CALCIUMHYDROGEN ANTIPORTER |
AT5G39670 | Experimentalprotein array | FSW = 0.1441
| Unknown | CALCIUM-BINDING EF HAND FAMILY PROTEIN |
AT1G12680 | Experimentalprotein array | FSW = 0.0361
| Unknown | PEPKR2 (PHOSPHOENOLPYRUVATE CARBOXYLASE-RELATED KINASE 2) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G35410 | Experimentalprotein array | FSW = 0.0233
| Unknown | SOS2 (SALT OVERLY SENSITIVE 2) KINASE/ PROTEIN KINASE |
AT4G30960 | Experimentalprotein array | FSW = 0.0329
| Unknown | SIP3 (SOS3-INTERACTING PROTEIN 3) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT1G20930 | Experimentalprotein array | FSW = 0.0280
| Unknown | CDKB22 (CYCLIN-DEPENDENT KINASE B22) CYCLIN-DEPENDENT PROTEIN KINASE/ KINASE |
AT2G20110 | Experimentalprotein array | FSW = 0.0421
| Unknown | TESMIN/TSO1-LIKE CXC DOMAIN-CONTAINING PROTEIN |
AT3G59150 | Experimentalprotein array | FSW = 0.0490
| Unknown | F-BOX FAMILY PROTEIN |
AT3G20110 | Experimentalprotein array | FSW = 0.0345
| Unknown | CYP705A20 ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING / MONOOXYGENASE/ OXYGEN BINDING |
AT3G61880 | Experimentalprotein array | FSW = 0.0361
| Unknown | CYP78A9 (CYTOCHROME P450 78A9) MONOOXYGENASE/ OXYGEN BINDING |
AT4G08980 | Experimentalprotein array | FSW = 0.0345
| Unknown | F-BOX FAMILY PROTEIN (FBW2) |
AT4G24390 | Experimentalprotein array | FSW = 0.0452
| Unknown | F-BOX FAMILY PROTEIN (FBX14) |
AT3G12350 | Experimentalprotein array | FSW = 0.0262
| Unknown | F-BOX FAMILY PROTEIN |
AT2G24540 | Experimentalprotein array | FSW = 0.0217
| Unknown | AFR (ATTENUATED FAR-RED RESPONSE) |
AT4G02410 | Experimentalprotein array | FSW = 0.0482
| Unknown | LECTIN PROTEIN KINASE FAMILY PROTEIN |
AT5G46590 | Experimentalprotein array | FSW = 0.0164
| Unknown | ANAC096 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 96) TRANSCRIPTION FACTOR |
AT3G04430 | Experimentalprotein array | FSW = 0.0361
| Unknown | ANAC049 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 49) TRANSCRIPTION FACTOR |
AT1G60040 | Experimentalprotein array | FSW = 0.0402
| Unknown | AGL49 (AGAMOUS-LIKE 49) TRANSCRIPTION FACTOR |
AT5G39810 | Experimentalprotein array | FSW = 0.0452
| Unknown | AGL98 (AGAMOUS-LIKE 98) TRANSCRIPTION FACTOR |
AT5G26870 | Experimentalprotein array | FSW = 0.0091
| Unknown | AGL26 TRANSCRIPTION FACTOR |
AT5G41200 | Experimentalprotein array | FSW = 0.0421
| Unknown | AGL75 (AGAMOUS-LIKE 75) DNA BINDING / TRANSCRIPTION FACTOR |
AT5G49490 | Experimentalprotein array | FSW = 0.0613
| Unknown | AGL83 (AGAMOUS-LIKE 83) DNA BINDING / TRANSCRIPTION FACTOR |
AT5G55690 | Experimentalprotein array | FSW = 0.0306
| Unknown | MADS-BOX PROTEIN (AGL47) |
AT5G40120 | Experimentalprotein array | FSW = 0.0426
| Unknown | AGL76 (AGAMOUS-LIKE 76) DNA BINDING / TRANSCRIPTION FACTOR |
AT1G10210 | Experimentalprotein array | FSW = 0.0023
| Unknown | ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP KINASE/ KINASE |
AT1G53510 | Experimentalprotein array | FSW = 0.0361
| Unknown | ATMPK18 MAP KINASE |
ATMG00870 | Experimentalprotein array | FSW = 0.0517
| Unknown | HYPOTHETICAL PROTEIN |
AT4G23050 | Experimentalprotein array | FSW = 0.1352
| Unknown | PROTEIN KINASE PUTATIVE |
AT3G50310 | Experimentalprotein array | FSW = 0.0613
| Unknown | MAPKKK20 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT4G37240 | Experimentalprotein array | FSW = 0.0653
| Unknown | UNKNOWN PROTEIN |
AT4G26270 | Experimentalprotein array | FSW = 0.0278
| Unknown | PFK3 (PHOSPHOFRUCTOKINASE 3) 6-PHOSPHOFRUCTOKINASE |
AT5G47810 | Experimentalprotein array | FSW = 0.0452
| Unknown | PFK2 (PHOSPHOFRUCTOKINASE 2) 6-PHOSPHOFRUCTOKINASE |
AT4G13020 | Experimentalprotein array | FSW = 0.0146
| Unknown | MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT3G12200 | Experimentalprotein array | FSW = 0.0107
| Unknown | ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
AT4G04570 | Experimentalprotein array | FSW = 0.0402
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT1G68380 | Experimentalprotein array | FSW = 0.0576
| Unknown | UNKNOWN PROTEIN |
AT1G80120 | Experimentalprotein array | FSW = 0.0459
| Unknown | UNKNOWN PROTEIN |
AT5G63770 | Experimentalprotein array | FSW = 0.0063
| Unknown | ATDGK2 (DIACYLGLYCEROL KINASE 2) DIACYLGLYCEROL KINASE |
AT5G64400 | Experimentalprotein array | FSW = 0.0262
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CHCH (INTERPROIPR010625) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G095701) HAS 218 BLAST HITS TO 216 PROTEINS IN 80 SPECIES ARCHAE - 0 BACTERIA - 10 METAZOA - 66 FUNGI - 60 PLANTS - 47 VIRUSES - 0 OTHER EUKARYOTES - 35 (SOURCE NCBI BLINK) |
AT4G18630 | Experimentalprotein array | FSW = 0.0406
| Unknown | UNKNOWN PROTEIN |
AT4G16410 | Experimentalprotein array | FSW = 0.0262
| Unknown | UNKNOWN PROTEIN |
AT4G23170 | Experimentalprotein array | FSW = 0.0517
| Unknown | EP1 PROTEIN KINASE |
AT5G10520 | Experimentalprotein array | FSW = 0.0402
| Unknown | RBK1 (ROP BINDING PROTEIN KINASES 1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT1G14370 | Experimentalprotein array | FSW = 0.0452
| Unknown | APK2A (PROTEIN KINASE 2A) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G23170 | Experimentalprotein array | FSW = 0.0164
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT1G28390 | Experimentalprotein array | FSW = 0.0452
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT5G56040 | Experimentalprotein array | FSW = 0.0544
| Unknown | LEUCINE-RICH REPEAT PROTEIN KINASE PUTATIVE |
AT1G68400 | Experimentalprotein array | FSW = 0.0421
| Unknown | LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE PUTATIVE |
AT5G24080 | Experimentalprotein array | FSW = 0.0389
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT2G30980 | Experimentalprotein array | FSW = 0.0533
| Unknown | ASKDZETA (ARABIDOPSIS SHAGGY-RELATED PROTEIN KINASE DZETA) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT4G39540 | Experimentalprotein array | FSW = 0.0653
| Unknown | SHIKIMATE KINASE FAMILY PROTEIN |
AT4G34380 | Experimentalprotein array | FSW = 0.0637
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT5G66790 | Experimentalprotein array | FSW = 0.0708
| Unknown | PROTEIN KINASE FAMILY PROTEIN |
AT3G56070 | Experimental | FSW = 0.0509
| Unknown | ROC2 (ROTAMASE CYCLOPHILIN 2) CYCLOSPORIN A BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
AT2G46240 | Experimental | FSW = 0.0505
| Unknown | BAG6 (BCL-2-ASSOCIATED ATHANOGENE 6) CALMODULIN BINDING / PROTEIN BINDING |
AT5G13840 | Experimentalbiochemical | FSW = 0.0083
| Unknown | FZR3 (FIZZY-RELATED 3) SIGNAL TRANSDUCER |
AT4G11260 | Experimentalfilter binding | FSW = 0.0043
| Unknown | SGT1B PROTEIN BINDING |
AT3G49910 | PredictedReconstituted Complex | FSW = 0.0033
| Class C:plasma membrane | 60S RIBOSOMAL PROTEIN L26 (RPL26A) |
AT1G23190 | PredictedAffinity Capture-MS | FSW = 0.0021
| Class C:plasma membrane | PHOSPHOGLUCOMUTASE CYTOPLASMIC PUTATIVE / GLUCOSE PHOSPHOMUTASE PUTATIVE |
AT2G27030 | PredictedGene fusion methodPhylogenetic profile methodCo-expression | FSW = 0.2369
| Class C:plasma membrane | CAM5 (CALMODULIN 5) CALCIUM ION BINDING |
AT1G53850 | PredictedReconstituted Complex | FSW = 0.0048
| Class C:plasma membrane | PAE1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE |
AT5G09650 | PredictedAffinity Capture-MSReconstituted Complex | FSW = 0.0123
| Class C:plasma membrane | ATPPA6 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 6) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE |
AT2G16600 | PredictedAffinity Capture-MSAffinity Capture-MSEnriched domain pairCo-expression | FSW = 0.0048
| Class C:plasma membrane | ROC3 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
AT1G12310 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2409
| Class C:plasma membrane | CALMODULIN PUTATIVE |
AT3G61650 | PredictedAffinity Capture-Westerninterologs mapping | FSW = 0.0181
| Class C:plasma membrane | TUBG1 (GAMMA-TUBULIN) GTP BINDING / GTPASE/ STRUCTURAL MOLECULE |
AT1G76650 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2681
| Class C:plasma membrane | CALCIUM-BINDING EF HAND FAMILY PROTEIN |
AT1G20760 | PredictedAffinity Capture-MS | FSW = 0.0025
| Class C:plasma membrane | CALCIUM-BINDING EF HAND FAMILY PROTEIN |
AT3G50360 | Predictedinterologs mappingPhylogenetic profile methodCo-expression | FSW = 0.2263
| Class C:plasma membrane | ATCEN2 (CENTRIN2) CALCIUM ION BINDING |
AT5G37770 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2920
| Class C:plasma membrane | TCH2 (TOUCH 2) CALCIUM ION BINDING |
AT1G10900 | Predictedinterologs mapping | FSW = 0.0032
| Class C:plasma membrane | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN |
AT3G43810 | PredictedGene fusion methodPhylogenetic profile methodCo-expression | FSW = 0.7586
| Class C:plasma membrane | CAM7 (CALMODULIN 7) CALCIUM ION BINDING |
AT2G30110 | PredictedAffinity Capture-MS | FSW = 0.0046
| Class C:plasma membrane | ATUBA1 UBIQUITIN ACTIVATING ENZYME/ UBIQUITIN-PROTEIN LIGASE |
AT1G65960 | PredictedAffinity Capture-Western | FSW = 0.0117
| Class C:plasma membrane | GAD2 (GLUTAMATE DECARBOXYLASE 2) CALMODULIN BINDING / GLUTAMATE DECARBOXYLASE |
AT1G02920 | PredictedAffinity Capture-MS | FSW = 0.0203
| Unknown | GSTF7 COPPER ION BINDING / GLUTATHIONE BINDING / GLUTATHIONE TRANSFERASE |
AT2G05710 | PredictedAffinity Capture-MS | FSW = 0.0077
| Unknown | ACONITATE HYDRATASE CYTOPLASMIC PUTATIVE / CITRATE HYDRO-LYASE/ACONITASE PUTATIVE |
AT4G11010 | PredictedAffinity Capture-MS | FSW = 0.0048
| Unknown | NDPK3 (NUCLEOSIDE DIPHOSPHATE KINASE 3) ATP BINDING / NUCLEOSIDE DIPHOSPHATE KINASE |
AT5G54770 | PredictedReconstituted Complex | FSW = 0.0040
| Unknown | THI1 PROTEIN HOMODIMERIZATION |
AT5G63840 | PredictedReconstituted Complex | FSW = 0.0041
| Unknown | RSW3 (RADIAL SWELLING 3) GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS |
AT1G48090 | PredictedAffinity Capture-MS | FSW = 0.0162
| Unknown | PHOSPHOINOSITIDE BINDING |
AT2G07640 | PredictedReconstituted Complex | FSW = 0.0027
| Unknown | D2D4-DIENOYL-COA REDUCTASE-RELATED |
AT4G37010 | PredictedPhylogenetic profile method | FSW = 0.2471
| Unknown | CALTRACTIN PUTATIVE / CENTRIN PUTATIVE |
AT1G08970 | PredictedReconstituted Complex | FSW = 0.0068
| Unknown | NF-YC9 (NUCLEAR FACTOR Y SUBUNIT C9) DNA BINDING / TRANSCRIPTION FACTOR |
AT2G44680 | PredictedAffinity Capture-Western | FSW = 0.0077
| Unknown | CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE |
AT4G03290 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2877
| Unknown | CALCIUM-BINDING PROTEIN PUTATIVE |
AT1G62820 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2793
| Unknown | CALMODULIN PUTATIVE |
AT5G37780 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2834
| Unknown | CAM1 (CALMODULIN 1) CALCIUM ION BINDING |
AT1G14610 | PredictedAffinity Capture-MS | FSW = 0.0131
| Unknown | TWN2 (TWIN 2) ATP BINDING / AMINOACYL-TRNA LIGASE/ NUCLEOTIDE BINDING / VALINE-TRNA LIGASE |
AT4G30600 | PredictedReconstituted Complex | FSW = 0.0116
| Unknown | SIGNAL RECOGNITION PARTICLE RECEPTOR ALPHA SUBUNIT FAMILY PROTEIN |
AT2G15400 | PredictedReconstituted Complex | FSW = 0.0020
| Unknown | NRPE3B DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION |
AT1G16190 | PredictedAffinity Capture-MS | FSW = 0.0066
| Unknown | DNA REPAIR PROTEIN RAD23 PUTATIVE |
AT5G49480 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2834
| Unknown | ATCP1 (CA2+-BINDING PROTEIN 1) CALCIUM ION BINDING |
AT5G14800 | PredictedReconstituted Complex | FSW = 0.0063
| Unknown | P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE) PYRROLINE-5-CARBOXYLATE REDUCTASE |
AT3G03000 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2834
| Unknown | CALMODULIN PUTATIVE |
AT1G08830 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.0021
| Unknown | CSD1 (COPPER/ZINC SUPEROXIDE DISMUTASE 1) SUPEROXIDE DISMUTASE |
AT4G24040 | PredictedAffinity Capture-MS | FSW = 0.0095
| Unknown | TRE1 (TREHALASE 1) ALPHAALPHA-TREHALASE/ TREHALASE |
AT3G18430 | PredictedAffinity Capture-MS | FSW = 0.0137
| Unknown | CALCIUM-BINDING EF HAND FAMILY PROTEIN |
AT2G22480 | PredictedAffinity Capture-MS | FSW = 0.0115
| Unknown | PFK5 (PHOSPHOFRUCTOKINASE 5) 6-PHOSPHOFRUCTOKINASE |
AT1G66740 | PredictedAffinity Capture-MS | FSW = 0.0028
| Unknown | SGA2 |
AT3G20790 | PredictedAffinity Capture-MS | FSW = 0.0115
| Unknown | OXIDOREDUCTASE FAMILY PROTEIN |
AT1G18890 | PredictedAffinity Capture-MSAffinity Capture-MSReconstituted Complex | FSW = 0.0295
| Unknown | ATCDPK1 (CALCIUM-DEPENDENT PROTEIN KINASE 1) CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE |
AT1G04160 | PredictedAffinity Capture-MSReconstituted ComplexEnriched domain pairCo-expression | FSW = 0.0132
| Unknown | XIB (MYOSIN XI B) MOTOR |
AT4G10320 | PredictedAffinity Capture-MS | FSW = 0.0083
| Unknown | ISOLEUCYL-TRNA SYNTHETASE PUTATIVE / ISOLEUCINE--TRNA LIGASE PUTATIVE |
AT1G01750 | PredictedAffinity Capture-MS | FSW = 0.0054
| Unknown | ADF11 (ACTIN DEPOLYMERIZING FACTOR 11) ACTIN BINDING |
AT4G18900 | PredictedAffinity Capture-MS | FSW = 0.0052
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT2G07690 | PredictedAffinity Capture-MS | FSW = 0.0071
| Unknown | MINICHROMOSOME MAINTENANCE FAMILY PROTEIN / MCM FAMILY PROTEIN |
AT1G30825 | Predictedinterologs mappinginterologs mappingAffinity Capture-WesternAffinity Capture-Westerninterologs mappingReconstituted Complextwo hybrid | FSW = 0.0280
| Unknown | DIS2 (DISTORTED TRICHOMES 2) STRUCTURAL MOLECULE |
AT1G13180 | PredictedAffinity Capture-Western | FSW = 0.0112
| Unknown | DIS1 (DISTORTED TRICHOMES 1) ATP BINDING / ACTIN BINDING / PROTEIN BINDING / STRUCTURAL CONSTITUENT OF CYTOSKELETON |
AT2G23070 | PredictedAffinity Capture-Westerninterologs mapping | FSW = 0.0110
| Unknown | CASEIN KINASE II ALPHA CHAIN PUTATIVE |
AT4G17380 | PredictedReconstituted Complex | FSW = 0.0058
| Unknown | MSH4 (MUTS HOMOLOG 4) ATP BINDING / DAMAGED DNA BINDING / MISMATCHED DNA BINDING |
AT5G23540 | PredictedReconstituted Complex | FSW = 0.0051
| Unknown | 26S PROTEASOME REGULATORY SUBUNIT PUTATIVE |
AT5G24260 | PredictedReconstituted Complex | FSW = 0.0112
| Unknown | PROLYL OLIGOPEPTIDASE FAMILY PROTEIN |
AT5G03080 | PredictedSynthetic Lethality | FSW = 0.0187
| Unknown | PHOSPHATIDIC ACID PHOSPHATASE-RELATED / PAP2-RELATED |
AT1G05990 | PredictedGene neighbors methodPhylogenetic profile methodCo-expression | FSW = 0.2920
| Unknown | CALCIUM-BINDING PROTEIN PUTATIVE |
AT1G18530 | PredictedGene neighbors methodPhylogenetic profile methodCo-expression | FSW = 0.2834
| Unknown | CALMODULIN PUTATIVE |
AT1G32250 | PredictedGene neighbors methodPhylogenetic profile methodCo-expression | FSW = 0.2877
| Unknown | CALMODULIN PUTATIVE |
AT3G03400 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2920
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT2G36180 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2877
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT3G03410 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2920
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT4G12860 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2920
| Unknown | UNE14 (UNFERTILIZED EMBRYO SAC 14) CALCIUM ION BINDING |
AT1G73630 | PredictedGene neighbors methodPhylogenetic profile methodCo-expression | FSW = 0.2877
| Unknown | CALCIUM-BINDING PROTEIN PUTATIVE |
AT3G56800 | PredictedGene fusion methodPhylogenetic profile methodCo-expression | FSW = 0.2877
| Unknown | CAM3 (CALMODULIN 3) CALCIUM ION BINDING |
AT2G41110 | PredictedGene fusion methodPhylogenetic profile methodCo-expression | FSW = 0.2834
| Unknown | CAM2 (CALMODULIN 2) CALCIUM ION BINDING / PROTEIN BINDING |
AT3G25600 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2920
| Unknown | CALCIUM ION BINDING |
AT4G14640 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.5864
| Unknown | CAM8 (CALMODULIN 8) CALCIUM ION BINDING |
AT3G22930 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2920
| Unknown | CALMODULIN PUTATIVE |
AT1G76640 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2844
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT5G17470 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2834
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT3G07490 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2920
| Unknown | AGD11 (ARF-GAP DOMAIN 11) CALCIUM ION BINDING |
AT1G66400 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.2834
| Unknown | CALMODULIN-RELATED PROTEIN PUTATIVE |
AT3G51920 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.7618
| Unknown | CAM9 (CALMODULIN 9) CALCIUM ION BINDING |
AT5G21274 | PredictedGene fusion methodPhylogenetic profile method | FSW = 0.6898
| Unknown | CAM6 (CALMODULIN 6) CALCIUM ION BINDING |
AT1G21550 | PredictedPhylogenetic profile method | FSW = 0.2793
| Unknown | CALCIUM-BINDING PROTEIN PUTATIVE |
Downloads
Quick help
Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454