Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT3G13445 - ( TBP1 (TATA BINDING PROTEIN 1) DNA binding / RNA polymerase II transcription factor/ binding )
275 Proteins interacs with AT3G13445Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT4G31720 | Experimentaltwo hybrid | FSW = 0.0912
| Class A:nucleusClass D:nucleus (p = 0.78) | TAFII15 (TBP-ASSOCIATED FACTOR II 15) RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION FACTOR |
AT4G17750 | Experimentalpull downaffinity technologytwo hybrid | FSW = 0.0114
| Class A:nucleusClass D:nucleus (p = 0.78) | HSF1 (HEAT SHOCK FACTOR 1) DNA BINDING / PROTEIN BINDING / TRANSCRIPTION FACTOR |
AT1G32750 | Experimentaltwo hybrid | FSW = 0.1329
| Unknown | HAF01 DNA BINDING / HISTONE ACETYLTRANSFERASE |
AT3G04920 | PredictedAffinity Capture-MS | FSW = 0.0116
| Class C:nucleus | 40S RIBOSOMAL PROTEIN S24 (RPS24A) |
AT1G33120 | PredictedAffinity Capture-MS | FSW = 0.0169
| Class C:nucleus | 60S RIBOSOMAL PROTEIN L9 (RPL90B) |
AT3G09630 | PredictedPhenotypic Enhancement | FSW = 0.0547
| Class C:nucleus | 60S RIBOSOMAL PROTEIN L4/L1 (RPL4A) |
AT1G07930 | PredictedAffinity Capture-MS | FSW = 0.2123
| Class C:nucleus | ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA |
AT3G44310 | PredictedPhenotypic Enhancement | FSW = 0.0104
| Class C:nucleus | NIT1 INDOLE-3-ACETONITRILE NITRILASE/ INDOLE-3-ACETONITRILE NITRILE HYDRATASE/ NITRILASE |
AT4G12610 | PredictedCo-purificationReconstituted Complex | FSW = 0.0531
| Class C:nucleus | TRANSCRIPTION INITIATION FACTOR IIF ALPHA SUBUNIT (TFIIF-ALPHA) FAMILY PROTEIN |
AT3G16950 | PredictedAffinity Capture-MS | FSW = 0.1635
| Class C:nucleus | LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE |
AT5G59690 | PredictedAffinity Capture-MS | FSW = 0.0721
| Class C:nucleus | HISTONE H4 |
AT5G65430 | PredictedPhenotypic EnhancementPhenotypic Enhancement | FSW = 0.1115
| Class C:nucleus | GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING |
AT1G55920 | PredictedPhenotypic Enhancement | FSW = 0.1656
| Class C:nucleus | ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE |
AT5G67630 | PredictedAffinity Capture-WesternReconstituted ComplexSynthetic Lethality | FSW = 0.0294
| Class C:nucleus | DNA HELICASE PUTATIVE |
AT5G22330 | PredictedReconstituted ComplexReconstituted ComplexAffinity Capture-Western | FSW = 0.0347
| Class C:nucleus | RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1) PROTEIN BINDING |
AT5G60390 | PredictedAffinity Capture-MS | FSW = 0.1407
| Class C:nucleus | ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA |
AT5G60540 | PredictedPhenotypic EnhancementSynthetic Lethality | FSW = 0.1441
| Class C:nucleus | PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION |
AT5G12250 | PredictedAffinity Capture-MS | FSW = 0.0110
| Class C:nucleus | TUB6 (BETA-6 TUBULIN) STRUCTURAL CONSTITUENT OF CYTOSKELETON |
AT2G33370 | PredictedAffinity Capture-MS | FSW = 0.0164
| Class C:nucleus | 60S RIBOSOMAL PROTEIN L23 (RPL23B) |
AT3G58680 | Predictedin vivoAffinity Capture-WesternReconstituted Complex | FSW = 0.0255
| Class C:nucleus | MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B) DNA BINDING / TRANSCRIPTION COACTIVATOR |
AT3G05530 | PredictedAffinity Capture-MSinteraction prediction | FSW = 0.0245
| Class C:nucleus | RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A) ATPASE/ CALMODULIN BINDING |
AT3G10330 | Predictedinterologs mappingReconstituted ComplexReconstituted ComplexReconstituted ComplexReconstituted ComplexReconstituted ComplexCo-purificationReconstituted ComplexReconstituted ComplexReconstituted ComplexCo-purificationSynthetic Lethalityinterologs mappingSynthetic Rescuetwo hybridfar western blottingCo-crystal Structureinteraction predictionEnriched domain pairGene neighbors methodCo-expression | FSW = 0.0525
| Class C:nucleus | TRANSCRIPTION INITIATION FACTOR IIB-2 / GENERAL TRANSCRIPTION FACTOR TFIIB-2 (TFIIB2) |
AT2G44680 | PredictedAffinity Capture-MSAffinity Capture-Western | FSW = 0.0421
| Class C:nucleus | CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE |
AT3G12480 | Predictedin vivoin vitroAffinity Capture-Westerninterologs mappingSynthetic Lethality | FSW = 0.0298
| Class C:nucleus | NF-YC11 (NUCLEAR FACTOR Y SUBUNIT C11) DNA BINDING / TRANSCRIPTION FACTOR |
AT4G21010 | Predictedin vitroin vitro | FSW = 0.0325
| Class C:nucleus | TRANSCRIPTION INITIATION FACTOR-RELATED |
AT1G17790 | PredictedAffinity Capture-WesternAffinity Capture-MS | FSW = 0.0626
| Class C:nucleus | DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN |
AT2G34450 | PredictedPhenotypic Enhancement | FSW = 0.1278
| Class C:nucleus | HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN |
AT3G54610 | Predictedsynthetic growth defectinterologs mappingAffinity Capture-MSSynthetic Lethality | FSW = 0.1187
| Class C:nucleus | GCN5 DNA BINDING / H3 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE |
AT5G59710 | Predictedinteraction prediction | FSW = 0.0289
| Class C:nucleus | VIP2 (VIRE2 INTERACTING PROTEIN2) PROTEIN BINDING / TRANSCRIPTION REGULATOR |
AT3G09360 | Predictedin vitroin vivoAffinity Capture-Westernin vivoin vitro | FSW = 0.0300
| Class C:nucleus | RNA POLYMERASE II TRANSCRIPTION FACTOR/ PROTEIN BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION REGULATOR/ TRANSLATION INITIATION FACTOR/ ZINC ION BINDING |
AT1G44900 | Predictedin vitro | FSW = 0.0098
| Class C:nucleus | ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE |
AT5G08190 | Predictedin vitrointerologs mapping | FSW = 0.0232
| Class C:nucleus | NF-YB12 (NUCLEAR FACTOR Y SUBUNIT B12) DNA BINDING / TRANSCRIPTION FACTOR |
AT5G16820 | Predictedin vitroin vivo | FSW = 0.0269
| Class C:nucleus | HSF3 (HEAT SHOCK FACTOR 3) DNA BINDING / TRANSCRIPTION FACTOR |
AT3G07260 | PredictedPhenotypic Enhancement | FSW = 0.0487
| Class C:nucleus | FORKHEAD-ASSOCIATED DOMAIN-CONTAINING PROTEIN / FHA DOMAIN-CONTAINING PROTEIN |
AT3G52250 | PredictedPhenotypic Suppression | FSW = 0.0930
| Class C:nucleus | DNA BINDING / TRANSCRIPTION FACTOR |
AT2G01280 | Predictedinteraction predictionEnriched domain pairCo-expression | FSW = 0.0198
| Class C:nucleus | MEE65 (MATERNAL EFFECT EMBRYO ARREST 65) RNA POLYMERASE II TRANSCRIPTION FACTOR/ CATIONCHLORIDE SYMPORTER |
AT2G24840 | Predictedinterologs mappingsynthetic growth defect | FSW = 0.0120
| Class C:nucleus | AGL61 (AGAMOUS-LIKE 61) DNA BINDING / TRANSCRIPTION FACTOR |
AT3G21540 | PredictedReconstituted ComplexReconstituted ComplexSynthetic LethalitySynthetic Rescue | FSW = 0.0455
| Class C:nucleus | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT1G02680 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-Westernin vitrotwo hybridAffinity Capture-WesternColocalization | FSW = 0.0864
| Class C:nucleus | TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR |
AT5G19310 | PredictedAffinity Capture-WesternSynthetic Lethalityinterologs mapping | FSW = 0.0610
| Class C:nucleus | HOMEOTIC GENE REGULATOR PUTATIVE |
AT3G54280 | PredictedAffinity Capture-MSColocalizationAffinity Capture-MSinterologs mappingAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-MSAffinity Capture-MSinterologs mappingSynthetic Lethalityinterologs mappingReconstituted ComplexReconstituted ComplexReconstituted ComplexReconstituted ComplexAffinity Capture-WesternReconstituted Complexin vivoin vitroAffinity Capture-Westerninterologs mappingSynthetic LethalitySynthetic RescueColocalizationCo-purificationinteraction prediction | FSW = 0.0566
| Class C:nucleus | RGD3 (ROOT GROWTH DEFECTIVE 3) ATP BINDING / DNA BINDING / BINDING / HELICASE/ NUCLEIC ACID BINDING |
AT5G59870 | PredictedAffinity Capture-MS | FSW = 0.2016
| Class C:nucleus | HTA6 DNA BINDING |
AT4G17020 | PredictedAffinity Capture-Westerninteraction prediction | FSW = 0.0299
| Class C:nucleus | TRANSCRIPTION FACTOR-RELATED |
AT5G47670 | Predictedin vivoin vitro | FSW = 0.0082
| Class C:nucleus | NF-YB6 (NUCLEAR FACTOR Y SUBUNIT B6) TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION ACTIVATOR BINDING / TRANSCRIPTION FACTOR |
AT4G10710 | Predictedinterologs mappingSynthetic Lethalitysynthetic growth defect | FSW = 0.0856
| Class C:nucleus | SPT16 (GLOBAL TRANSCRIPTION FACTOR C) |
AT5G44500 | PredictedAffinity Capture-MS | FSW = 0.1372
| Class C:nucleus | SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE |
AT5G08180 | PredictedAffinity Capture-MS | FSW = 0.0083
| Class C:nucleus | RIBOSOMAL PROTEIN L7AE/L30E/S12E/GADD45 FAMILY PROTEIN |
AT4G24440 | PredictedReconstituted ComplexReconstituted Complexinterologs mappinginterologs mappinginterologs mappingReconstituted ComplexReconstituted ComplexReconstituted ComplexReconstituted ComplexCo-crystal StructureCo-crystal StructureReconstituted ComplexReconstituted ComplexAffinity Capture-MSin vivoin vitroin vitroin vivoin vivoin vivoin vitroAffinity Capture-MSCo-crystal StructureReconstituted Complexinterologs mappinginteraction predictionEnriched domain pairCo-expression | FSW = 0.0693
| Class C:nucleus | TRANSCRIPTION INITIATION FACTOR IIA GAMMA CHAIN / TFIIA-GAMMA (TFIIA-S) |
AT1G18340 | PredictedCo-purification | FSW = 0.0300
| Class C:nucleus | BASAL TRANSCRIPTION FACTOR COMPLEX SUBUNIT-RELATED |
AT3G05060 | PredictedAffinity Capture-MS | FSW = 0.0128
| Class C:nucleus | SAR DNA-BINDING PROTEIN PUTATIVE |
AT1G17680 | PredictedReconstituted Complex | FSW = 0.0322
| Class C:nucleus | TRANSCRIPTION FACTOR-RELATED |
AT4G20810 | PredictedReconstituted ComplexCo-purificationin vitro | FSW = 0.0559
| Class C:nucleus | TRANSCRIPTION INITIATION FACTOR IIE (TFIIE) ALPHA SUBUNIT FAMILY PROTEIN / GENERAL TRANSCRIPTION FACTOR TFIIE FAMILY PROTEIN |
AT2G47620 | PredictedAffinity Capture-MS | FSW = 0.0310
| Class C:nucleus | ATSWI3A (SWITCH/SUCROSE NONFERMENTING 3A) DNA BINDING |
AT5G43840 | PredictedPhenotypic Enhancement | FSW = 0.0178
| Class C:nucleus | AT-HSFA6A DNA BINDING / TRANSCRIPTION FACTOR |
AT1G07480 | PredictedAffinity Capture-MSin vivo | FSW = 0.0474
| Class C:nucleus | TRANSCRIPTION FACTOR IIA LARGE SUBUNIT / TFIIA LARGE SUBUNIT (TFIIA-L) |
AT5G25150 | PredictedAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-MSAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-WesternAffinity Capture-Westernin vivoin vitroReconstituted Complexinteraction prediction | FSW = 0.0799
| Class C:nucleus | TAF5 (TBP-ASSOCIATED FACTOR 5) NUCLEOTIDE BINDING / TRANSCRIPTION REGULATOR |
AT4G20400 | PredictedReconstituted Complex | FSW = 0.0050
| Class C:nucleus | TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN |
AT1G07470 | PredictedReconstituted ComplexCo-crystal StructureCo-crystal StructureReconstituted ComplexReconstituted ComplexReconstituted Complexinterologs mappinginterologs mappingReconstituted ComplexReconstituted ComplexReconstituted ComplexCo-crystal StructureReconstituted ComplexReconstituted ComplexCo-crystal Structureinterologs mappinginterologs mappinginteraction predictionEnriched domain pair | FSW = 0.0563
| Class C:nucleus | TRANSCRIPTION FACTOR IIA LARGE SUBUNIT PUTATIVE / TFIIA LARGE SUBUNIT PUTATIVE |
AT2G13370 | PredictedSynthetic Rescue | FSW = 0.0663
| Class C:nucleus | CHR5 (CHROMATIN REMODELING 5) ATP BINDING / DNA BINDING / CHROMATIN BINDING / HELICASE/ NUCLEIC ACID BINDING |
AT2G37470 | PredictedAffinity Capture-MSAffinity Capture-MS | FSW = 0.1733
| Class C:nucleus | HISTONE H2B PUTATIVE |
AT2G38560 | PredictedSynthetic Lethality | FSW = 0.0392
| Class C:nucleus | TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION ELONGATION FACTOR/ TRANSCRIPTION FACTOR |
AT4G25340 | PredictedSynthetic LethalitySynthetic LethalityPhenotypic Enhancement | FSW = 0.1624
| Class C:nucleus | IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
AT4G39160 | Predictedinteraction prediction | FSW = 0.0492
| Class C:nucleus | DNA BINDING / TRANSCRIPTION FACTOR |
AT1G55520 | PredictedGene fusion methodPhylogenetic profile methodCo-expression | FSW = 0.2848
| Class C:nucleus | TBP2 (TATA BINDING PROTEIN 2) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TATA-BINDING PROTEIN BINDING |
AT4G32470 | PredictedAffinity Capture-MS | FSW = 0.1777
| Unknown | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE |
AT3G47520 | PredictedPhenotypic Enhancement | FSW = 0.0887
| Unknown | MDH (MALATE DEHYDROGENASE) L-MALATE DEHYDROGENASE/ BINDING / CATALYTIC/ MALATE DEHYDROGENASE/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR |
AT4G16660 | PredictedPhenotypic Enhancement | FSW = 0.1415
| Unknown | HEAT SHOCK PROTEIN 70 PUTATIVE / HSP70 PUTATIVE |
AT1G33140 | PredictedAffinity Capture-MSReconstituted Complex | FSW = 0.0260
| Unknown | PGY2 (PIGGYBACK2) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT1G20260 | PredictedPhenotypic Enhancement | FSW = 0.0492
| Unknown | HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM |
AT2G20450 | PredictedAffinity Capture-MS | FSW = 0.1558
| Unknown | 60S RIBOSOMAL PROTEIN L14 (RPL14A) |
AT2G37270 | Predictedinterologs mappingReconstituted Complexinterologs mappingPhenotypic SuppressionSynthetic Lethality | FSW = 0.0510
| Unknown | ATRPS5B (RIBOSOMAL PROTEIN 5B) STRUCTURAL CONSTITUENT OF RIBOSOME |
AT3G56190 | PredictedAffinity Capture-MS | FSW = 0.1405
| Unknown | ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN |
AT1G22780 | PredictedAffinity Capture-MS | FSW = 0.2093
| Unknown | PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME |
AT4G36750 | PredictedPhenotypic Enhancement | FSW = 0.0731
| Unknown | QUINONE REDUCTASE FAMILY PROTEIN |
AT3G08710 | PredictedPhenotypic Enhancement | FSW = 0.0764
| Unknown | ATH9 (THIOREDOXIN H-TYPE 9) |
AT2G45200 | PredictedAffinity Capture-Western | FSW = 0.0189
| Unknown | GOS12 (GOLGI SNARE 12) SNARE BINDING |
AT1G18070 | PredictedAffinity Capture-MS | FSW = 0.0207
| Unknown | EF-1-ALPHA-RELATED GTP-BINDING PROTEIN PUTATIVE |
AT3G62870 | PredictedSynthetic Lethality | FSW = 0.0735
| Unknown | 60S RIBOSOMAL PROTEIN L7A (RPL7AB) |
AT3G30390 | PredictedPhenotypic Suppression | FSW = 0.0571
| Unknown | AMINO ACID TRANSPORTER FAMILY PROTEIN |
AT5G07090 | PredictedPhenotypic Enhancement | FSW = 0.0256
| Unknown | 40S RIBOSOMAL PROTEIN S4 (RPS4B) |
AT3G08950 | PredictedAffinity Capture-MS | FSW = 0.1847
| Unknown | ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN |
AT2G19860 | PredictedAffinity Capture-MS | FSW = 0.1471
| Unknown | HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE |
AT1G65540 | PredictedAffinity Capture-Western | FSW = 0.0258
| Unknown | CALCIUM-BINDING EF HAND FAMILY PROTEIN |
AT1G15210 | PredictedAffinity Capture-MS | FSW = 0.1829
| Unknown | PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES |
AT3G08530 | PredictedAffinity Capture-MS | FSW = 0.0454
| Unknown | CLATHRIN HEAVY CHAIN PUTATIVE |
AT3G22890 | Predictedsynthetic growth defect | FSW = 0.0835
| Unknown | APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP) |
AT1G65240 | Predictedco-fractionationCo-fractionation | FSW = 0.0746
| Unknown | ASPARTYL PROTEASE FAMILY PROTEIN |
AT5G13050 | PredictedAffinity Capture-MS | FSW = 0.1697
| Unknown | 5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE |
AT1G56050 | PredictedPhenotypic Enhancement | FSW = 0.1258
| Unknown | GTP-BINDING PROTEIN-RELATED |
AT1G26160 | PredictedSynthetic Lethality | FSW = 0.0091
| Unknown | METAL-DEPENDENT PHOSPHOHYDROLASE HD DOMAIN-CONTAINING PROTEIN |
AT3G06040 | PredictedAffinity Capture-MS | FSW = 0.2219
| Unknown | RIBOSOMAL PROTEIN L12 FAMILY PROTEIN |
AT4G35800 | PredictedReconstituted ComplexCo-purificationReconstituted ComplexColocalization | FSW = 0.0489
| Unknown | NRPB1 (RNA POLYMERASE II LARGE SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE |
AT5G23710 | Predictedin vitro | FSW = 0.0137
| Unknown | DNA BINDING / DNA-DIRECTED RNA POLYMERASE |
AT5G58230 | PredictedAffinity Capture-Western | FSW = 0.0274
| Unknown | MSI1 (MULTICOPY SUPRESSOR OF IRA1) PROTEIN BINDING |
AT5G56030 | PredictedAffinity Capture-MS | FSW = 0.0128
| Unknown | HSP81-2 (HEAT SHOCK PROTEIN 81-2) ATP BINDING |
AT5G52640 | PredictedAffinity Capture-MS | FSW = 0.0269
| Unknown | ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING |
AT5G43370 | PredictedAffinity Capture-MS | FSW = 0.2041
| Unknown | APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER |
AT1G78000 | PredictedPhenotypic Enhancement | FSW = 0.0099
| Unknown | SULTR12 (SULFATE TRANSPORTER 12) SULFATE TRANSMEMBRANE TRANSPORTER |
AT2G32670 | PredictedPhenotypic Enhancement | FSW = 0.1572
| Unknown | ATVAMP725 |
AT5G03540 | PredictedAffinity Capture-WesternSynthetic LethalityReconstituted ComplexPhenotypic SuppressionSynthetic Rescue | FSW = 0.0687
| Unknown | ATEXO70A1 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1) PROTEIN BINDING |
AT1G22300 | PredictedAffinity Capture-MS | FSW = 0.0680
| Unknown | GRF10 (GENERAL REGULATORY FACTOR 10) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING |
AT1G76810 | Predictedtwo hybrid | FSW = 0.0117
| Unknown | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 FAMILY PROTEIN / EIF-2 FAMILY PROTEIN |
AT4G36860 | PredictedAffinity Capture-MS | FSW = 0.1788
| Unknown | ZINC ION BINDING |
AT5G19990 | PredictedReconstituted ComplexAffinity Capture-Westerninteraction prediction | FSW = 0.0488
| Unknown | RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A) ATPASE |
AT4G26110 | PredictedAffinity Capture-MS | FSW = 0.0247
| Unknown | NAP11 (NUCLEOSOME ASSEMBLY PROTEIN11) DNA BINDING |
AT5G26340 | PredictedPhenotypic Enhancement | FSW = 0.0451
| Unknown | MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER |
AT2G39480 | PredictedReconstituted Complex | FSW = 0.0842
| Unknown | PGP6 (P-GLYCOPROTEIN 6) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES |
AT2G37790 | PredictedPhenotypic Enhancement | FSW = 0.1052
| Unknown | ALDO/KETO REDUCTASE FAMILY PROTEIN |
AT1G09640 | PredictedAffinity Capture-MS | FSW = 0.1359
| Unknown | ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE |
AT4G18800 | PredictedPhenotypic Enhancement | FSW = 0.0932
| Unknown | ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING |
AT5G17550 | PredictedAffinity Capture-MS | FSW = 0.0043
| Unknown | PEX19-2 |
AT2G20510 | PredictedSynthetic Lethality | FSW = 0.0128
| Unknown | ATTIM44-1 PROTEIN-TRANSMEMBRANE TRANSPORTING ATPASE |
AT2G17270 | Predictedinterologs mapping | FSW = 0.0830
| Unknown | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN |
AT2G41380 | PredictedSynthetic LethalitySynthetic Lethality | FSW = 0.0312
| Unknown | EMBRYO-ABUNDANT PROTEIN-RELATED |
AT2G30160 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.1870
| Unknown | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN |
AT3G18480 | PredictedPhenotypic Enhancement | FSW = 0.0722
| Unknown | ATCASP (ARABIDOPSIS THALIANA CCAAT-DISPLACEMENT PROTEIN ALTERNATIVELY SPLICED PRODUCT) |
AT4G30990 | PredictedAffinity Capture-MS | FSW = 0.1251
| Unknown | BINDING |
AT2G13650 | PredictedAffinity Capture-MS | FSW = 0.1812
| Unknown | GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER |
AT5G24090 | PredictedSynthetic Lethality | FSW = 0.0519
| Unknown | ACIDIC ENDOCHITINASE (CHIB1) |
AT4G33730 | PredictedPhenotypic Enhancement | FSW = 0.0742
| Unknown | PATHOGENESIS-RELATED PROTEIN PUTATIVE |
AT5G02730 | PredictedPhenotypic Enhancement | FSW = 0.0462
| Unknown | ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN |
AT2G19980 | PredictedPhenotypic Enhancement | FSW = 0.0892
| Unknown | ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN |
AT3G54840 | PredictedPhenotypic Suppression | FSW = 0.1272
| Unknown | ARA6 GTP BINDING / GTPASE |
AT1G01020 | PredictedAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternReconstituted ComplexAffinity Capture-WesternReconstituted ComplexReconstituted ComplexReconstituted ComplexAffinity Capture-WesternCo-purificationSynthetic LethalitySynthetic Rescue | FSW = 0.0895
| Unknown | ARV1 |
AT3G07140 | PredictedPhenotypic Enhancement | FSW = 0.0822
| Unknown | GPI TRANSAMIDASE COMPONENT GPI16 SUBUNIT FAMILY PROTEIN |
AT2G38960 | PredictedPhenotypic Enhancement | FSW = 0.0077
| Unknown | AERO2 (ARABIDOPSIS ENDOPLASMIC RETICULUM OXIDOREDUCTINS 2) FAD BINDING / ELECTRON CARRIER/ OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS DISULFIDE AS ACCEPTOR / PROTEIN BINDING |
AT3G60360 | PredictedPhenotypic Enhancement | FSW = 0.1165
| Unknown | EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14) |
AT1G16190 | Predictedinteraction prediction | FSW = 0.0318
| Unknown | DNA REPAIR PROTEIN RAD23 PUTATIVE |
AT1G17810 | PredictedSynthetic Lethality | FSW = 0.0154
| Unknown | BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN) WATER CHANNEL |
AT3G52580 | PredictedAffinity Capture-MS | FSW = 0.2053
| Unknown | 40S RIBOSOMAL PROTEIN S14 (RPS14C) |
AT5G41480 | PredictedAffinity Capture-MS | FSW = 0.1351
| Unknown | GLA1 (GLOBULAR ARREST1) DIHYDROFOLATE SYNTHASE |
AT5G59180 | PredictedReconstituted Complex | FSW = 0.0146
| Unknown | NRPB7 DNA-DIRECTED RNA POLYMERASE/ RNA BINDING |
AT3G25980 | Predictedtwo hybrid | FSW = 0.0128
| Unknown | MITOTIC SPINDLE CHECKPOINT PROTEIN PUTATIVE (MAD2) |
AT4G16420 | PredictedSynthetic LethalitySynthetic LethalityAffinity Capture-MSAffinity Capture-WesternPhenotypic Enhancementinterologs mappinginteraction prediction | FSW = 0.2037
| Unknown | ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR |
AT4G39100 | PredictedPhenotypic Enhancement | FSW = 0.0541
| Unknown | SHL1 (SHORT LIFE) TRANSCRIPTION FACTOR/ ZINC-MEDIATED TRANSCRIPTIONAL ACTIVATOR |
AT5G09250 | Predictedin vitro | FSW = 0.0346
| Unknown | KIWI DNA BINDING / PROTEIN BINDING / TRANSCRIPTION COACTIVATOR |
AT3G12530 | PredictedAffinity Capture-MS | FSW = 0.1340
| Unknown | PSF2 |
AT2G05170 | PredictedPhenotypic Suppression | FSW = 0.0387
| Unknown | ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING |
AT2G24040 | PredictedAffinity Capture-MS | FSW = 0.2086
| Unknown | HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE |
AT2G29540 | PredictedPhenotypic Enhancement | FSW = 0.0722
| Unknown | ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT) DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION |
AT5G38470 | PredictedAffinity Capture-Western | FSW = 0.0362
| Unknown | DNA REPAIR PROTEIN RAD23 PUTATIVE |
AT5G47880 | PredictedAffinity Capture-MS | FSW = 0.2309
| Unknown | ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR |
AT4G17190 | PredictedPhenotypic Enhancement | FSW = 0.1061
| Unknown | FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE |
AT4G17760 | Predictedtwo hybrid | FSW = 0.0021
| Unknown | DAMAGED DNA BINDING / EXODEOXYRIBONUCLEASE III |
AT5G45330 | PredictedAffinity Capture-MS | FSW = 0.0038
| Unknown | UNKNOWN PROTEIN |
AT1G19485 | PredictedReconstituted Complex | FSW = 0.0208
| Unknown | AT HOOK MOTIF-CONTAINING PROTEIN |
AT1G53780 | Predictedin vivo | FSW = 0.0216
| Unknown | ATP BINDING / ATPASE/ HYDROLASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
AT1G54360 | PredictedAffinity Capture-Western | FSW = 0.0274
| Unknown | TAF6B4 (TBP-ASSOCIATED FACTOR 6B4) RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION INITIATION FACTOR |
AT1G55300 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternColocalizationPhenotypic Enhancement | FSW = 0.2377
| Unknown | TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR |
AT2G04690 | Predictedin vitro | FSW = 0.0115
| Unknown | CELLULAR REPRESSOR OF E1A-STIMULATED GENES (CREG) FAMILY |
AT1G01510 | PredictedReconstituted Complex | FSW = 0.0071
| Unknown | AN (ANGUSTIFOLIA) PROTEIN BINDING |
AT3G19040 | Predictedin vitrotwo hybrid | FSW = 0.0819
| Unknown | HAF2 (HISTONE ACETYLTRANSFERASE OF THE TAFII250 FAMILY 2) DNA BINDING / HISTONE ACETYLTRANSFERASE/ TRANSCRIPTION COFACTOR |
AT3G52270 | Predictedin vitro | FSW = 0.0347
| Unknown | ATP BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR |
AT4G11080 | Predictedin vivo | FSW = 0.0081
| Unknown | HIGH MOBILITY GROUP (HMG1/2) FAMILY PROTEIN |
AT5G13850 | Predictedin vivoin vitro | FSW = 0.0038
| Unknown | NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3) |
AT5G23420 | Predictedin vitro | FSW = 0.0088
| Unknown | HMGB6 TRANSCRIPTION FACTOR |
AT1G02080 | PredictedAffinity Capture-WesternSynthetic Rescue | FSW = 0.0540
| Unknown | TRANSCRIPTIONAL REGULATOR-RELATED |
AT1G04480 | PredictedAffinity Capture-MS | FSW = 0.0307
| Unknown | 60S RIBOSOMAL PROTEIN L23 (RPL23A) |
AT1G04950 | PredictedAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-MSAffinity Capture-WesternColocalizationinteraction prediction | FSW = 0.0913
| Unknown | TAF6 (TBP-ASSOCIATED FACTOR 6) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION INITIATION FACTOR |
AT1G07340 | PredictedPhenotypic Enhancement | FSW = 0.0291
| Unknown | ATSTP2 (SUGAR TRANSPORTER 2) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER |
AT1G07705 | PredictedAffinity Capture-Western | FSW = 0.0341
| Unknown | TRANSCRIPTION REGULATOR |
AT1G08260 | PredictedAffinity Capture-Westernfluorescence acceptor donor pairfluorescence acceptor donor pairPhenotypic Suppression | FSW = 0.0469
| Unknown | TIL1 (TILTED 1) DNA BINDING / DNA-DIRECTED DNA POLYMERASE/ NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING |
AT1G08880 | PredictedAffinity Capture-MS | FSW = 0.0533
| Unknown | H2AXA DNA BINDING |
AT1G09020 | PredictedSynthetic Rescue | FSW = 0.0099
| Unknown | SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4) PROTEIN KINASE ACTIVATOR |
AT1G12130 | PredictedPhenotypic EnhancementAffinity Capture-Western | FSW = 0.0669
| Unknown | FLAVIN-CONTAINING MONOOXYGENASE FAMILY PROTEIN / FMO FAMILY PROTEIN |
AT1G13580 | PredictedPhenotypic EnhancementSynthetic Lethality | FSW = 0.1115
| Unknown | LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3) |
AT1G16280 | PredictedAffinity Capture-MS | FSW = 0.0100
| Unknown | DEAD/DEAH BOX HELICASE PUTATIVE |
AT1G19750 | PredictedPhenotypic Enhancement | FSW = 0.0801
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT1G20693 | PredictedPhenotypic Enhancement | FSW = 0.1441
| Unknown | HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR |
AT1G23460 | PredictedPhenotypic Enhancement | FSW = 0.0907
| Unknown | POLYGALACTURONASE |
AT1G25155 | PredictedPhenotypic Enhancement | FSW = 0.0913
| Unknown | ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE |
AT1G26170 | Predictedinteraction predictionAffinity Capture-WesternAffinity Capture-MSAffinity Capture-WesternAffinity Capture-MSReconstituted Complexinterologs mapping | FSW = 0.0437
| Unknown | BINDING / PROTEIN TRANSPORTER |
AT1G27040 | PredictedPhenotypic Enhancement | FSW = 0.0569
| Unknown | NITRATE TRANSPORTER PUTATIVE |
AT1G31170 | PredictedPhenotypic Enhancement | FSW = 0.0782
| Unknown | SRX (SULFIREDOXIN) DNA BINDING / OXIDOREDUCTASE ACTING ON SULFUR GROUP OF DONORS |
AT1G32130 | PredictedSynthetic Rescue | FSW = 0.0377
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TFIIS N-TERMINAL (INTERPROIPR017923) IWS1 C-TERMINAL (INTERPROIPR008654) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS IWS1 C-TERMINUS FAMILY PROTEIN (TAIRAT4G190001) HAS 907 BLAST HITS TO 871 PROTEINS IN 182 SPECIES ARCHAE - 4 BACTERIA - 14 METAZOA - 417 FUNGI - 195 PLANTS - 42 VIRUSES - 8 OTHER EUKARYOTES - 227 (SOURCE NCBI BLINK) |
AT1G34340 | PredictedAffinity Capture-WesternAffinity Capture-Western | FSW = 0.0683
| Unknown | ESTERASE/LIPASE/THIOESTERASE FAMILY PROTEIN |
AT1G51770 | PredictedAffinity Capture-MS | FSW = 0.1836
| Unknown | UNKNOWN PROTEIN |
AT1G52500 | PredictedPhenotypic EnhancementPhenotypic Enhancement | FSW = 0.1329
| Unknown | ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE |
AT1G54140 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-WesternAffinity Capture-WesternColocalization | FSW = 0.0795
| Unknown | TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT) DNA BINDING / TRANSCRIPTION INITIATION FACTOR |
AT1G57620 | PredictedPhenotypic Enhancement | FSW = 0.0410
| Unknown | EMP24/GP25L/P24 FAMILY PROTEIN |
AT1G61040 | PredictedSynthetic RescueSynthetic Rescue | FSW = 0.0312
| Unknown | VIP5 (VERNALIZATION INDEPENDENCE 5) DNA BINDING |
AT1G62880 | PredictedAffinity Capture-MS | FSW = 0.1704
| Unknown | CORNICHON FAMILY PROTEIN |
AT1G66740 | PredictedAffinity Capture-Westerninterologs mapping | FSW = 0.0642
| Unknown | SGA2 |
AT1G68020 | PredictedPhenotypic Enhancement | FSW = 0.0853
| Unknown | ATTPS6 ALPHAALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)/ TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE |
AT1G71280 | PredictedAffinity Capture-MS | FSW = 0.1561
| Unknown | DEAD/DEAH BOX HELICASE PUTATIVE |
AT1G73960 | PredictedAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-MSAffinity Capture-MSAffinity Capture-WesternAffinity Capture-Western | FSW = 0.0836
| Unknown | TAF2 (TBP-ASSOCIATED FACTOR 2) METALLOPEPTIDASE/ ZINC ION BINDING |
AT1G76920 | PredictedPhenotypic Enhancement | FSW = 0.0929
| Unknown | F-BOX FAMILY PROTEIN (FBX3) |
AT1G78770 | PredictedPhenotypic Enhancement | FSW = 0.0969
| Unknown | CELL DIVISION CYCLE FAMILY PROTEIN |
AT2G15910 | PredictedPhenotypic Enhancement | FSW = 0.0738
| Unknown | CSL ZINC FINGER DOMAIN-CONTAINING PROTEIN |
AT2G21890 | PredictedPhenotypic Suppression | FSW = 0.0299
| Unknown | CAD3 (CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 3) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING |
AT2G24960 | PredictedPhenotypic EnhancementPhenotypic Enhancement | FSW = 0.1023
| Unknown | UNKNOWN PROTEIN |
AT2G29190 | PredictedPhenotypic Enhancement | FSW = 0.0487
| Unknown | APUM2 (ARABIDOPSIS PUMILIO 2) RNA BINDING / BINDING |
AT2G29390 | PredictedAffinity Capture-MS | FSW = 0.1951
| Unknown | SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE |
AT2G32765 | PredictedPhenotypic Enhancement | FSW = 0.0291
| Unknown | SUMO5 (SMALL UBIQUITINRELATED MODIFIER 5) PROTEIN TAG |
AT2G34750 | PredictedPhenotypic Enhancement | FSW = 0.0886
| Unknown | RNA POLYMERASE I SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3 FAMILY PROTEIN |
AT2G37420 | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.2168
| Unknown | KINESIN MOTOR PROTEIN-RELATED |
AT2G46280 | Predictedinterologs mappingSynthetic Lethality | FSW = 0.0182
| Unknown | TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1) NUCLEOTIDE BINDING / PROTEIN BINDING |
AT2G46860 | PredictedAffinity Capture-MS | FSW = 0.1743
| Unknown | ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE |
AT2G47420 | PredictedAffinity Capture-MS | FSW = 0.0182
| Unknown | DIMETHYLADENOSINE TRANSFERASE PUTATIVE |
AT3G06470 | PredictedPhenotypic Enhancement | FSW = 0.0418
| Unknown | GNS1/SUR4 MEMBRANE FAMILY PROTEIN |
AT3G06483 | PredictedPhenotypic Enhancement | FSW = 0.0855
| Unknown | PDK (PYRUVATE DEHYDROGENASE KINASE) ATP BINDING / HISTIDINE PHOSPHOTRANSFER KINASE/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING) KINASE |
AT3G09800 | PredictedPhenotypic Suppression | FSW = 0.0692
| Unknown | PROTEIN BINDING |
AT3G10070 | PredictedAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-MSAffinity Capture-WesternAffinity Capture-MSAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternAffinity Capture-WesternColocalizationReconstituted Complex | FSW = 0.0735
| Unknown | TAF12 (TBP-ASSOCIATED FACTOR 12) DNA BINDING / TRANSCRIPTION INITIATION FACTOR |
AT3G12490 | PredictedAffinity Capture-Westernco-fractionationCo-fractionationinterologs mapping | FSW = 0.0816
| Unknown | CYSTEINE PROTEASE INHIBITOR PUTATIVE / CYSTATIN PUTATIVE |
AT3G13210 | PredictedPhenotypic Enhancement | FSW = 0.0391
| Unknown | CROOKED NECK PROTEIN PUTATIVE / CELL CYCLE PROTEIN PUTATIVE |
AT1G05650 | PredictedAffinity Capture-MS | FSW = 0.1571
| Unknown | POLYGALACTURONASE PUTATIVE / PECTINASE PUTATIVE |
AT1G09270 | PredictedPhenotypic Enhancement | FSW = 0.0383
| Unknown | IMPA-4 (IMPORTIN ALPHA ISOFORM 4) BINDING / PROTEIN TRANSPORTER |
AT1G15440 | PredictedSynthetic LethalitySynthetic Lethality | FSW = 0.0515
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT1G15780 | Predictedtwo hybrid | FSW = 0.0525
| Unknown | UNKNOWN PROTEIN |
AT1G20696 | PredictedAffinity Capture-MS | FSW = 0.1800
| Unknown | HMGB3 (HIGH MOBILITY GROUP B 3) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR |
AT1G21370 | PredictedPhenotypic Enhancement | FSW = 0.0638
| Unknown | UNKNOWN PROTEIN |
AT1G26320 | PredictedPhenotypic Suppression | FSW = 0.0862
| Unknown | NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE |
AT1G29970 | PredictedPhenotypic Enhancement | FSW = 0.0620
| Unknown | RPL18AA (60S RIBOSOMAL PROTEIN L18A-1) |
AT1G33110 | PredictedAffinity Capture-MS | FSW = 0.2187
| Unknown | MATE EFFLUX FAMILY PROTEIN |
AT1G34580 | PredictedAffinity Capture-MS | FSW = 0.1453
| Unknown | MONOSACCHARIDE TRANSPORTER PUTATIVE |
AT1G52740 | PredictedAffinity Capture-Western | FSW = 0.0751
| Unknown | HTA9 (HISTONE H2A PROTEIN 9) DNA BINDING |
AT1G73810 | Predictedinterologs mapping | FSW = 0.0541
| Unknown | UNKNOWN PROTEIN |
AT1G76720 | PredictedAffinity Capture-MS | FSW = 0.2197
| Unknown | GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR |
AT2G01070 | PredictedAffinity Capture-WesternAffinity Capture-WesternCo-purification | FSW = 0.0424
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM INTEGRAL TO MEMBRANE EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G724801) HAS 500 BLAST HITS TO 499 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 271 FUNGI - 99 PLANTS - 97 VIRUSES - 0 OTHER EUKARYOTES - 33 (SOURCE NCBI BLINK) |
AT2G03130 | PredictedPhenotypic Enhancement | FSW = 0.1804
| Unknown | RIBOSOMAL PROTEIN L12 FAMILY PROTEIN |
AT2G23070 | PredictedAffinity Capture-Westernbiochemical | FSW = 0.0805
| Unknown | CASEIN KINASE II ALPHA CHAIN PUTATIVE |
AT3G11240 | PredictedPhenotypic Enhancement | FSW = 0.0855
| Unknown | ATE2 (ARGININE-TRNA PROTEIN TRANSFERASE 2) ARGINYLTRANSFERASE |
AT3G11290 | PredictedPhenotypic Enhancement | FSW = 0.0318
| Unknown | UNKNOWN PROTEIN |
AT3G12690 | PredictedAffinity Capture-MS | FSW = 0.1815
| Unknown | AGC15 (AGC KINASE 15) KINASE |
AT3G22590 | Predictedtwo hybridco-fractionationCo-fractionation | FSW = 0.0544
| Unknown | RNA POL II ACCESSORY FACTOR CDC73 FAMILY PROTEIN |
AT3G23570 | PredictedAffinity Capture-MS | FSW = 0.1269
| Unknown | DIENELACTONE HYDROLASE FAMILY PROTEIN |
AT3G45630 | PredictedReconstituted Complex | FSW = 0.0691
| Unknown | RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN |
AT3G47120 | Predictedinteraction predictiontwo hybridAffinity Capture-Westerninterologs mapping | FSW = 0.0264
| Unknown | RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN |
AT3G48780 | PredictedAffinity Capture-MS | FSW = 0.0247
| Unknown | SPT1 (SERINE PALMITOYLTRANSFERASE 1) SERINE C-PALMITOYLTRANSFERASE |
AT3G52390 | PredictedAffinity Capture-MS | FSW = 0.1724
| Unknown | TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN |
AT3G58560 | Predictedinterologs mappingSynthetic RescueSynthetic Lethality | FSW = 0.0314
| Unknown | ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN |
AT4G02120 | PredictedAffinity Capture-Westerninterologs mapping | FSW = 0.0709
| Unknown | CTP SYNTHASE PUTATIVE / UTP--AMMONIA LIGASE PUTATIVE |
AT4G17770 | PredictedAffinity Capture-MS | FSW = 0.1936
| Unknown | ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE |
AT4G21480 | PredictedPhenotypic Enhancement | FSW = 0.0230
| Unknown | CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER |
AT4G24040 | PredictedPhenotypic Enhancement | FSW = 0.0997
| Unknown | TRE1 (TREHALASE 1) ALPHAALPHA-TREHALASE/ TREHALASE |
AT4G26510 | PredictedAffinity Capture-WesternAffinity Capture-WesternPhenotypic EnhancementReconstituted Complex | FSW = 0.0594
| Unknown | ATP BINDING / KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / URACIL PHOSPHORIBOSYLTRANSFERASE |
AT4G27130 | PredictedSynthetic Lethality | FSW = 0.1041
| Unknown | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE |
AT4G34340 | PredictedAffinity Capture-WesternAffinity Capture-MSAffinity Capture-MSColocalization | FSW = 0.0649
| Unknown | TAF8 (TBP-ASSOCIATED FACTOR 8) DNA BINDING |
AT4G38250 | PredictedPhenotypic Suppression | FSW = 0.0558
| Unknown | AMINO ACID TRANSPORTER FAMILY PROTEIN |
AT4G38630 | Predictedco-fractionationCo-fractionation | FSW = 0.0265
| Unknown | RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR |
AT5G06600 | PredictedPhenotypic Suppression | FSW = 0.0614
| Unknown | UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE |
AT5G08160 | PredictedSynthetic Lethality | FSW = 0.0021
| Unknown | ATPK3 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G09390 | PredictedAffinity Capture-MS | FSW = 0.1746
| Unknown | CD2-BINDING PROTEIN-RELATED |
AT5G13840 | PredictedPhenotypic Enhancement | FSW = 0.0210
| Unknown | FZR3 (FIZZY-RELATED 3) SIGNAL TRANSDUCER |
AT5G14060 | PredictedSynthetic LethalitySynthetic Lethality | FSW = 0.2040
| Unknown | CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE |
AT5G18230 | PredictedAffinity Capture-Westerninteraction prediction | FSW = 0.0744
| Unknown | TRANSCRIPTION REGULATOR NOT2/NOT3/NOT5 FAMILY PROTEIN |
AT5G19660 | PredictedAffinity Capture-MS | FSW = 0.1761
| Unknown | S1P (SITE-1 PROTEASE) ENDOPEPTIDASE/ SERINE-TYPE ENDOPEPTIDASE |
AT5G41190 | PredictedAffinity Capture-MS | FSW = 0.1555
| Unknown | FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK) |
AT5G42720 | PredictedPhenotypic Enhancement | FSW = 0.1107
| Unknown | GLYCOSYL HYDROLASE FAMILY 17 PROTEIN |
AT5G46280 | PredictedSynthetic Lethality | FSW = 0.0469
| Unknown | DNA REPLICATION LICENSING FACTOR PUTATIVE |
AT5G52200 | PredictedPhenotypic EnhancementSynthetic Lethality | FSW = 0.0450
| Unknown | UNKNOWN PROTEIN |
AT5G54940 | PredictedPhenotypic Enhancement | FSW = 0.0475
| Unknown | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE |
AT5G67540 | PredictedPhenotypic Enhancement | FSW = 0.0551
| Unknown | GLYCOSYL HYDROLASE FAMILY PROTEIN 43 |
AT3G16840 | PredictedAffinity Capture-MS | FSW = 0.0269
| Unknown | ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ NUCLEIC ACID BINDING |
AT3G17630 | PredictedAffinity Capture-Western | FSW = 0.0257
| Unknown | ATCHX19 (CATION/H+ EXCHANGER 19) MONOVALENT CATIONPROTON ANTIPORTER/ SODIUMHYDROGEN ANTIPORTER |
AT3G29070 | Predictedinterologs mapping | FSW = 0.0170
| Unknown | PROTEIN TRANSMEMBRANE TRANSPORTER |
AT4G04695 | PredictedPhenotypic Enhancement | FSW = 0.0644
| Unknown | CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE |
AT4G13020 | PredictedPhenotypic Suppression | FSW = 0.0792
| Unknown | MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT4G16710 | PredictedPhenotypic Enhancement | FSW = 0.0625
| Unknown | GLYCOSYLTRANSFERASE FAMILY PROTEIN 28 |
AT4G19006 | PredictedAffinity Capture-MSinteraction prediction | FSW = 0.0180
| Unknown | 26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9) |
AT4G19560 | PredictedPhenotypic Enhancement | FSW = 0.0531
| Unknown | CYCT12 CYCLIN-DEPENDENT PROTEIN KINASE |
AT4G22140 | PredictedAffinity Capture-MSAffinity Capture-Western | FSW = 0.0526
| Unknown | DNA BINDING / PROTEIN BINDING / ZINC ION BINDING |
AT4G22330 | PredictedPhenotypic Enhancement | FSW = 0.0289
| Unknown | ATCES1 CATALYTIC/ HYDROLASE ACTING ON CARBON-NITROGEN (BUT NOT PEPTIDE) BONDS IN LINEAR AMIDES |
AT4G22753 | PredictedAffinity Capture-MS | FSW = 0.0255
| Unknown | SMO1-3 (STEROL 4-ALPHA METHYL OXIDASE 1-3) 44-DIMETHYL-9BETA19-CYCLOPROPYLSTEROL-4ALPHA-METHYL OXIDASE/ CATALYTIC |
AT4G34490 | PredictedAffinity Capture-MS | FSW = 0.0035
| Unknown | ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1) ACTIN BINDING |
AT4G36080 | PredictedAffinity Capture-MS | FSW = 0.0716
| Unknown | FAT DOMAIN-CONTAINING PROTEIN / PHOSPHATIDYLINOSITOL 3- AND 4-KINASE FAMILY PROTEIN |
AT5G01770 | PredictedPhenotypic Enhancement | FSW = 0.0532
| Unknown | RAPTOR2 (RAPTOR2) BINDING / NUCLEOTIDE BINDING |
AT5G11570 | PredictedAffinity Capture-Westernfluorescence acceptor donor pairfluorescence acceptor donor pair | FSW = 0.0795
| Unknown | PROTON-DEPENDENT OLIGOPEPTIDE TRANSPORT (POT) FAMILY PROTEIN |
AT5G19820 | PredictedAffinity Capture-WesternAffinity Capture-MSinteraction prediction | FSW = 0.1001
| Unknown | EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE |
AT5G24840 | PredictedPhenotypic Enhancement | FSW = 0.0365
| Unknown | TRNA (GUANINE-N7-)-METHYLTRANSFERASE |
AT5G39500 | PredictedPhenotypic Suppression | FSW = 0.0091
| Unknown | PATTERN FORMATION PROTEIN PUTATIVE |
AT5G45620 | PredictedPhenotypic Enhancement | FSW = 0.1033
| Unknown | 26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9) |
AT5G61010 | PredictedPhenotypic Enhancement | FSW = 0.0345
| Unknown | ATEXO70E2 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2) PROTEIN BINDING |
AT5G63670 | PredictedAffinity Capture-MS | FSW = 0.0423
| Unknown | SPT42 (SPT4 HOMOLOG 2) POSITIVE TRANSCRIPTION ELONGATION FACTOR/ ZINC ION BINDING |
AT2G10440 | Predictedinteraction prediction | FSW = 0.0711
| Unknown | UNKNOWN PROTEIN |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454