Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G57600 - ( membrane bound O-acyl transferase (MBOAT) family protein )
61 Proteins interacs with AT1G57600Locus | Method | FSW ![]() | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT5G61790![]() ![]() ![]() ![]() | PredictedSynthetic LethalityPhenotypic Enhancement | FSW = 0.1656
| Unknown | CALNEXIN 1 (CNX1) |
AT5G07340![]() ![]() ![]() ![]() | Predictedinteraction prediction | FSW = 0.0150
| Unknown | CALNEXIN PUTATIVE |
AT4G19640![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.0819
| Unknown | ARA7 GTP BINDING |
AT2G44610![]() ![]() ![]() ![]() | Predictedinteraction prediction | FSW = 0.1016
| Unknown | RAB6A GTP BINDING / PROTEIN BINDING |
AT2G45200![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.2147
| Unknown | GOS12 (GOLGI SNARE 12) SNARE BINDING |
AT5G45130![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.1011
| Unknown | RHA1 (RAB HOMOLOG 1) GTP BINDING |
AT2G30710![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.3630
| Unknown | RABGAP/TBC DOMAIN-CONTAINING PROTEIN |
AT5G13710![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.1024
| Unknown | SMT1 (STEROL METHYLTRANSFERASE 1) STEROL 24-C-METHYLTRANSFERASE |
AT2G45130![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0597
| Unknown | SPX3 (SPX DOMAIN GENE 3) |
AT5G63840![]() ![]() ![]() ![]() | PredictedSynthetic Lethalityinterologs mappingPhenotypic Enhancementinteraction prediction | FSW = 0.2051
| Unknown | RSW3 (RADIAL SWELLING 3) GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS |
AT1G07420![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.0961
| Unknown | SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1) 4-ALPHA-METHYL-DELTA7-STEROL-4ALPHA-METHYL OXIDASE/ C-4 METHYLSTEROL OXIDASE |
AT1G06470![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Suppression | FSW = 0.1412
| Unknown | PHOSPHATE TRANSLOCATOR-RELATED |
AT1G09210![]() ![]() ![]() ![]() | Predictedinterologs mappingSynthetic Lethality | FSW = 0.1916
| Unknown | CALRETICULIN 2 (CRT2) |
AT1G08560![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.0730
| Unknown | SYP111 (SYNTAXIN OF PLANTS 111) SNAP RECEPTOR |
AT1G59820![]() ![]() ![]() ![]() | PredictedPhenotypic Suppression | FSW = 0.1269
| Unknown | ALA3 (AMINOPHOSPHOLIPID ATPASE3) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / PHOSPHOLIPID TRANSPORTER |
AT5G17770![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Suppression | FSW = 0.0529
| Unknown | ATCBR (ARABIDOPSIS THALIANA NADHCYTOCHROME B5 REDUCTASE 1) CYTOCHROME-B5 REDUCTASE |
AT5G23630![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.3033
| Unknown | ATPASE E1-E2 TYPE FAMILY PROTEIN / HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILIY PROTEIN |
AT1G07670![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.2375
| Unknown | CALCIUM-TRANSPORTING ATPASE |
AT5G52640![]() ![]() ![]() ![]() | PredictedSynthetic Lethality | FSW = 0.0526
| Unknown | ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING |
AT3G03800![]() ![]() ![]() ![]() | PredictedPhenotypic Suppression | FSW = 0.0980
| Unknown | SYP131 (SYNTAXIN OF PLANTS 131) SNAP RECEPTOR |
AT1G13210![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.1319
| Unknown | ACAL (AUTOINHIBITED CA2+/ATPASE II) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF IONS PHOSPHORYLATIVE MECHANISM / CALMODULIN BINDING |
AT1G09930![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.0693
| Unknown | ATOPT2 OLIGOPEPTIDE TRANSPORTER |
AT5G19330![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.0580
| Unknown | ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN / BTB/POZ DOMAIN-CONTAINING PROTEIN |
AT2G17520![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.1514
| Unknown | IRE1A ENDORIBONUCLEASE/ KINASE |
AT2G26660![]() ![]() ![]() ![]() | Predictedtwo hybridinteraction prediction | FSW = 0.0539
| Unknown | SPX2 (SPX DOMAIN GENE 2) |
AT1G79830![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Suppression | FSW = 0.1124
| Unknown | GC5 (GOLGIN CANDIDATE 5) PROTEIN BINDING |
AT2G22290![]() ![]() ![]() ![]() | PredictedSynthetic Lethality | FSW = 0.0987
| Unknown | ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D) GTP BINDING |
AT5G18280![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.4268
| Unknown | ATAPY2 (ARABIDOPSIS THALIANA APYRASE 2) ATPASE/ NUCLEOTIDE DIPHOSPHATASE |
AT1G71270![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.2439
| Unknown | POK (POKY POLLEN TUBE) |
AT1G04980![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.0323
| Unknown | ATPDIL2-2 (PDI-LIKE 2-2) PROTEIN DISULFIDE ISOMERASE |
AT1G10130![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.2350
| Unknown | ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3) CALCIUM-TRANSPORTING ATPASE/ CALMODULIN BINDING / MANGANESE-TRANSPORTING ATPASE/ PEROXIDASE |
AT1G67490![]() ![]() ![]() ![]() | PredictedPhenotypic EnhancementSynthetic Lethalityinteraction prediction | FSW = 0.2048
| Unknown | GCS1 (GLUCOSIDASE 1) ALPHA-GLUCOSIDASE |
AT2G39630![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.2893
| Unknown | GLYCOSYL TRANSFERASE FAMILY 2 PROTEIN |
AT3G05710![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.2790
| Unknown | SYP43 (SYNTAXIN OF PLANTS 43) SNAP RECEPTOR |
AT1G01020![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.0905
| Unknown | ARV1 |
AT5G38460![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.2516
| Unknown | ALG6 ALG8 GLYCOSYLTRANSFERASE FAMILY PROTEIN |
AT2G44660![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.2541
| Unknown | TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TRANSFERASE TRANSFERRING HEXOSYL GROUPS |
AT4G39220![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.3326
| Unknown | ATRER1A |
AT3G12380![]() ![]() ![]() ![]() | Predictedtwo hybrid | FSW = 0.0147
| Unknown | ATARP5 (ACTIN-RELATED PROTEIN 5) STRUCTURAL CONSTITUENT OF CYTOSKELETON |
AT1G16560![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Suppression | FSW = 0.4390
| Unknown | PER1-LIKE FAMILY PROTEIN |
AT1G02145![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.1741
| Unknown | TRANSFERASE TRANSFERRING GLYCOSYL GROUPS |
AT1G26450![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.3993
| Unknown | BETA-13-GLUCANASE-RELATED |
AT1G73570![]() ![]() ![]() ![]() | PredictedSynthetic LethalitySynthetic Lethality | FSW = 0.0403
| Unknown | SUPPRESSOR OF LIN-12-LIKE PROTEIN-RELATED / SEL-1 PROTEIN-RELATED |
AT2G22530![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.3036
| Unknown | CATALYTIC/ TRANSFERASE |
AT2G34500![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.2048
| Unknown | CYP710A1 (CYTOCHROME P450 FAMILY 710 SUBFAMILY A POLYPEPTIDE 1) C-22 STEROL DESATURASE/ OXYGEN BINDING |
AT2G47760![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.0294
| Unknown | ALG3 ALPHA-13-MANNOSYLTRANSFERASE/ CATALYTIC |
AT3G06460![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Suppression | FSW = 0.0252
| Unknown | GNS1/SUR4 MEMBRANE FAMILY PROTEIN |
AT4G26590![]() ![]() ![]() ![]() | PredictedPhenotypic Suppression | FSW = 0.0568
| Unknown | OPT5 (OLIGOPEPTIDE TRANSPORTER 5) OLIGOPEPTIDE TRANSPORTER |
AT4G39830![]() ![]() ![]() ![]() | Predictedtwo hybridinteraction prediction | FSW = 0.0693
| Unknown | L-ASCORBATE OXIDASE PUTATIVE |
AT5G10260![]() ![]() ![]() ![]() | PredictedSynthetic Lethality | FSW = 0.0792
| Unknown | ATRABH1E (ARABIDOPSIS RAB GTPASE HOMOLOG H1E) GTP BINDING |
AT5G27970 | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.1622
| Unknown | BINDING |
AT1G80460![]() ![]() ![]() ![]() | PredictedPhenotypic Enhancement | FSW = 0.0138
| Unknown | NHO1 (NONHOST RESISTANCE TO P S PHASEOLICOLA 1) CARBOHYDRATE KINASE/ GLYCEROL KINASE |
AT2G34770![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Suppression | FSW = 0.2899
| Unknown | FAH1 (FATTY ACID HYDROXYLASE 1) CATALYTIC/ FATTY ACID ALPHA-HYDROXYLASE |
AT3G05000![]() ![]() ![]() ![]() | Predictedinterologs mappingPhenotypic Enhancement | FSW = 0.1292
| Unknown | TRANSPORT PROTEIN PARTICLE (TRAPP) COMPONENT BET3 FAMILY PROTEIN |
AT5G13060![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.0812
| Unknown | ABAP1 (ARMADILLO BTB ARABIDOPSIS PROTEIN 1) PROTEIN BINDING |
AT5G02410![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.1124
| Unknown | DIE2/ALG10 FAMILY |
AT3G04080![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.3600
| Unknown | ATAPY1 (APYRASE 1) ATPASE/ CALMODULIN BINDING / NUCLEOTIDE DIPHOSPHATASE |
AT2G28850![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.2058
| Unknown | CYP710A3 (CYTOCHROME P450 FAMILY 710 SUBFAMILY A POLYPEPTIDE 3) ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING / MONOOXYGENASE/ OXYGEN BINDING |
AT2G18240![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.3202
| Unknown | RER1 PROTEIN PUTATIVE |
AT1G09460![]() ![]() ![]() ![]() | Predictedinterologs mapping | FSW = 0.3504
| Unknown | GLUCAN ENDO-13-BETA-GLUCOSIDASE-RELATED |
AT1G24320![]() ![]() ![]() ![]() | Predictedinterologs mappingSynthetic Lethality | FSW = 0.1634
| Unknown | ALPHA-GLUCOSIDASE PUTATIVE |
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Quick help
Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454