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AT1G29990 - ( PDF6 (PREFOLDIN 6) unfolded protein binding )

155 Proteins interacs with AT1G29990

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT1G59940	Experimental two hybrid	FSW = 0.0068	Unknown	ARR3 (RESPONSE REGULATOR 3) TRANSCRIPTION REGULATOR/ TWO-COMPONENT RESPONSE REGULATOR
AT4G14960	Predicted interologs mapping Synthetic Lethality interaction prediction	FSW = 0.0597	Unknown	TUA6 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT4G29130	Predicted Synthetic Lethality interaction prediction	FSW = 0.0344	Unknown	HXK1 (HEXOKINASE 1) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT1G20010	Predicted Synthetic Lethality	FSW = 0.0805	Unknown	TUB5 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT1G78900	Predicted Phenotypic Enhancement	FSW = 0.0392	Unknown	VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A) ATP BINDING / HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT1G04820	Predicted interologs mapping Synthetic Lethality	FSW = 0.0536	Unknown	TUA4 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT3G12580	Predicted Synthetic Lethality interaction prediction	FSW = 0.0110	Unknown	HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING
AT1G07770	Predicted Synthetic Lethality interaction prediction	FSW = 0.0100	Unknown	RPS15A (RIBOSOMAL PROTEIN S15A) STRUCTURAL CONSTITUENT OF RIBOSOME
AT4G01320	Predicted Synthetic Lethality interaction prediction	FSW = 0.0297	Unknown	ATSTE24 ENDOPEPTIDASE/ METALLOENDOPEPTIDASE
AT3G60840	Predicted Phenotypic Enhancement Synthetic Lethality interaction prediction	FSW = 0.1630	Unknown	MAP65-4 (MICROTUBULE-ASSOCIATED PROTEIN 65-4)
AT5G19740	Predicted Phenotypic Enhancement	FSW = 0.1182	Unknown	PEPTIDASE M28 FAMILY PROTEIN
AT2G01690	Predicted Synthetic Lethality interaction prediction	FSW = 0.0541	Unknown	BINDING
AT3G22110	Predicted Phenotypic Suppression	FSW = 0.1004	Unknown	PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT1G50460	Predicted Synthetic Lethality	FSW = 0.0547	Unknown	HKL1 (HEXOKINASE-LIKE 1) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT4G39460	Predicted Synthetic Lethality interaction prediction	FSW = 0.0066	Unknown	SAMC1 (S-ADENOSYLMETHIONINE CARRIER 1) S-ADENOSYLMETHIONINE TRANSMEMBRANE TRANSPORTER/ BINDING
AT4G01370	Predicted Phenotypic Suppression	FSW = 0.0306	Unknown	ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4) MAP KINASE/ KINASE
AT3G02520	Predicted Phenotypic Enhancement	FSW = 0.0940	Unknown	GRF7 (GENERAL REGULATORY FACTOR 7) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G16030	Predicted Synthetic Lethality	FSW = 0.0055	Unknown	HSP70B (HEAT SHOCK PROTEIN 70B) ATP BINDING
AT5G59690	Predicted Phenotypic Suppression	FSW = 0.0927	Unknown	HISTONE H4
AT2G45300	Predicted Phenotypic Enhancement	FSW = 0.0591	Unknown	3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE / EPSP SYNTHASE
AT3G56570	Predicted Phenotypic Enhancement	FSW = 0.0139	Unknown	SET DOMAIN-CONTAINING PROTEIN
AT5G63110	Predicted Phenotypic Suppression	FSW = 0.1337	Unknown	HDA6 (HISTONE DEACETYLASE 6) HISTONE DEACETYLASE
AT5G58230	Predicted Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.0339	Unknown	MSI1 (MULTICOPY SUPRESSOR OF IRA1) PROTEIN BINDING
AT1G71440	Predicted interaction prediction Synthetic Lethality Phenotypic Enhancement	FSW = 0.2034	Unknown	PFI (PFIFFERLING)
AT4G38740	Predicted Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.0389	Unknown	ROC1 (ROTAMASE CYP 1) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT2G16600	Predicted Synthetic Lethality	FSW = 0.0217	Unknown	ROC3 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT5G06680	Predicted Synthetic Lethality interaction prediction	FSW = 0.0327	Unknown	SPC98 (SPINDLE POLE BODY COMPONENT 98) TUBULIN BINDING
AT5G12250	Predicted Synthetic Lethality interaction prediction	FSW = 0.0915	Unknown	TUB6 (BETA-6 TUBULIN) STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT3G61650	Predicted interaction prediction Synthetic Lethality interologs mapping Affinity Capture-Western	FSW = 0.1432	Unknown	TUBG1 (GAMMA-TUBULIN) GTP BINDING / GTPASE/ STRUCTURAL MOLECULE
AT3G12110	Predicted Phenotypic Enhancement	FSW = 0.0716	Unknown	ACT11 (ACTIN-11) STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT5G23630	Predicted Synthetic Lethality interaction prediction	FSW = 0.0699	Unknown	ATPASE E1-E2 TYPE FAMILY PROTEIN / HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILIY PROTEIN
AT1G32090	Predicted interaction prediction	FSW = 0.0127	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT1G11960	Predicted Synthetic Lethality	FSW = 0.0286	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN PLASMA MEMBRANE EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF221 (INTERPROIPR003864) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED (TAIRAT1G623201) HAS 746 BLAST HITS TO 706 PROTEINS IN 111 SPECIES ARCHAE - 0 BACTERIA - 4 METAZOA - 131 FUNGI - 370 PLANTS - 224 VIRUSES - 0 OTHER EUKARYOTES - 17 (SOURCE NCBI BLINK)
AT2G17440	Predicted Affinity Capture-MS	FSW = 0.0036	Unknown	LEUCINE-RICH REPEAT FAMILY PROTEIN
AT5G20890	Predicted Synthetic Lethality interaction prediction Co-expression	FSW = 0.0093	Unknown	CHAPERONIN PUTATIVE
AT1G08970	Predicted Synthetic Lethality	FSW = 0.0556	Unknown	NF-YC9 (NUCLEAR FACTOR Y SUBUNIT C9) DNA BINDING / TRANSCRIPTION FACTOR
AT2G44680	Predicted Phenotypic Suppression	FSW = 0.0827	Unknown	CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE
AT1G56170	Predicted Synthetic Lethality interaction prediction	FSW = 0.0578	Unknown	NF-YC2 (NUCLEAR FACTOR Y SUBUNIT C2) DNA BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR
AT4G05190	Predicted Synthetic Lethality Co-expression	FSW = 0.1918	Unknown	ATK5 (ARABIDOPSIS THALIANA KINESIN 5) MICROTUBULE MOTOR
AT5G67270	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.3171	Unknown	ATEB1C (MICROTUBULE END BINDING PROTEIN 1) MICROTUBULE BINDING
AT4G02070	Predicted Phenotypic Suppression	FSW = 0.0141	Unknown	MSH6 (MUTS HOMOLOG 6) DAMAGED DNA BINDING
AT1G17590	Predicted Synthetic Lethality	FSW = 0.0160	Unknown	NF-YA8 (NUCLEAR FACTOR Y SUBUNIT A8) TRANSCRIPTION FACTOR
AT2G38810	Predicted interaction prediction	FSW = 0.1000	Unknown	HTA8 (HISTONE H2A 8) DNA BINDING
AT3G12810	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.1975	Unknown	PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT1G19120	Predicted Phenotypic Suppression	FSW = 0.1136	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT2G03870	Predicted Phenotypic Suppression	FSW = 0.1299	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT4G14540	Predicted interaction prediction	FSW = 0.0346	Unknown	NF-YB3 (NUCLEAR FACTOR Y SUBUNIT B3) TRANSCRIPTION FACTOR
AT1G02740	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1280	Unknown	CHROMATIN BINDING
AT1G05120	Predicted Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.0430	Unknown	SNF2 DOMAIN-CONTAINING PROTEIN / HELICASE DOMAIN-CONTAINING PROTEIN / RING FINGER DOMAIN-CONTAINING PROTEIN
AT1G07370	Predicted Phenotypic Enhancement	FSW = 0.1370	Unknown	PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN) DNA BINDING / DNA POLYMERASE PROCESSIVITY FACTOR/ PROTEIN BINDING
AT3G20010	Predicted Phenotypic Enhancement	FSW = 0.0479	Unknown	SNF2 DOMAIN-CONTAINING PROTEIN / HELICASE DOMAIN-CONTAINING PROTEIN / RING FINGER DOMAIN-CONTAINING PROTEIN
AT2G13370	Predicted Phenotypic Suppression	FSW = 0.1280	Unknown	CHR5 (CHROMATIN REMODELING 5) ATP BINDING / DNA BINDING / CHROMATIN BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G24500	Predicted Phenotypic Suppression	FSW = 0.0659	Unknown	FZF TRANSCRIPTION FACTOR
AT2G34720	Predicted Synthetic Lethality interaction prediction	FSW = 0.0173	Unknown	NF-YA4 (NUCLEAR FACTOR Y SUBUNIT A4) SPECIFIC TRANSCRIPTIONAL REPRESSOR/ TRANSCRIPTION FACTOR
AT2G36740	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2058	Unknown	SWC2 DNA BINDING / TRANSCRIPTION FACTOR
AT2G38560	Predicted Phenotypic Enhancement	FSW = 0.0916	Unknown	TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION ELONGATION FACTOR/ TRANSCRIPTION FACTOR
AT5G47640	Predicted Synthetic Lethality	FSW = 0.0340	Unknown	NF-YB2 (NUCLEAR FACTOR Y SUBUNIT B2) TRANSCRIPTION FACTOR
AT2G13570	Predicted Synthetic Lethality	FSW = 0.0350	Unknown	NF-YB7 (NUCLEAR FACTOR Y SUBUNIT B7) TRANSCRIPTION FACTOR
AT2G06210	Predicted Phenotypic Suppression	FSW = 0.0786	Unknown	ELF8 (EARLY FLOWERING 8) BINDING
AT1G72330	Predicted Synthetic Lethality	FSW = 0.0325	Unknown	ALAAT2 (ALANINE AMINOTRANSFERASE 2) ATP BINDING / L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE
AT3G17910	Predicted Synthetic Lethality interaction prediction Co-expression	FSW = 0.0206	Unknown	SURF1 (SURFEIT 1)
AT5G51220	Predicted Synthetic Lethality interaction prediction	FSW = 0.0066	Unknown	UBIQUINOL-CYTOCHROME C CHAPERONE FAMILY PROTEIN
AT3G14270	Predicted interaction prediction	FSW = 0.0334	Unknown	PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN
AT1G14690	Predicted Synthetic Lethality	FSW = 0.1422	Unknown	MAP65-7 (MICROTUBULE-ASSOCIATED PROTEIN 65-7)
AT3G47690	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.2250	Unknown	ATEB1A MICROTUBULE BINDING
AT1G57550	Predicted Synthetic Lethality	FSW = 0.0457	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT3G25980	Predicted interaction prediction Synthetic Lethality Synthetic Lethality Phenotypic Enhancement Co-expression	FSW = 0.1568	Unknown	MITOTIC SPINDLE CHECKPOINT PROTEIN PUTATIVE (MAD2)
AT2G31300	Predicted Synthetic Lethality interaction prediction	FSW = 0.0930	Unknown	ARPC1B (ACTIN-RELATED PROTEIN C1B) ACTIN BINDING / NUCLEOTIDE BINDING
AT2G30910	Predicted Synthetic Lethality	FSW = 0.0651	Unknown	ARPC1A (ACTIN-RELATED PROTEIN C1A) ACTIN BINDING / NUCLEOTIDE BINDING
AT5G19910	Predicted Phenotypic Suppression	FSW = 0.1624	Unknown	SOH1 FAMILY PROTEIN
AT2G36200	Predicted interaction prediction Synthetic Lethality Synthetic Lethality	FSW = 0.2305	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT5G23290	Predicted interaction prediction two hybrid two hybrid Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS two hybrid Co-purification Phenotypic Suppression interologs mapping Enriched domain pair Co-expression	FSW = 0.5557	Unknown	PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G07590	Predicted Affinity Capture-MS	FSW = 0.0073	Unknown	WD-40 REPEAT PROTEIN FAMILY
AT1G04730	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement interaction prediction	FSW = 0.2038	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT1G05910	Predicted Synthetic Lethality interaction prediction	FSW = 0.1222	Unknown	CELL DIVISION CYCLE PROTEIN 48-RELATED / CDC48-RELATED
AT1G08780	Predicted Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Phenotypic Suppression interologs mapping interaction prediction	FSW = 0.6627	Unknown	AIP3 (ABI3-INTERACTING PROTEIN 3) UNFOLDED PROTEIN BINDING
AT1G09150	Predicted Phenotypic Enhancement	FSW = 0.0063	Unknown	PSEUDOURIDINE SYNTHASE AND ARCHAEOSINE TRANSGLYCOSYLASE (PUA) DOMAIN-CONTAINING PROTEIN
AT1G20610	Predicted Synthetic Lethality interaction prediction	FSW = 0.0483	Unknown	CYCB23 (CYCLIN B23) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G23260	Predicted Synthetic Lethality interaction prediction	FSW = 0.0591	Unknown	MMZ1 (MMS ZWEI HOMOLOGUE 1) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT1G29150	Predicted Phenotypic Suppression	FSW = 0.1151	Unknown	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)
AT1G52740	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.2049	Unknown	HTA9 (HISTONE H2A PROTEIN 9) DNA BINDING
AT1G60620	Predicted Phenotypic Suppression	FSW = 0.0613	Unknown	ATRPAC43 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ PROTEIN DIMERIZATION
AT1G79890	Predicted interaction prediction Synthetic Lethality Phenotypic Enhancement	FSW = 0.1726	Unknown	HELICASE-RELATED
AT1G80410	Predicted synthetic growth defect	FSW = 0.0794	Unknown	EMB2753 (EMBRYO DEFECTIVE 2753) BINDING
AT2G30410	Predicted interaction prediction Synthetic Lethality Synthetic Lethality interologs mapping Phenotypic Enhancement	FSW = 0.1385	Unknown	KIS (KIESEL) UNFOLDED PROTEIN BINDING
AT2G44580	Predicted Synthetic Lethality synthetic growth defect interaction prediction	FSW = 0.1962	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT3G02820	Predicted Synthetic Lethality interaction prediction Co-expression	FSW = 0.1786	Unknown	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN
AT3G22142	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.1754	Unknown	STRUCTURAL CONSTITUENT OF CELL WALL
AT3G22320	Predicted Affinity Capture-MS	FSW = 0.0091	Unknown	NRPB5 DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT3G22480	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Phenotypic Suppression interologs mapping interaction prediction Co-expression	FSW = 0.5813	Unknown	PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT3G26020	Predicted Phenotypic Enhancement	FSW = 0.1532	Unknown	SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B PUTATIVE
AT3G27000	Predicted Synthetic Lethality interaction prediction	FSW = 0.0539	Unknown	ARP2 (ACTIN RELATED PROTEIN 2) PROTEIN BINDING / STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT3G42660	Predicted Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.2645	Unknown	NUCLEOTIDE BINDING
AT3G45630	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.0125	Unknown	RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT3G46960	Predicted Phenotypic Suppression	FSW = 0.0267	Unknown	ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING
AT4G15930	Predicted interaction prediction Synthetic Lethality	FSW = 0.0408	Unknown	MICROTUBULE MOTOR
AT4G27180	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2318	Unknown	ATK2 (ARABIDOPSIS THALIANA KINESIN 2) MICROTUBULE BINDING / MICROTUBULE MOTOR
AT4G39050	Predicted Synthetic Lethality	FSW = 0.0966	Unknown	KINESIN-RELATED PROTEIN (MKRP2)
AT5G09230	Predicted Phenotypic Suppression	FSW = 0.0560	Unknown	SRT2 (SIRTUIN 2) DNA BINDING / NAD OR NADH BINDING / NAD-DEPENDENT HISTONE DEACETYLASE/ ZINC ION BINDING
AT5G09740	Predicted Synthetic Lethality	FSW = 0.1339	Unknown	HAM2 (HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2) H3/H4 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE/ NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G10790	Predicted Phenotypic Suppression	FSW = 0.1263	Unknown	UBP22 (UBIQUITIN-SPECIFIC PROTEASE 22) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE/ ZINC ION BINDING
AT5G13780	Predicted synthetic growth defect Phenotypic Suppression Co-expression	FSW = 0.1391	Unknown	GCN5-RELATED N-ACETYLTRANSFERASE PUTATIVE
AT5G43500	Predicted Phenotypic Suppression	FSW = 0.1033	Unknown	ATARP9 (ACTIN-RELATED PROTEIN 9) DNA BINDING / PROTEIN BINDING
AT5G45600	Predicted Phenotypic Enhancement	FSW = 0.2826	Unknown	GAS41 PROTEIN BINDING
AT5G49510	Predicted Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS Phenotypic Suppression interologs mapping interaction prediction Enriched domain pair Co-expression	FSW = 0.6094	Unknown	PDF3 (PREFOLDIN 3) UNFOLDED PROTEIN BINDING
AT5G50320	Predicted Phenotypic Enhancement	FSW = 0.0605	Unknown	ELO3 (ELONGATA 3) HISTONE ACETYLTRANSFERASE
AT5G61150	Predicted Phenotypic Suppression	FSW = 0.0866	Unknown	VIP4 (VERNALIZATION INDEPENDENCE 4) PROTEIN BINDING
AT5G63610	Predicted Phenotypic Enhancement	FSW = 0.0662	Unknown	CDKE1 (CYCLIN-DEPENDENT KINASE E1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G34150	Predicted Phenotypic Suppression	FSW = 0.1213	Unknown	TRNA PSEUDOURIDINE SYNTHASE FAMILY PROTEIN
AT1G49540	Predicted Phenotypic Enhancement	FSW = 0.1231	Unknown	NUCLEOTIDE BINDING
AT1G51310	Predicted Synthetic Lethality	FSW = 0.0729	Unknown	TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE
AT1G55915	Predicted Synthetic Lethality interaction prediction	FSW = 0.0557	Unknown	ZINC ION BINDING
AT1G71790	Predicted Synthetic Lethality interaction prediction	FSW = 0.0223	Unknown	F-ACTIN CAPPING PROTEIN BETA SUBUNIT FAMILY PROTEIN
AT2G11000	Predicted Synthetic Lethality interaction prediction	FSW = 0.0468	Unknown	ATMAK10 ACETYLTRANSFERASE
AT2G22400	Predicted Synthetic Lethality interaction prediction	FSW = 0.0401	Unknown	NOL1/NOP2/SUN FAMILY PROTEIN
AT2G27970	Predicted Phenotypic Enhancement	FSW = 0.0385	Unknown	CKS2 (CDK-SUBUNIT 2) CYCLIN-DEPENDENT PROTEIN KINASE/ CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G32850	Predicted Synthetic Lethality interaction prediction	FSW = 0.0240	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT2G33560	Predicted Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.0906	Unknown	SPINDLE CHECKPOINT PROTEIN-RELATED
AT2G45695	Predicted Synthetic Lethality	FSW = 0.0342	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN CONTAINS INTERPRO DOMAIN/S UBIQUITIN RELATED MODIFIER 1 (INTERPROIPR015221) UBIQUITIN-RELATED MODIFIER 1 (INTERPROIPR017188) MOLYBDOPTERIN SYNTHASE/THIAMIN BIOSYNTHESIS SULPHUR CARRIER BETA-GRASP (INTERPROIPR016155) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT3G611131) HAS 238 BLAST HITS TO 238 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 93 FUNGI - 72 PLANTS - 18 VIRUSES - 0 OTHER EUKARYOTES - 55 (SOURCE NCBI BLINK)
AT3G04710	Predicted Phenotypic Suppression	FSW = 0.0536	Unknown	ANKYRIN REPEAT FAMILY PROTEIN
AT3G10070	Predicted Phenotypic Suppression	FSW = 0.0989	Unknown	TAF12 (TBP-ASSOCIATED FACTOR 12) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT3G13330	Predicted Phenotypic Enhancement	FSW = 0.0083	Unknown	BINDING
AT3G20475	Predicted Phenotypic Suppression	FSW = 0.0236	Unknown	MSH5 (MUTS-HOMOLOGUE 5) ATP BINDING / DAMAGED DNA BINDING / MISMATCHED DNA BINDING
AT3G20800	Predicted Synthetic Lethality interaction prediction	FSW = 0.0741	Unknown	RCD1-LIKE CELL DIFFERENTIATION PROTEIN PUTATIVE
AT3G21070	Predicted Synthetic Lethality	FSW = 0.0143	Unknown	NADK1 (NAD KINASE 1) NAD+ KINASE/ NADH KINASE/ CALMODULIN BINDING
AT3G26500	Predicted Affinity Capture-MS	FSW = 0.0103	Unknown	LEUCINE-RICH REPEAT FAMILY PROTEIN
AT3G47810	Predicted Synthetic Lethality interaction prediction	FSW = 0.0401	Unknown	MAG1 (MAIGO 1) HYDROLASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT3G50960	Predicted Synthetic Lethality interaction prediction	FSW = 0.0538	Unknown	PLP3A (PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG) BETA-TUBULIN BINDING
AT3G54380	Predicted Phenotypic Suppression	FSW = 0.1989	Unknown	SAC3/GANP FAMILY PROTEIN
AT4G04210	Predicted Phenotypic Enhancement	FSW = 0.1157	Unknown	PUX4 PROTEIN BINDING
AT4G08500	Predicted Synthetic Lethality	FSW = 0.0321	Unknown	MEKK1 (MAP KINASE KINASE KINASE 1) DNA BINDING / MAP KINASE KINASE KINASE/ KINASE/ KINASE BINDING / PROTEIN BINDING
AT4G24710	Predicted Synthetic Lethality interaction prediction	FSW = 0.0030	Unknown	ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT4G33240	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1641	Unknown	1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE/ ATP BINDING / PHOSPHATIDYLINOSITOL PHOSPHATE KINASE/ PROTEIN BINDING / ZINC ION BINDING
AT4G38630	Predicted Phenotypic Suppression	FSW = 0.1027	Unknown	RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR
AT5G02310	Predicted Phenotypic Suppression	FSW = 0.0709	Unknown	PRT6 (PROTEOLYSIS 6) UBIQUITIN-PROTEIN LIGASE
AT5G06620	Predicted Synthetic Lethality	FSW = 0.0174	Unknown	SDG38 (SET DOMAIN PROTEIN 38)
AT5G17410	Predicted Synthetic Lethality	FSW = 0.0346	Unknown	TUBULIN FAMILY PROTEIN
AT5G26360	Predicted Synthetic Lethality interaction prediction Co-expression	FSW = 0.0185	Unknown	CHAPERONIN PUTATIVE
AT5G41700	Predicted Phenotypic Enhancement	FSW = 0.0800	Unknown	UBC8 (UBIQUITIN CONJUGATING ENZYME 8) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G48120	Predicted Phenotypic Suppression	FSW = 0.2016	Unknown	BINDING
AT5G55130	Predicted Synthetic Lethality interaction prediction Co-expression	FSW = 0.0436	Unknown	CNX5 (CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 5) MO-MOLYBDOPTERIN COFACTOR SULFURASE
AT5G63920	Predicted Synthetic Lethality interaction prediction	FSW = 0.0597	Unknown	DNA TOPOISOMERASE III ALPHA PUTATIVE
AT5G65180	Predicted Synthetic Lethality interaction prediction	FSW = 0.1164	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF618 (INTERPROIPR006903) REGULATION OF NUCLEAR PRE-MRNA PROTEIN (INTERPROIPR006569) ENTH/VHS (INTERPROIPR008942) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G100601) HAS 3523 BLAST HITS TO 3241 PROTEINS IN 333 SPECIES ARCHAE - 25 BACTERIA - 251 METAZOA - 1575 FUNGI - 421 PLANTS - 142 VIRUSES - 17 OTHER EUKARYOTES - 1092 (SOURCE NCBI BLINK)
AT5G66100	Predicted Phenotypic Enhancement	FSW = 0.1107	Unknown	LA DOMAIN-CONTAINING PROTEIN
AT5G67320	Predicted Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.1362	Unknown	HOS15 (HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 15)
AT1G16330	Predicted Synthetic Lethality	FSW = 0.0388	Unknown	CYCB31 (CYCLIN B31) CYCLIN-DEPENDENT PROTEIN KINASE
AT2G18990	Predicted Synthetic Lethality	FSW = 0.0472	Unknown	TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG)
AT3G26990	Predicted Synthetic Lethality	FSW = 0.0370	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF618 (INTERPROIPR006903) REGULATION OF NUCLEAR PRE-MRNA PROTEIN (INTERPROIPR006569) ENTH/VHS (INTERPROIPR008942) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G100601) HAS 815 BLAST HITS TO 806 PROTEINS IN 138 SPECIES ARCHAE - 0 BACTERIA - 10 METAZOA - 490 FUNGI - 159 PLANTS - 81 VIRUSES - 1 OTHER EUKARYOTES - 74 (SOURCE NCBI BLINK)
AT1G71010	Predicted Synthetic Lethality	FSW = 0.0878	Unknown	PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN
AT1G48510	Predicted Synthetic Lethality	FSW = 0.0137	Unknown	CYTOCHROME C OXIDASE ASSEMBLY PROTEIN SURFEIT-RELATED
AT1G09000	Predicted Synthetic Lethality	FSW = 0.0488	Unknown	ANP1 (ARABIDOPSIS NPK1-RELATED PROTEIN KINASE 1) MAP KINASE KINASE KINASE/ KINASE
AT5G54670	Predicted interaction prediction	FSW = 0.1623	Unknown	ATK3 (ARABIDOPSIS THALIANA KINESIN 3) ATPASE/ MICROTUBULE BINDING / MICROTUBULE MOTOR
AT2G38905	Predicted interaction prediction	FSW = 0.0600	Unknown	HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT1G54960	Predicted interaction prediction	FSW = 0.0468	Unknown	ANP2 MAP KINASE KINASE KINASE/ KINASE
AT4G37280	Predicted interaction prediction	FSW = 0.0445	Unknown	MRG FAMILY PROTEIN

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT1G29990 - ( PDF6 (PREFOLDIN 6) unfolded protein binding )

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