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AT3G25980 - ( mitotic spindle checkpoint protein putative (MAD2) )

143 Proteins interacs with AT3G25980

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G33560	Experimental two hybrid protein complementation assay	FSW = 0.1703	Unknown	SPINDLE CHECKPOINT PROTEIN-RELATED
AT3G19590	Experimental two hybrid protein complementation assay	FSW = 0.0175	Unknown	WD-40 REPEAT FAMILY PROTEIN / MITOTIC CHECKPOINT PROTEIN PUTATIVE
AT1G20010	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0775	Unknown	TUB5 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT3G04120	Predicted Synthetic Lethality	FSW = 0.0143	Unknown	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1) GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE (PHOSPHORYLATING)/ GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE
AT1G61000	Predicted Colocalization	FSW = 0.0481	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN MITOSIS LOCATED IN PLASMA MEMBRANE EXPRESSED IN CULTURED CELL CONTAINS INTERPRO DOMAIN/S KINETOCHORE PROTEIN NUF2 (INTERPROIPR005549) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS MYOSIN HEAVY CHAIN-RELATED (TAIRAT1G643301) HAS 41010 BLAST HITS TO 23184 PROTEINS IN 1264 SPECIES ARCHAE - 616 BACTERIA - 3998 METAZOA - 20566 FUNGI - 2893 PLANTS - 1316 VIRUSES - 149 OTHER EUKARYOTES - 11472 (SOURCE NCBI BLINK)
AT3G12580	Predicted two hybrid two hybrid	FSW = 0.0180	Unknown	HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING
AT1G02130	Predicted biochemical	FSW = 0.0059	Unknown	ARA-5 (ARABIDOPSIS RAS 5) GTP BINDING
AT5G50850	Predicted two hybrid	FSW = 0.0101	Unknown	MAB1 (MACCI-BOU) CATALYTIC/ PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING)
AT5G11980	Predicted two hybrid two hybrid Co-expression	FSW = 0.0223	Unknown	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT-RELATED / COG COMPLEX COMPONENT-RELATED
AT4G01610	Predicted two hybrid	FSW = 0.0111	Unknown	CATHEPSIN B-LIKE CYSTEINE PROTEASE PUTATIVE
AT3G60840	Predicted Synthetic Lethality	FSW = 0.1451	Unknown	MAP65-4 (MICROTUBULE-ASSOCIATED PROTEIN 65-4)
AT5G19740	Predicted Phenotypic Enhancement	FSW = 0.0674	Unknown	PEPTIDASE M28 FAMILY PROTEIN
AT4G16210	Predicted two hybrid	FSW = 0.0072	Unknown	ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A) CATALYTIC
AT4G37930	Predicted Synthetic Lethality	FSW = 0.0091	Unknown	SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1) GLYCINE HYDROXYMETHYLTRANSFERASE/ POLY(U) BINDING
AT3G12780	Predicted Affinity Capture-MS	FSW = 0.0124	Unknown	PGK1 (PHOSPHOGLYCERATE KINASE 1) PHOSPHOGLYCERATE KINASE
AT1G74030	Predicted Affinity Capture-MS	FSW = 0.0173	Unknown	ENOLASE PUTATIVE
AT5G59690	Predicted Phenotypic Enhancement	FSW = 0.0314	Unknown	HISTONE H4
AT3G13930	Predicted two hybrid	FSW = 0.0204	Unknown	DIHYDROLIPOAMIDE S-ACETYLTRANSFERASE PUTATIVE
AT5G58470	Predicted two hybrid Co-expression	FSW = 0.0206	Unknown	TAF15B (TBP-ASSOCIATED FACTOR 15B) BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING / ZINC ION BINDING
AT1G71440	Predicted interaction prediction Synthetic Lethality synthetic growth defect Phenotypic Enhancement Co-expression	FSW = 0.1455	Unknown	PFI (PFIFFERLING)
AT1G77550	Predicted two hybrid two hybrid Co-expression	FSW = 0.0070	Unknown	PROTEIN BINDING / TUBULIN-TYROSINE LIGASE
AT5G06680	Predicted Affinity Capture-Western	FSW = 0.0353	Unknown	SPC98 (SPINDLE POLE BODY COMPONENT 98) TUBULIN BINDING
AT5G12250	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0797	Unknown	TUB6 (BETA-6 TUBULIN) STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT3G61650	Predicted Synthetic Lethality Colocalization	FSW = 0.1280	Unknown	TUBG1 (GAMMA-TUBULIN) GTP BINDING / GTPASE/ STRUCTURAL MOLECULE
AT5G13300	Predicted two hybrid	FSW = 0.0120	Unknown	SFC (SCARFACE) ARF GTPASE ACTIVATOR/ PHOSPHOINOSITIDE BINDING
AT5G52640	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.0312	Unknown	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G11960	Predicted Synthetic Lethality	FSW = 0.0309	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN PLASMA MEMBRANE EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF221 (INTERPROIPR003864) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED (TAIRAT1G623201) HAS 746 BLAST HITS TO 706 PROTEINS IN 111 SPECIES ARCHAE - 0 BACTERIA - 4 METAZOA - 131 FUNGI - 370 PLANTS - 224 VIRUSES - 0 OTHER EUKARYOTES - 17 (SOURCE NCBI BLINK)
AT5G02490	Predicted two hybrid	FSW = 0.0044	Unknown	HEAT SHOCK COGNATE 70 KDA PROTEIN 2 (HSC70-2) (HSP70-2)
AT1G79930	Predicted Synthetic Lethality	FSW = 0.0228	Unknown	HSP91 ATP BINDING
AT1G16970	Predicted Synthetic Rescue Co-expression	FSW = 0.0342	Unknown	KU70 (ARABIDOPSIS THALIANA KU70 HOMOLOG) DOUBLE-STRANDED DNA BINDING / PROTEIN BINDING
AT3G12050	Predicted two hybrid interaction prediction	FSW = 0.0156	Unknown	AHA1 DOMAIN-CONTAINING PROTEIN
AT1G76150	Predicted two hybrid two hybrid	FSW = 0.0274	Unknown	MAOC-LIKE DEHYDRATASE DOMAIN-CONTAINING PROTEIN
AT4G32830	Predicted two hybrid	FSW = 0.0166	Unknown	ATAUR1 (ATAURORA1) HISTONE KINASE(H3-S10 SPECIFIC) / KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G27310	Predicted Synthetic Lethality	FSW = 0.0052	Unknown	NTF2A (NUCLEAR TRANSPORT FACTOR 2A) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT4G05190	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Co-expression	FSW = 0.1810	Unknown	ATK5 (ARABIDOPSIS THALIANA KINESIN 5) MICROTUBULE MOTOR
AT5G67270	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.1457	Unknown	ATEB1C (MICROTUBULE END BINDING PROTEIN 1) MICROTUBULE BINDING
AT3G12810	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1027	Unknown	PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G43810	Predicted Phenotypic Enhancement	FSW = 0.0368	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN F PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE / SM PROTEIN F PUTATIVE
AT1G02680	Predicted Phenotypic Suppression	FSW = 0.0319	Unknown	TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT2G12940	Predicted two hybrid	FSW = 0.0274	Unknown	UNE4 (UNFERTILIZED EMBRYO SAC 4) TRANSCRIPTION FACTOR
AT2G38810	Predicted interaction prediction Co-expression	FSW = 0.0947	Unknown	HTA8 (HISTONE H2A 8) DNA BINDING
AT3G13445	Predicted two hybrid	FSW = 0.0128	Unknown	TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT4G20440	Predicted two hybrid two hybrid Co-expression	FSW = 0.0061	Unknown	SMB (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B)
AT5G44500	Predicted two hybrid	FSW = 0.0051	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT2G35670	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.0828	Unknown	FIS2 (FERTILIZATION INDEPENDENT SEED 2) TRANSCRIPTION FACTOR
AT1G20140	Predicted Synthetic Lethality	FSW = 0.0100	Unknown	ASK4 (ARABIDOPSIS SKP1-LIKE 4) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT3G61890	Predicted two hybrid	FSW = 0.0061	Unknown	ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX 12) TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR
AT2G18760	Predicted Synthetic Lethality	FSW = 0.0092	Unknown	CHR8 (CHROMATIN REMODELING 8) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G36740	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.0748	Unknown	SWC2 DNA BINDING / TRANSCRIPTION FACTOR
AT4G27680	Predicted Synthetic Rescue	FSW = 0.0074	Unknown	MSP1 PROTEIN PUTATIVE / INTRAMITOCHONDRIAL SORTING PROTEIN PUTATIVE
AT2G38670	Predicted two hybrid	FSW = 0.0129	Unknown	PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1) ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
AT5G26780	Predicted Synthetic Lethality	FSW = 0.0180	Unknown	SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2) CATALYTIC/ GLYCINE HYDROXYMETHYLTRANSFERASE/ PYRIDOXAL PHOSPHATE BINDING
AT3G06540	Predicted biochemical	FSW = 0.0320	Unknown	GDP DISSOCIATION INHIBITOR FAMILY PROTEIN / RAB GTPASE ACTIVATOR FAMILY PROTEIN
AT1G14690	Predicted Synthetic Lethality	FSW = 0.1230	Unknown	MAP65-7 (MICROTUBULE-ASSOCIATED PROTEIN 65-7)
AT3G47690	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality	FSW = 0.1184	Unknown	ATEB1A MICROTUBULE BINDING
AT2G35630	Predicted Synthetic Rescue	FSW = 0.1041	Unknown	MOR1 (MICROTUBULE ORGANIZATION 1) MICROTUBULE BINDING
AT5G41150	Predicted synthetic growth defect	FSW = 0.0155	Unknown	UVH1 (ULTRAVIOLET HYPERSENSITIVE 1) SINGLE-STRANDED DNA SPECIFIC ENDODEOXYRIBONUCLEASE
AT1G16190	Predicted Synthetic Lethality	FSW = 0.0213	Unknown	DNA REPAIR PROTEIN RAD23 PUTATIVE
AT5G38470	Predicted Synthetic Lethality	FSW = 0.0303	Unknown	DNA REPAIR PROTEIN RAD23 PUTATIVE
AT1G71230	Predicted two hybrid two hybrid two hybrid Co-expression	FSW = 0.0072	Unknown	CSN5B (COP9-SIGNALOSOME 5B) PROTEIN BINDING
AT5G40820	Predicted Phenotypic Suppression	FSW = 0.0661	Unknown	ATRAD3 BINDING / INOSITOL OR PHOSPHATIDYLINOSITOL KINASE/ PHOSPHOTRANSFERASE ALCOHOL GROUP AS ACCEPTOR / PROTEIN SERINE/THREONINE KINASE
AT2G42120	Predicted Phenotypic Enhancement	FSW = 0.0222	Unknown	POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT) DNA BINDING / DNA-DIRECTED DNA POLYMERASE
AT3G05210	Predicted Synthetic Lethality	FSW = 0.0317	Unknown	ERCC1 5-FLAP ENDONUCLEASE
AT2G36200	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality	FSW = 0.1919	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT3G59970	Predicted two hybrid	FSW = 0.0072	Unknown	MTHFR1 (METHYLENETETRAHYDROFOLATE REDUCTASE 1) METHYLENETETRAHYDROFOLATE REDUCTASE (NADPH)
AT4G03020	Predicted two hybrid	FSW = 0.0071	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT4G35410	Predicted two hybrid	FSW = 0.0122	Unknown	CLATHRIN ADAPTOR COMPLEX SMALL CHAIN FAMILY PROTEIN
AT5G12410	Predicted two hybrid	FSW = 0.0048	Unknown	THUMP DOMAIN-CONTAINING PROTEIN
AT1G29220	Predicted two hybrid two hybrid	FSW = 0.0219	Unknown	TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN
AT1G31870	Predicted two hybrid two hybrid	FSW = 0.0336	Unknown	UNKNOWN PROTEIN
AT2G21270	Predicted two hybrid two hybrid	FSW = 0.0058	Unknown	UBIQUITIN FUSION DEGRADATION UFD1 FAMILY PROTEIN
AT4G24740	Predicted two hybrid	FSW = 0.0197	Unknown	AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 2) KINASE/ PROTEIN KINASE
AT4G29020	Predicted two hybrid	FSW = 0.0052	Unknown	GLYCINE-RICH PROTEIN
AT4G32660	Predicted two hybrid	FSW = 0.0192	Unknown	AME3 ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G38930	Predicted two hybrid	FSW = 0.0117	Unknown	UBIQUITIN FUSION DEGRADATION UFD1 FAMILY PROTEIN
AT5G25060	Predicted two hybrid	FSW = 0.0073	Unknown	RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT5G61980	Predicted two hybrid	FSW = 0.0106	Unknown	AGD1 (ARF-GAP DOMAIN 1) ARF GTPASE ACTIVATOR/ PROTEIN BINDING / ZINC ION BINDING
AT5G63010	Predicted two hybrid two hybrid	FSW = 0.0148	Unknown	WD-40 REPEAT FAMILY PROTEIN
AT1G67500	Predicted two hybrid in vitro	FSW = 0.0426	Unknown	ATREV3 (ARABIDOPSIS THALIANA RECOVERY PROTEIN 3) DNA BINDING / DNA-DIRECTED DNA POLYMERASE
AT1G78770	Predicted Synthetic Rescue in vivo in vitro Affinity Capture-Western Co-expression	FSW = 0.0293	Unknown	CELL DIVISION CYCLE FAMILY PROTEIN
AT2G20000	Predicted Affinity Capture-Western in vivo Affinity Capture-MS Co-expression	FSW = 0.0520	Unknown	HBT (HOBBIT) BINDING
AT3G16320	Predicted in vivo Affinity Capture-MS	FSW = 0.0683	Unknown	CDC27A BINDING
AT3G54630	Predicted in vivo Affinity Capture-MS Co-expression	FSW = 0.0092	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 11 PLANT STRUCTURES EXPRESSED DURING 6 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S KINETOCHORE PROTEIN NDC80 (INTERPROIPR005550) HAS 19800 BLAST HITS TO 12108 PROTEINS IN 845 SPECIES ARCHAE - 345 BACTERIA - 1709 METAZOA - 11031 FUNGI - 1499 PLANTS - 797 VIRUSES - 39 OTHER EUKARYOTES - 4380 (SOURCE NCBI BLINK)
AT4G33270	Predicted Affinity Capture-Western Reconstituted Complex two hybrid Affinity Capture-Western Affinity Capture-Western in vitro in vitro in vitro in vitro in vivo in vivo in vivo in vivo in vivo in vitro Affinity Capture-MS Affinity Capture-Western two hybrid Co-crystal Structure Reconstituted Complex	FSW = 0.0702	Unknown	CDC201 SIGNAL TRANSDUCER
AT5G27080	Predicted Affinity Capture-Western in vitro in vitro in vitro in vitro in vivo in vivo in vivo in vivo in vivo in vitro Affinity Capture-MS Affinity Capture-Western two hybrid Co-crystal Structure Reconstituted Complex	FSW = 0.0581	Unknown	WD-40 REPEAT FAMILY PROTEIN
AT5G49880	Predicted two hybrid in vivo in vitro Affinity Capture-MS Reconstituted Complex Enriched domain pair Co-expression	FSW = 0.0163	Unknown	MITOTIC CHECKPOINT FAMILY PROTEIN
AT1G03150	Predicted Synthetic Lethality	FSW = 0.0055	Unknown	GCN5-RELATED N-ACETYLTRANSFERASE (GNAT) FAMILY PROTEIN
AT1G04730	Predicted Synthetic Lethality Synthetic Lethality synthetic growth defect Phenotypic Enhancement Phenotypic Suppression interaction prediction Co-expression	FSW = 0.1944	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT1G08780	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.1483	Unknown	AIP3 (ABI3-INTERACTING PROTEIN 3) UNFOLDED PROTEIN BINDING
AT1G23900	Predicted Affinity Capture-MS	FSW = 0.0206	Unknown	GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1) BINDING / CLATHRIN BINDING / PROTEIN BINDING / PROTEIN TRANSPORTER
AT1G29990	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.1568	Unknown	PDF6 (PREFOLDIN 6) UNFOLDED PROTEIN BINDING
AT1G52740	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1182	Unknown	HTA9 (HISTONE H2A PROTEIN 9) DNA BINDING
AT1G60430	Predicted Synthetic Lethality	FSW = 0.0074	Unknown	ARPC3 (ACTIN-RELATED PROTEIN C3) STRUCTURAL MOLECULE
AT1G67190	Predicted Synthetic Lethality	FSW = 0.0659	Unknown	F-BOX FAMILY PROTEIN
AT1G77670	Predicted Synthetic Lethality	FSW = 0.0084	Unknown	AMINOTRANSFERASE CLASS I AND II FAMILY PROTEIN
AT1G79890	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1356	Unknown	HELICASE-RELATED
AT2G16710	Predicted Synthetic Lethality	FSW = 0.0044	Unknown	HESB-LIKE DOMAIN-CONTAINING PROTEIN
AT2G19540	Predicted Affinity Capture-MS	FSW = 0.0038	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G37550	Predicted Synthetic Lethality	FSW = 0.0042	Unknown	AGD7 ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING
AT2G44580	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement interaction prediction	FSW = 0.2009	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT3G12670	Predicted Affinity Capture-MS	FSW = 0.0045	Unknown	EMB2742 (EMBRYO DEFECTIVE 2742) CTP SYNTHASE/ CATALYTIC
AT3G22480	Predicted interaction prediction Synthetic Lethality Synthetic Lethality synthetic growth defect Phenotypic Enhancement Co-expression	FSW = 0.1582	Unknown	PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT1G24290	Predicted two hybrid interaction prediction	FSW = 0.0295	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT1G77720	Predicted Synthetic Rescue	FSW = 0.0383	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT2G13680	Predicted Phenotypic Enhancement	FSW = 0.0080	Unknown	CALS5 (CALLOSE SYNTHASE 5) 13-BETA-GLUCAN SYNTHASE
AT3G02820	Predicted Phenotypic Suppression	FSW = 0.1286	Unknown	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN
AT3G25100	Predicted Synthetic Lethality Co-expression	FSW = 0.0748	Unknown	CDC45 (CELL DIVISION CYCLE 45)
AT3G42660	Predicted interaction prediction Synthetic Lethality Synthetic Lethality synthetic growth defect Phenotypic Enhancement Co-expression	FSW = 0.1719	Unknown	NUCLEOTIDE BINDING
AT3G49650	Predicted Synthetic Rescue Phenotypic Enhancement	FSW = 0.0662	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT4G11920	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.0709	Unknown	CCS52A2 SIGNAL TRANSDUCER
AT4G12620	Predicted Synthetic Rescue	FSW = 0.0155	Unknown	ORC1B (ORIGIN OF REPLICATION COMPLEX 1B) DNA BINDING / DOUBLE-STRANDED METHYLATED DNA BINDING / PROTEIN BINDING
AT4G16970	Predicted Synthetic Lethality	FSW = 0.0551	Unknown	ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G27180	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2137	Unknown	ATK2 (ARABIDOPSIS THALIANA KINESIN 2) MICROTUBULE BINDING / MICROTUBULE MOTOR
AT5G09740	Predicted synthetic growth defect	FSW = 0.0593	Unknown	HAM2 (HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2) H3/H4 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE/ NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G12210	Predicted biochemical Synthetic Lethality	FSW = 0.0258	Unknown	GERANYLGERANYL TRANSFERASE TYPE II BETA SUBUNIT PUTATIVE / RAB GERANYLGERANYLTRANSFERASE BETA SUBUNIT PUTATIVE
AT5G23290	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.1620	Unknown	PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G42190	Predicted Synthetic Lethality	FSW = 0.0163	Unknown	ASK2 (ARABIDOPSIS SKP1-LIKE 2) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G45600	Predicted Synthetic Lethality Phenotypic Enhancement Synthetic Lethality	FSW = 0.1172	Unknown	GAS41 PROTEIN BINDING
AT5G46280	Predicted Phenotypic Suppression Co-expression	FSW = 0.0224	Unknown	DNA REPLICATION LICENSING FACTOR PUTATIVE
AT5G49510	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.1323	Unknown	PDF3 (PREFOLDIN 3) UNFOLDED PROTEIN BINDING
AT5G67100	Predicted Phenotypic Suppression Synthetic Rescue Co-expression	FSW = 0.0371	Unknown	ICU2 (INCURVATA2) DNA-DIRECTED DNA POLYMERASE
AT3G50520	Predicted Affinity Capture-MS	FSW = 0.0149	Unknown	PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE FAMILY PROTEIN
AT3G54380	Predicted Phenotypic Enhancement	FSW = 0.0856	Unknown	SAC3/GANP FAMILY PROTEIN
AT5G15400	Predicted two hybrid	FSW = 0.0320	Unknown	U-BOX DOMAIN-CONTAINING PROTEIN
AT5G48180	Predicted two hybrid	FSW = 0.0155	Unknown	NSP5 (NITRILE SPECIFIER PROTEIN 5)
AT5G54200	Predicted Synthetic Lethality	FSW = 0.0120	Unknown	WD-40 REPEAT FAMILY PROTEIN
AT5G58690	Predicted Synthetic Lethality	FSW = 0.0131	Unknown	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
AT4G21530	Predicted Affinity Capture-MS	FSW = 0.0702	Unknown	NUCLEOTIDE BINDING
AT5G05560	Predicted Synthetic Rescue	FSW = 0.0541	Unknown	EMB2771 (EMBRYO DEFECTIVE 2771) UBIQUITIN-PROTEIN LIGASE
AT5G15540	Predicted Phenotypic Suppression	FSW = 0.0122	Unknown	EMB2773 (EMBRYO DEFECTIVE 2773) BINDING / PROTEIN BINDING / ZINC ION BINDING
AT5G17410	Predicted Phenotypic Enhancement Affinity Capture-Western two hybrid	FSW = 0.0506	Unknown	TUBULIN FAMILY PROTEIN
AT5G44740	Predicted Synthetic Rescue	FSW = 0.0114	Unknown	POLH (Y-FAMILT DNA POLYMERASE H) DNA-DIRECTED DNA POLYMERASE
AT3G60740	Predicted Synthetic Lethality	FSW = 0.0373	Unknown	TTN1 (TITAN 1) TUBULIN BINDING
AT4G33260	Predicted in vivo in vivo in vivo in vivo in vitro in vitro in vitro in vitro Affinity Capture-MS in vitro in vivo	FSW = 0.0526	Unknown	CDC202 SIGNAL TRANSDUCER
AT3G12070	Predicted biochemical Synthetic Lethality	FSW = 0.0610	Unknown	GERANYLGERANYL TRANSFERASE TYPE II BETA SUBUNIT PUTATIVE / RAB GERANYLGERANYLTRANSFERASE BETA SUBUNIT PUTATIVE
AT5G16270	Predicted Phenotypic Suppression	FSW = 0.1154	Unknown	SYN4 (SISTER CHROMATID COHESION 1 PROTEIN 4)
AT2G18000	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0853	Unknown	TAF14 (TBP-ASSOCIATED FACTOR 14)
AT2G40116	Predicted Synthetic Lethality	FSW = 0.0223	Unknown	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
AT1G11660	Predicted Synthetic Lethality	FSW = 0.0098	Unknown	HEAT SHOCK PROTEIN PUTATIVE
AT1G64610	Predicted Synthetic Lethality	FSW = 0.0245	Unknown	WD-40 REPEAT FAMILY PROTEIN
AT3G61150	Predicted two hybrid	FSW = 0.0044	Unknown	HDG1 (HOMEODOMAIN GLABROUS 1) DNA BINDING / TRANSCRIPTION FACTOR
AT5G54670	Predicted interaction prediction	FSW = 0.1231	Unknown	ATK3 (ARABIDOPSIS THALIANA KINESIN 3) ATPASE/ MICROTUBULE BINDING / MICROTUBULE MOTOR
AT5G46750	Predicted interaction prediction	FSW = 0.0050	Unknown	AGD9 (ARF-GAP DOMAIN 9) ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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AT3G25980 - ( mitotic spindle checkpoint protein putative (MAD2) )

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