Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G20696 - ( HMGB3 (HIGH MOBILITY GROUP B 3) DNA binding / chromatin binding / structural constituent of chromatin / transcription factor )

104 Proteins interacs with AT1G20696
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT4G01100

Predicted

Affinity Capture-MS

FSW = 0.0085

Unknown

ADNT1 (ADENINE NUCLEOTIDE TRANSPORTER 1) ADP TRANSMEMBRANE TRANSPORTER/ AMP TRANSMEMBRANE TRANSPORTER/ ATP TRANSMEMBRANE TRANSPORTER/ BINDING
AT4G32470

Predicted

Affinity Capture-MS

FSW = 0.5326

Unknown

UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT2G01250

Predicted

Affinity Capture-MS

FSW = 0.1401

Unknown

60S RIBOSOMAL PROTEIN L7 (RPL7B)
AT5G09590

Predicted

Synthetic Lethality

FSW = 0.0390

Unknown

MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING
AT2G20450

Predicted

Affinity Capture-MS

FSW = 0.4610

Unknown

60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT3G56190

Predicted

Affinity Capture-MS

FSW = 0.4032

Unknown

ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN
AT1G22780

Predicted

Affinity Capture-MS

FSW = 0.5535

Unknown

PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G28715

Predicted

Affinity Capture-MS

Co-purification

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0824

Unknown

H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT1G07930Predicted

Affinity Capture-MS

FSW = 0.5487

Unknown

ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT3G62870

Predicted

two hybrid

Synthetic Lethality

synthetic growth defect

FSW = 0.0543

Unknown

60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT2G29990

Predicted

Affinity Capture-MS

FSW = 0.1590

Unknown

NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2) FAD BINDING / NADH DEHYDROGENASE/ OXIDOREDUCTASE
AT3G08950

Predicted

Affinity Capture-MS

FSW = 0.4956

Unknown

ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT2G19860

Predicted

Affinity Capture-MS

FSW = 0.4873

Unknown

HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT4G29210

Predicted

Affinity Capture-Western

Co-purification

Affinity Capture-MS

FSW = 0.1026

Unknown

GGT4 (GAMMA-GLUTAMYL TRANSPEPTIDASE 4) GAMMA-GLUTAMYLTRANSFERASE/ GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE
AT3G19980

Predicted

Affinity Capture-MS

FSW = 0.4170

Unknown

ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT1G15210

Predicted

Affinity Capture-MS

FSW = 0.6175

Unknown

PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT1G65240

Predicted

Affinity Capture-MS

FSW = 0.1145

Unknown

ASPARTYL PROTEASE FAMILY PROTEIN
AT5G24400

Predicted

Affinity Capture-MS

FSW = 0.1354

Unknown

EMB2024 (EMBRYO DEFECTIVE 2024) 6-PHOSPHOGLUCONOLACTONASE/ CATALYTIC
AT3G20550

Predicted

synthetic growth defect

FSW = 0.0637

Unknown

DDL (DAWDLE)
AT3G16950

Predicted

Affinity Capture-MS

FSW = 0.4589

Unknown

LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT1G26880

Predicted

Phenotypic Enhancement

FSW = 0.0098

Unknown

60S RIBOSOMAL PROTEIN L34 (RPL34A)
AT5G65430

Predicted

Affinity Capture-MS

FSW = 0.0658

Unknown

GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT2G31910

Predicted

two hybrid

two hybrid

Affinity Capture-Western

Co-purification

FSW = 0.0152

Unknown

ATCHX21 (CATION/H+ EXCHANGER 21) SODIUMHYDROGEN ANTIPORTER
AT3G11630

Predicted

Affinity Capture-MS

FSW = 0.2747

Unknown

2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT3G06040

Predicted

Affinity Capture-MS

FSW = 0.5683

Unknown

RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT5G60390

Predicted

Affinity Capture-MS

FSW = 0.4219

Unknown

ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G45420

Predicted

Affinity Capture-MS

FSW = 0.4076

Unknown

MYB FAMILY TRANSCRIPTION FACTOR
AT5G23740

Predicted

Affinity Capture-MS

FSW = 0.5103

Unknown

RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA) STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G27970

Predicted

Affinity Capture-MS

FSW = 0.4589

Unknown

NTF2B (NUCLEAR TRANSPORT FACTOR 2B) RAN GTPASE BINDING / PROTEIN TRANSPORTER
AT1G55690

Predicted

Affinity Capture-Western

Affinity Capture-Western

Reconstituted Complex

Co-purification

FSW = 0.1119

Unknown

SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT3G19960

Predicted

Affinity Capture-MS

FSW = 0.0618

Unknown

ATM1 (ARABIDOPSIS THALIANA MYOSIN 1) MOTOR
AT3G05890

Predicted

interologs mapping

FSW = 0.0095

Unknown

RCI2B (RARE-COLD-INDUCIBLE 2B)
AT5G62300

Predicted

Affinity Capture-MS

FSW = 0.3333

Unknown

40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT5G43370

Predicted

Affinity Capture-MS

FSW = 0.5571

Unknown

APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT4G24400

Predicted

Affinity Capture-MS

FSW = 0.2351

Unknown

CIPK8 (CBL-INTERACTING PROTEIN KINASE 8) KINASE/ PROTEIN KINASE
AT4G36860

Predicted

Affinity Capture-MS

FSW = 0.5814

Unknown

ZINC ION BINDING
AT3G53870

Predicted

biochemical

FSW = 0.0066

Unknown

40S RIBOSOMAL PROTEIN S3 (RPS3B)
AT3G46900

Predicted

Affinity Capture-MS

FSW = 0.0044

Unknown

COPT2 COPPER ION TRANSMEMBRANE TRANSPORTER/ HIGH AFFINITY COPPER ION TRANSMEMBRANE TRANSPORTER
AT1G09640

Predicted

Affinity Capture-MS

FSW = 0.4611

Unknown

ELONGATION FACTOR 1B-GAMMA PUTATIVE / EEF-1B GAMMA PUTATIVE
AT2G35690

Predicted

Affinity Capture-MS

FSW = 0.4977

Unknown

ACX5 (ACYL-COA OXIDASE 5) FAD BINDING / ACYL-COA DEHYDROGENASE/ ACYL-COA OXIDASE/ ELECTRON CARRIER/ OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-CH GROUP OF DONORS
AT1G70580

Predicted

Affinity Capture-MS

FSW = 0.0395

Unknown

AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2) L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE/ GLYCINE2-OXOGLUTARATE AMINOTRANSFERASE
AT2G47640

Predicted

Affinity Capture-MS

FSW = 0.0717

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN D2 PUTATIVE / SNRNP CORE PROTEIN D2 PUTATIVE / SM PROTEIN D2 PUTATIVE
AT3G13445

Predicted

Affinity Capture-MS

FSW = 0.1800

Unknown

TBP1 (TATA BINDING PROTEIN 1) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ BINDING
AT3G21540

Predicted

Co-purification

FSW = 0.0406

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT5G59870

Predicted

Affinity Capture-MS

FSW = 0.5689

Unknown

HTA6 DNA BINDING
AT5G44500

Predicted

Affinity Capture-MS

FSW = 0.4281

Unknown

SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B PUTATIVE / SNRNP-B PUTATIVE / SM PROTEIN B PUTATIVE
AT2G37470

Predicted

Affinity Capture-MS

FSW = 0.3782

Unknown

HISTONE H2B PUTATIVE
AT1G29330

Predicted

Synthetic Lethality

FSW = 0.0075

Unknown

ERD2 (ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2) KDEL SEQUENCE BINDING / RECEPTOR
AT1G72480

Predicted

Affinity Capture-MS

FSW = 0.4390

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN GOLGI APPARATUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G010701) HAS 422 BLAST HITS TO 420 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 208 FUNGI - 101 PLANTS - 83 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK)
AT2G13650

Predicted

Affinity Capture-MS

FSW = 0.4943

Unknown

GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT3G16050

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.2667

Unknown

A37 PROTEIN HETERODIMERIZATION
AT1G80830

Predicted

interologs mapping

FSW = 0.0083

Unknown

NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1) INORGANIC ANION TRANSMEMBRANE TRANSPORTER/ MANGANESE ION TRANSMEMBRANE TRANSPORTER/ METAL ION TRANSMEMBRANE TRANSPORTER
AT3G52580

Predicted

Affinity Capture-MS

FSW = 0.5209

Unknown

40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT2G24040

Predicted

Affinity Capture-MS

FSW = 0.6108

Unknown

HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT3G12530

Predicted

Affinity Capture-MS

FSW = 0.4290

Unknown

PSF2
AT3G10610

Predicted

Affinity Capture-MS

FSW = 0.0152

Unknown

40S RIBOSOMAL PROTEIN S17 (RPS17C)
AT5G47880

Predicted

Affinity Capture-MS

FSW = 0.5259

Unknown

ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT1G05650

Predicted

Affinity Capture-MS

FSW = 0.3621

Unknown

POLYGALACTURONASE PUTATIVE / PECTINASE PUTATIVE
AT1G11530

Predicted

Affinity Capture-MS

FSW = 0.4765

Unknown

ATCXXS1 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1) PROTEIN DISULFIDE ISOMERASE
AT1G21370

Predicted

two hybrid

FSW = 0.0098

Unknown

UNKNOWN PROTEIN
AT1G63660

Predicted

Affinity Capture-MS

FSW = 0.1247

Unknown

GMP SYNTHASE (GLUTAMINE-HYDROLYZING) PUTATIVE / GLUTAMINE AMIDOTRANSFERASE PUTATIVE
AT1G76720

Predicted

Affinity Capture-MS

FSW = 0.5919

Unknown

GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT2G14880

Predicted

Affinity Capture-MS

FSW = 0.0072

Unknown

SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN
AT2G41530

Predicted

Affinity Capture-MS

FSW = 0.2339

Unknown

SFGH (S-FORMYLGLUTATHIONE HYDROLASE) S-FORMYLGLUTATHIONE HYDROLASE/ HYDROLASE ACTING ON ESTER BONDS
AT3G03080

Predicted

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

two hybrid

Affinity Capture-MS

Co-purification

FSW = 0.1047

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT3G09800

Predicted

Synthetic Lethality

FSW = 0.0202

Unknown

PROTEIN BINDING
AT3G13330Predicted

Affinity Capture-Western

Affinity Capture-Western

Reconstituted Complex

two hybrid

FSW = 0.0759

Unknown

BINDING
AT3G18660

Predicted

Affinity Capture-MS

FSW = 0.0512

Unknown

PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G52390

Predicted

Affinity Capture-MS

FSW = 0.4397

Unknown

TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT3G59410

Predicted

Affinity Capture-MS

FSW = 0.1587

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT4G23895

Predicted

two hybrid

FSW = 0.0729

Unknown

PLECKSTRIN HOMOLOGY (PH) DOMAIN-CONTAINING PROTEIN-RELATED
AT5G07950

Predicted

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

Co-purification

FSW = 0.1641

Unknown

UNKNOWN PROTEIN
AT5G09390

Predicted

Affinity Capture-MS

FSW = 0.4068

Unknown

CD2-BINDING PROTEIN-RELATED
AT5G43340

Predicted

Affinity Capture-Western

Co-purification

FSW = 0.1070

Unknown

PHT6 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G49930

Predicted

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Co-purification

FSW = 0.1098

Unknown

EMB1441 (EMBRYO DEFECTIVE 1441) NUCLEIC ACID BINDING / ZINC ION BINDING
AT5G52820

Predicted

Affinity Capture-MS

FSW = 0.0143

Unknown

WD-40 REPEAT FAMILY PROTEIN / NOTCHLESS PROTEIN PUTATIVE
AT1G24706

Predicted

Affinity Capture-MS

FSW = 0.2223

Unknown

UNKNOWN PROTEIN
AT1G33110

Predicted

Affinity Capture-MS

FSW = 0.5347

Unknown

MATE EFFLUX FAMILY PROTEIN
AT1G34580

Predicted

Affinity Capture-MS

FSW = 0.1560

Unknown

MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G51770

Predicted

Affinity Capture-MS

FSW = 0.5614

Unknown

UNKNOWN PROTEIN
AT1G59730

Predicted

Affinity Capture-MS

FSW = 0.2107

Unknown

ATH7 (THIOREDOXIN H-TYPE 7)
AT1G60730

Predicted

interologs mapping

FSW = 0.0213

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G62880

Predicted

Affinity Capture-MS

FSW = 0.5524

Unknown

CORNICHON FAMILY PROTEIN
AT1G64480

Predicted

Affinity Capture-MS

FSW = 0.4795

Unknown

CBL8 (CALCINEURIN B-LIKE PROTEIN 8) CALCIUM ION BINDING
AT1G71280

Predicted

Affinity Capture-MS

FSW = 0.4994

Unknown

DEAD/DEAH BOX HELICASE PUTATIVE
AT2G29390

Predicted

Affinity Capture-MS

FSW = 0.4560

Unknown

SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE
AT2G46860

Predicted

Affinity Capture-MS

FSW = 0.5613

Unknown

ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT3G12690

Predicted

Affinity Capture-MS

FSW = 0.5667

Unknown

AGC15 (AGC KINASE 15) KINASE
AT3G19940

Predicted

Affinity Capture-MS

FSW = 0.3959

Unknown

SUGAR TRANSPORTER PUTATIVE
AT3G20650

Predicted

Affinity Capture-MS

FSW = 0.3947

Unknown

MRNA CAPPING ENZYME FAMILY PROTEIN
AT3G30842

Predicted

Affinity Capture-MS

FSW = 0.4175

Unknown

PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G45630

Predicted

Co-purification

FSW = 0.0464

Unknown

RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN
AT3G46320Predicted

Affinity Capture-MS

FSW = 0.0146

Unknown

HISTONE H4
AT3G62770

Predicted

Affinity Capture-MS

FSW = 0.3687

Unknown

ATATG18A
AT4G17770

Predicted

Affinity Capture-MS

FSW = 0.6064

Unknown

ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT4G25860

Predicted

Affinity Capture-MS

FSW = 0.5070

Unknown

ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING
AT4G26230

Predicted

Affinity Capture-MS

FSW = 0.2844

Unknown

60S RIBOSOMAL PROTEIN L31 (RPL31B)
AT4G29140

Predicted

Affinity Capture-MS

FSW = 0.0178

Unknown

MATE EFFLUX PROTEIN-RELATED
AT4G39330

Predicted

Affinity Capture-MS

FSW = 0.4384

Unknown

CAD9 (CINNAMYL ALCOHOL DEHYDROGENASE 9) BINDING / CATALYTIC/ OXIDOREDUCTASE/ ZINC ION BINDING
AT5G19150

Predicted

Affinity Capture-MS

FSW = 0.1678

Unknown

CARBOHYDRATE KINASE FAMILY
AT5G19660

Predicted

Affinity Capture-MS

FSW = 0.5948

Unknown

S1P (SITE-1 PROTEASE) ENDOPEPTIDASE/ SERINE-TYPE ENDOPEPTIDASE
AT5G19820

Predicted

Affinity Capture-MS

FSW = 0.3655

Unknown

EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G41190

Predicted

Affinity Capture-MS

FSW = 0.4148

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT5G60940

Predicted

two hybrid

FSW = 0.0133

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454