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AT5G02500 - ( HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) ATP binding )

44 Proteins interacs with AT5G02500

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT3G26090	Experimental pull down	FSW = 0.0681	Class A: plasma membrane Class B: vacuole plastid peroxisome nucleus Class D: cytosol (p = 0.67)	RGS1 (REGULATOR OF G-PROTEIN SIGNALING 1) G-PROTEIN COUPLED RECEPTOR
AT5G22290	Experimental pull down	FSW = 0.0214	Class A: nucleus Class B: vacuole plastid plasma membrane peroxisome cytosol Class D: cytosol (p = 0.67)	ANAC089 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 89) TRANSCRIPTION FACTOR
AT4G23570	Experimental	FSW = 0.0726	Class A: nucleus Class B: vacuole plastid plasma membrane peroxisome Class D: cytosol (p = 0.67)	SGT1A PROTEIN BINDING
AT4G17750	Experimental two hybrid	FSW = 0.0395	Class A: nucleus Class B: vacuole plastid plasma membrane peroxisome	HSF1 (HEAT SHOCK FACTOR 1) DNA BINDING / PROTEIN BINDING / TRANSCRIPTION FACTOR
AT2G01950	Experimental phage display	FSW = 0.0051	Class D: cytosol (p = 0.67)	BRL2 (BRI1-LIKE 2) ATP BINDING / PROTEIN SERINE/THREONINE KINASE/ TRANSMEMBRANE RECEPTOR PROTEIN SERINE/THREONINE KINASE
AT4G14640	Experimental protein array	FSW = 0.0029	Unknown	CAM8 (CALMODULIN 8) CALCIUM ION BINDING
AT5G07220	Experimental far western blotting	FSW = 0.0196	Unknown	ATBAG3 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 3) PROTEIN BINDING
AT1G12060	Experimental far western blotting	FSW = 0.0189	Unknown	ATBAG5 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 5) PROTEIN BINDING
AT4G11260	Experimental interaction detection method interaction detection method filter binding confocal microscopy pull down	FSW = 0.1571	Unknown	SGT1B PROTEIN BINDING
AT5G15090	Predicted Affinity Capture-MS	FSW = 0.0100	Class C: vacuole plastid plasma membrane nucleus	VDAC3 (VOLTAGE DEPENDENT ANION CHANNEL 3) VOLTAGE-GATED ANION CHANNEL
AT5G42020	Predicted Gene neighbors method Phylogenetic profile method	FSW = 0.0466	Class C: vacuole plasma membrane nucleus	BIP2 ATP BINDING
AT3G09440	Predicted Phylogenetic profile method Co-expression	FSW = 0.0966	Class C: vacuole plasma membrane nucleus	HEAT SHOCK COGNATE 70 KDA PROTEIN 3 (HSC70-3) (HSP70-3)
AT3G12580	Predicted Shared biological function Phylogenetic profile method Co-expression	FSW = 0.0898	Class C: vacuole plasma membrane	HSP70 (HEAT SHOCK PROTEIN 70) ATP BINDING
AT2G30970	Predicted in vivo in vitro Affinity Capture-MS	FSW = 0.0690	Class C: vacuole	ASP1 (ASPARTATE AMINOTRANSFERASE 1) L-ASPARTATE2-OXOGLUTARATE AMINOTRANSFERASE
AT3G62870	Predicted synthetic growth defect	FSW = 0.0115	Class C: vacuole	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT1G16030	Predicted Shared biological function Phylogenetic profile method Co-expression	FSW = 0.0622	Class C: plastid plasma membrane	HSP70B (HEAT SHOCK PROTEIN 70B) ATP BINDING
AT1G56410	Predicted Shared biological function Phylogenetic profile method Co-expression	FSW = 0.1795	Class C: plastid	ERD2 (EARLY-RESPONSIVE TO DEHYDRATION 2) ATP BINDING
AT1G69740	Predicted Affinity Capture-MS	FSW = 0.0142	Class C: plastid	HEMB1 CATALYTIC/ METAL ION BINDING / PORPHOBILINOGEN SYNTHASE
AT5G52640	Predicted in vivo Affinity Capture-MS	FSW = 0.0100	Class C: plasma membrane	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT5G02490	Predicted Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.1089	Class C: plasma membrane	HEAT SHOCK COGNATE 70 KDA PROTEIN 2 (HSC70-2) (HSP70-2)
AT1G11960	Predicted Reconstituted Complex Co-purification Affinity Capture-Western Reconstituted Complex Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western interologs mapping Co-purification Synthetic Lethality	FSW = 0.1333	Class C: plasma membrane	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN PLASMA MEMBRANE EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF221 (INTERPROIPR003864) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED (TAIRAT1G623201) HAS 746 BLAST HITS TO 706 PROTEINS IN 111 SPECIES ARCHAE - 0 BACTERIA - 4 METAZOA - 131 FUNGI - 370 PLANTS - 224 VIRUSES - 0 OTHER EUKARYOTES - 17 (SOURCE NCBI BLINK)
AT3G11730	Predicted Affinity Capture-MS	FSW = 0.0093	Class C: plasma membrane	ATFP8 GTP BINDING / GTP-DEPENDENT PROTEIN BINDING / MYOSIN XI TAIL BINDING
AT4G14350	Predicted Phenotypic Enhancement	FSW = 0.0392	Class C: plasma membrane	PROTEIN KINASE FAMILY PROTEIN
AT1G02680	Predicted Affinity Capture-MS	FSW = 0.0060	Class C: nucleus	TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT3G19840	Predicted Affinity Capture-MS	FSW = 0.0392	Class C: nucleus	FF DOMAIN-CONTAINING PROTEIN / WW DOMAIN-CONTAINING PROTEIN
AT1G67970	Predicted in vivo in vitro Affinity Capture-MS	FSW = 0.0833	Class C: nucleus	AT-HSFA8 DNA BINDING / TRANSCRIPTION FACTOR
AT3G14980	Predicted Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Co-purification Affinity Capture-MS	FSW = 0.1228	Class C: nucleus	PHD FINGER TRANSCRIPTION FACTOR PUTATIVE
AT4G10040	Predicted Affinity Capture-MS in vivo in vitro	FSW = 0.0311	Unknown	CYTC-2 (CYTOCHROME C-2) ELECTRON CARRIER/ HEME BINDING / IRON ION BINDING
AT2G32720	Predicted Affinity Capture-Western	FSW = 0.0952	Unknown	CB5-B (CYTOCHROME B5 ISOFORM B) HEME BINDING
AT3G10610	Predicted Co-purification	FSW = 0.0162	Unknown	40S RIBOSOMAL PROTEIN S17 (RPS17C)
AT1G05180	Predicted Synthetic Lethality	FSW = 0.0227	Unknown	AXR1 (AUXIN RESISTANT 1) SMALL PROTEIN ACTIVATING ENZYME
AT3G09350	Predicted in vitro two hybrid Affinity Capture-MS	FSW = 0.0577	Unknown	ARMADILLO/BETA-CATENIN REPEAT FAMILY PROTEIN
AT2G15790	Predicted in vitro Reconstituted Complex	FSW = 0.0513	Unknown	SQN (SQUINT) PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
AT5G26360	Predicted in vivo Affinity Capture-MS	FSW = 0.0167	Unknown	CHAPERONIN PUTATIVE
AT5G25530	Predicted Affinity Capture-MS	FSW = 0.0622	Unknown	DNAJ HEAT SHOCK PROTEIN PUTATIVE
AT3G09640	Predicted Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Co-purification Reconstituted Complex	FSW = 0.0596	Unknown	APX2 (ASCORBATE PEROXIDASE 2) L-ASCORBATE PEROXIDASE
AT3G27580	Predicted Affinity Capture-MS	FSW = 0.0353	Unknown	ATPK7 KINASE/ PROTEIN SERINE/THREONINE KINASE
AT4G32140	Predicted Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Co-purification	FSW = 0.2172	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM MEMBRANE EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF6 TRANSMEMBRANE (INTERPROIPR000620) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS MEMBRANE PROTEIN (TAIRAT3G070801) HAS 1078 BLAST HITS TO 1078 PROTEINS IN 273 SPECIES ARCHAE - 20 BACTERIA - 294 METAZOA - 244 FUNGI - 147 PLANTS - 41 VIRUSES - 0 OTHER EUKARYOTES - 332 (SOURCE NCBI BLINK)
AT1G10090	Predicted Phenotypic Enhancement	FSW = 0.0097	Unknown	UNKNOWN PROTEIN
AT2G31020	Predicted Affinity Capture-MS	FSW = 0.0212	Unknown	ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A) OXYSTEROL BINDING
AT5G17330	Predicted Phenotypic Enhancement	FSW = 0.1412	Unknown	GAD CALMODULIN BINDING / GLUTAMATE DECARBOXYLASE
AT5G38890	Predicted Affinity Capture-MS	FSW = 0.0248	Unknown	EXORIBONUCLEASE-RELATED
AT5G47080	Predicted Affinity Capture-MS	FSW = 0.0071	Unknown	CKB1 PROTEIN KINASE REGULATOR
AT5G54960	Predicted Affinity Capture-MS	FSW = 0.0288	Unknown	PDC2 (PYRUVATE DECARBOXYLASE-2) CARBOXY-LYASE/ CATALYTIC/ MAGNESIUM ION BINDING / PYRUVATE DECARBOXYLASE/ THIAMIN PYROPHOSPHATE BINDING

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

AtPIN will be upgraded. Please send your suggestions here

AT5G02500 - ( HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1) ATP binding )

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Fasta sequences:

Quick help

FSW

C3

PEP

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