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AT1G07670 - ( calcium-transporting ATPase )

95 Proteins interacs with AT1G07670

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT5G66680	Predicted Phenotypic Enhancement	FSW = 0.1587	Class C: plasma membrane endoplasmic reticulum	DGL1 DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE-PROTEIN GLYCOTRANSFERASE
AT1G02130	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0584	Class C: plasma membrane endoplasmic reticulum	ARA-5 (ARABIDOPSIS RAS 5) GTP BINDING
AT5G11560	Predicted Phenotypic Enhancement	FSW = 0.0102	Class C: plasma membrane endoplasmic reticulum	CATALYTIC
AT5G23630	Predicted Phenotypic Enhancement Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1773	Class C: plasma membrane endoplasmic reticulum	ATPASE E1-E2 TYPE FAMILY PROTEIN / HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILIY PROTEIN
AT1G11890	Predicted Phenotypic Enhancement	FSW = 0.1140	Class C: plasma membrane endoplasmic reticulum	SEC22 TRANSPORTER
AT5G40770	Predicted Affinity Capture-MS	FSW = 0.0320	Class C: plasma membrane	ATPHB3 (PROHIBITIN 3)
AT1G76030	Predicted synthetic growth defect	FSW = 0.0414	Class C: plasma membrane	VACUOLAR ATP SYNTHASE SUBUNIT B / V-ATPASE B SUBUNIT / VACUOLAR PROTON PUMP B SUBUNIT / V-ATPASE 57 KDA SUBUNIT
AT1G12840	Predicted synthetic growth defect	FSW = 0.0278	Class C: plasma membrane	DET3 (DE-ETIOLATED 3) PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT3G62290	Predicted Phenotypic Enhancement	FSW = 0.0396	Class C: plasma membrane	ATARFA1E (ADP-RIBOSYLATION FACTOR A1E) GTP BINDING / PHOSPHOLIPASE ACTIVATOR/ PROTEIN BINDING
AT1G12360	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0448	Class C: plasma membrane	KEU (KEULE) PROTEIN TRANSPORTER
AT3G16100	Predicted interologs mapping	FSW = 0.0443	Class C: plasma membrane	ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C) GTP BINDING
AT1G59820	Predicted Phenotypic Suppression	FSW = 0.1111	Class C: plasma membrane	ALA3 (AMINOPHOSPHOLIPID ATPASE3) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / PHOSPHOLIPID TRANSPORTER
AT1G12640	Predicted Phenotypic Enhancement	FSW = 0.0103	Class C: plasma membrane	MEMBRANE BOUND O-ACYL TRANSFERASE (MBOAT) FAMILY PROTEIN
AT4G29900	Predicted Synthetic Lethality	FSW = 0.0381	Class C: plasma membrane	ACA10 (AUTOINHIBITED CA(2+)-ATPASE 10) CALCIUM-TRANSPORTING ATPASE/ CALMODULIN BINDING
AT2G32240	Predicted Gene fusion method	FSW = 0.0163	Class C: plasma membrane	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RESPONSE TO CADMIUM ION LOCATED IN PLASMA MEMBRANE EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PREFOLDIN (INTERPROIPR009053) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT1G053203) HAS 221693 BLAST HITS TO 95553 PROTEINS IN 2574 SPECIES ARCHAE - 2848 BACTERIA - 44259 METAZOA - 97474 FUNGI - 15490 PLANTS - 8386 VIRUSES - 1229 OTHER EUKARYOTES - 52007 (SOURCE NCBI BLINK)
AT4G35020	Predicted Synthetic Lethality	FSW = 0.0174	Class C: plasma membrane	ARAC3 (ARABIDOPSIS RAC-LIKE 3) GTP BINDING / GTPASE
AT5G12370	Predicted interologs mapping	FSW = 0.0473	Class C: plasma membrane	SEC10 (EXOCYST COMPLEX COMPONENT SEC10)
AT1G08820	Predicted Phenotypic Enhancement	FSW = 0.0382	Class C: plasma membrane	VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2) STRUCTURAL MOLECULE
AT1G71820	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0657	Class C: plasma membrane	SEC6
AT5G19330	Predicted Phenotypic Enhancement	FSW = 0.0391	Class C: plasma membrane	ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN / BTB/POZ DOMAIN-CONTAINING PROTEIN
AT4G01320	Predicted Phenotypic Enhancement	FSW = 0.0839	Class C: endoplasmic reticulum	ATSTE24 ENDOPEPTIDASE/ METALLOENDOPEPTIDASE
AT5G45130	Predicted Phenotypic Enhancement	FSW = 0.0879	Class C: endoplasmic reticulum	RHA1 (RAB HOMOLOG 1) GTP BINDING
AT3G07180	Predicted Phenotypic Enhancement	FSW = 0.0413	Class C: endoplasmic reticulum	GPI TRANSAMIDASE COMPONENT PIG-S-RELATED
AT5G63840	Predicted Phenotypic Enhancement	FSW = 0.0605	Class C: endoplasmic reticulum	RSW3 (RADIAL SWELLING 3) GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT2G39630	Predicted Phenotypic Enhancement	FSW = 0.0657	Class C: endoplasmic reticulum	GLYCOSYL TRANSFERASE FAMILY 2 PROTEIN
AT1G67490	Predicted Phenotypic Enhancement	FSW = 0.1410	Class C: endoplasmic reticulum	GCS1 (GLUCOSIDASE 1) ALPHA-GLUCOSIDASE
AT3G05710	Predicted Phenotypic Enhancement	FSW = 0.1407	Class C: endoplasmic reticulum	SYP43 (SYNTAXIN OF PLANTS 43) SNAP RECEPTOR
AT5G13490	Predicted Affinity Capture-MS	FSW = 0.0107	Unknown	AAC2 (ADP/ATP CARRIER 2) ATPADP ANTIPORTER/ BINDING
AT1G03860	Predicted Affinity Capture-MS	FSW = 0.0229	Unknown	ATPHB2 (PROHIBITIN 2)
AT5G67500	Predicted Affinity Capture-MS	FSW = 0.0119	Unknown	VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2) VOLTAGE-GATED ANION CHANNEL
AT5G15200	Predicted Affinity Capture-MS	FSW = 0.0063	Unknown	40S RIBOSOMAL PROTEIN S9 (RPS9B)
AT3G18140	Predicted Phenotypic Suppression	FSW = 0.0414	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G45200	Predicted Phenotypic Enhancement	FSW = 0.1761	Unknown	GOS12 (GOLGI SNARE 12) SNARE BINDING
AT1G31780	Predicted Phenotypic Enhancement	FSW = 0.1444	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CONSERVED OLIGOMERIC COMPLEX COG6 (INTERPROIPR010490) HAS 281 BLAST HITS TO 279 PROTEINS IN 131 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 132 FUNGI - 106 PLANTS - 21 VIRUSES - 0 OTHER EUKARYOTES - 20 (SOURCE NCBI BLINK)
AT1G55190	Predicted Phenotypic Enhancement	FSW = 0.0857	Unknown	PRA7
AT1G66580	Predicted Affinity Capture-MS	FSW = 0.0119	Unknown	60S RIBOSOMAL PROTEIN L10 (RPL10C)
AT3G62870	Predicted synthetic growth defect	FSW = 0.0060	Unknown	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT5G13710	Predicted Phenotypic Enhancement	FSW = 0.0444	Unknown	SMT1 (STEROL METHYLTRANSFERASE 1) STEROL 24-C-METHYLTRANSFERASE
AT2G30710	Predicted Phenotypic Enhancement	FSW = 0.1954	Unknown	RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT5G26240	Predicted Phenotypic Enhancement	FSW = 0.0793	Unknown	CLC-D (CHLORIDE CHANNEL D) ANION CHANNEL/ VOLTAGE-GATED CHLORIDE CHANNEL
AT5G67630	Predicted Affinity Capture-MS	FSW = 0.0224	Unknown	DNA HELICASE PUTATIVE
AT5G22330	Predicted Affinity Capture-MS	FSW = 0.0202	Unknown	RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1) PROTEIN BINDING
AT5G16630	Predicted Affinity Capture-MS	FSW = 0.0069	Unknown	RAD4 DAMAGED DNA BINDING
AT2G28190	Predicted Synthetic Rescue Phenotypic Enhancement Synthetic Rescue Phenotypic Enhancement Synthetic Rescue	FSW = 0.1129	Unknown	CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2) SUPEROXIDE DISMUTASE
AT3G11630	Predicted synthetic growth defect	FSW = 0.0325	Unknown	2-CYS PEROXIREDOXIN CHLOROPLAST (BAS1)
AT3G10920	Predicted Synthetic Rescue Phenotypic Enhancement	FSW = 0.0132	Unknown	MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1) METAL ION BINDING / SUPEROXIDE DISMUTASE
AT3G18480	Predicted Phenotypic Enhancement	FSW = 0.0047	Unknown	ATCASP (ARABIDOPSIS THALIANA CCAAT-DISPLACEMENT PROTEIN ALTERNATIVELY SPLICED PRODUCT)
AT3G24350	Predicted Co-purification	FSW = 0.0874	Unknown	SYP32 (SYNTAXIN OF PLANTS 32) SNAP RECEPTOR
AT1G71270	Predicted Phenotypic Enhancement	FSW = 0.0637	Unknown	POK (POKY POLLEN TUBE)
AT2G44660	Predicted Phenotypic Enhancement	FSW = 0.1240	Unknown	TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TRANSFERASE TRANSFERRING HEXOSYL GROUPS
AT5G38460	Predicted Phenotypic Enhancement	FSW = 0.1368	Unknown	ALG6 ALG8 GLYCOSYLTRANSFERASE FAMILY PROTEIN
AT4G39220	Predicted Phenotypic Enhancement	FSW = 0.1550	Unknown	ATRER1A
AT2G31970	Predicted synthetic growth defect	FSW = 0.0454	Unknown	RAD50 ATP BINDING / NUCLEASE/ ZINC ION BINDING
AT1G48160	Predicted Phenotypic Enhancement	FSW = 0.0058	Unknown	SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN PUTATIVE / SRP19 PUTATIVE
AT2G45790	Predicted interologs mapping	FSW = 0.0130	Unknown	PMM (PHOSPHOMANNOMUTASE) PHOSPHOMANNOMUTASE
AT5G20850	Predicted synthetic growth defect	FSW = 0.0338	Unknown	ATRAD51 ATP BINDING / DNA BINDING / DNA-DEPENDENT ATPASE/ DAMAGED DNA BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING / SEQUENCE-SPECIFIC DNA BINDING
AT5G54260	Predicted synthetic growth defect	FSW = 0.0561	Unknown	MRE11 (MEIOTIC RECOMBINATION 11) ENDONUCLEASE/ EXONUCLEASE/ HYDROLASE/ MANGANESE ION BINDING / PROTEIN SERINE/THREONINE PHOSPHATASE
AT1G02145	Predicted Phenotypic Enhancement	FSW = 0.1403	Unknown	TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G01910	Predicted Phenotypic Enhancement	FSW = 0.0833	Unknown	ANION-TRANSPORTING ATPASE PUTATIVE
AT1G04020	Predicted synthetic growth defect	FSW = 0.0872	Unknown	BARD1 (BREAST CANCER ASSOCIATED RING 1) DNA BINDING / TRANSCRIPTION COACTIVATOR
AT1G04730	Predicted synthetic growth defect	FSW = 0.0504	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT1G13640	Predicted Reconstituted Complex Reconstituted Complex two hybrid interologs mapping	FSW = 0.0224	Unknown	PHOSPHATIDYLINOSITOL 3- AND 4-KINASE FAMILY PROTEIN
AT1G16560	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1993	Unknown	PER1-LIKE FAMILY PROTEIN
AT1G16900	Predicted Phenotypic Enhancement	FSW = 0.0706	Unknown	SUGAR BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G20575	Predicted Phenotypic Enhancement	FSW = 0.1185	Unknown	DOLICHYL-PHOSPHATE BETA-D-MANNOSYLTRANSFERASE PUTATIVE / DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE PUTATIVE / MANNOSE-P-DOLICHOL SYNTHASE PUTATIVE
AT1G26450	Predicted Phenotypic Enhancement	FSW = 0.2634	Unknown	BETA-13-GLUCANASE-RELATED
AT1G53710	Predicted interologs mapping	FSW = 0.0309	Unknown	HYDROLASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT1G57600	Predicted Phenotypic Enhancement	FSW = 0.2375	Unknown	MEMBRANE BOUND O-ACYL TRANSFERASE (MBOAT) FAMILY PROTEIN
AT1G66740	Predicted Synthetic Lethality	FSW = 0.0479	Unknown	SGA2
AT1G67190	Predicted synthetic growth defect	FSW = 0.0758	Unknown	F-BOX FAMILY PROTEIN
AT1G69640	Predicted Phenotypic Enhancement	FSW = 0.0920	Unknown	SBH1 (SPHINGOID BASE HYDROXYLASE 1) CATALYTIC/ SPHINGOSINE HYDROXYLASE
AT2G22530	Predicted Phenotypic Enhancement	FSW = 0.2792	Unknown	CATALYTIC/ TRANSFERASE
AT2G28390	Predicted interologs mapping	FSW = 0.0392	Unknown	SAND FAMILY PROTEIN
AT2G34500	Predicted Phenotypic Suppression	FSW = 0.0882	Unknown	CYP710A1 (CYTOCHROME P450 FAMILY 710 SUBFAMILY A POLYPEPTIDE 1) C-22 STEROL DESATURASE/ OXYGEN BINDING
AT2G37550	Predicted Synthetic Lethality	FSW = 0.0572	Unknown	AGD7 ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING
AT2G44580	Predicted synthetic growth defect	FSW = 0.0601	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT2G47760	Predicted Phenotypic Enhancement	FSW = 0.0139	Unknown	ALG3 ALPHA-13-MANNOSYLTRANSFERASE/ CATALYTIC
AT3G01340	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0283	Unknown	PROTEIN TRANSPORT PROTEIN SEC13 FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G12180	Predicted Phenotypic Enhancement	FSW = 0.1485	Unknown	CORNICHON FAMILY PROTEIN
AT3G42660	Predicted synthetic growth defect	FSW = 0.0656	Unknown	NUCLEOTIDE BINDING
AT3G56640	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0227	Unknown	EXOCYST COMPLEX SUBUNIT SEC15-LIKE FAMILY PROTEIN
AT3G58490	Predicted Phenotypic Enhancement	FSW = 0.0354	Unknown	PHOSPHATIDIC ACID PHOSPHATASE FAMILY PROTEIN / PAP2 FAMILY PROTEIN
AT4G14160	Predicted interologs mapping	FSW = 0.0535	Unknown	TRANSPORT PROTEIN PUTATIVE
AT4G17910	Predicted Phenotypic Enhancement	FSW = 0.0430	Unknown	TRANSFERASE TRANSFERRING ACYL GROUPS
AT4G26550	Predicted Phenotypic Suppression	FSW = 0.0680	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SFT2-LIKE (INTERPROIPR011691) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G560201) HAS 452 BLAST HITS TO 452 PROTEINS IN 136 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 198 FUNGI - 89 PLANTS - 61 VIRUSES - 0 OTHER EUKARYOTES - 104 (SOURCE NCBI BLINK)
AT4G26590	Predicted Phenotypic Suppression	FSW = 0.0228	Unknown	OPT5 (OLIGOPEPTIDE TRANSPORTER 5) OLIGOPEPTIDE TRANSPORTER
AT4G27180	Predicted Synthetic Lethality	FSW = 0.0352	Unknown	ATK2 (ARABIDOPSIS THALIANA KINESIN 2) MICROTUBULE BINDING / MICROTUBULE MOTOR
AT4G34450	Predicted interologs mapping	FSW = 0.0464	Unknown	COATOMER GAMMA-2 SUBUNIT PUTATIVE / GAMMA-2 COAT PROTEIN PUTATIVE / GAMMA-2 COP PUTATIVE
AT5G09550	Predicted Phenotypic Suppression interologs mapping	FSW = 0.0648	Unknown	RAB GDP-DISSOCIATION INHIBITOR
AT5G26680	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.0450	Unknown	ENDONUCLEASE PUTATIVE
AT5G27970	Predicted Phenotypic Enhancement	FSW = 0.1433	Unknown	BINDING
AT5G42000	Predicted Phenotypic Enhancement	FSW = 0.1307	Unknown	ORMDL FAMILY PROTEIN
AT1G20610	Predicted interologs mapping	FSW = 0.0070	Unknown	CYCB23 (CYCLIN B23) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G01770	Predicted interologs mapping Synthetic Rescue	FSW = 0.0061	Unknown	VIT1 (VACUOLAR IRON TRANSPORTER 1) IRON ION TRANSMEMBRANE TRANSPORTER
AT2G13680	Predicted Affinity Capture-MS	FSW = 0.0252	Unknown	CALS5 (CALLOSE SYNTHASE 5) 13-BETA-GLUCAN SYNTHASE

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Proteins

DNA

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT1G07670 - ( calcium-transporting ATPase )

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