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AT1G74710 - ( isochorismate synthase 1 (ICS1) / isochorismate mutase )

135 Proteins interacs with AT1G74710

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT3G63130	Predicted synthetic growth defect	FSW = 0.0063	Class C: plastid nucleus	RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1) RAN GTPASE ACTIVATOR/ PROTEIN BINDING
AT3G14420	Predicted synthetic growth defect	FSW = 0.0423	Class C: plastid nucleus	(S)-2-HYDROXY-ACID OXIDASE PEROXISOMAL PUTATIVE / GLYCOLATE OXIDASE PUTATIVE / SHORT CHAIN ALPHA-HYDROXY ACID OXIDASE PUTATIVE
AT5G65430	Predicted synthetic growth defect	FSW = 0.0525	Class C: plastid nucleus	GRF8 (GENERAL REGULATORY FACTOR 8) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT2G33210	Predicted pull down	FSW = 0.0055	Class C: plastid	HSP60-2 (HEAT SHOCK PROTEIN 60-2) ATP BINDING
AT5G11710	Predicted synthetic growth defect	FSW = 0.0322	Class C: plastid	EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN-CONTAINING PROTEIN / CLATHRIN ASSEMBLY PROTEIN-RELATED
AT3G22890	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.2114	Class C: plastid	APS1 (ATP SULFURYLASE 1) SULFATE ADENYLYLTRANSFERASE (ATP)
AT3G08530	Predicted synthetic growth defect	FSW = 0.0204	Class C: plastid	CLATHRIN HEAVY CHAIN PUTATIVE
AT5G09660	Predicted synthetic growth defect	FSW = 0.1850	Class C: plastid	PMDH2 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 2) MALATE DEHYDROGENASE
AT2G44350	Predicted Affinity Capture-MS	FSW = 0.0677	Class C: plastid	ATCS ATP BINDING / ATP CITRATE SYNTHASE/ CITRATE (SI)-SYNTHASE
AT1G11860	Predicted synthetic growth defect	FSW = 0.0185	Class C: plastid	AMINOMETHYLTRANSFERASE PUTATIVE
AT3G48870	Predicted synthetic growth defect	FSW = 0.0338	Class C: plastid	HSP93-III ATP BINDING / ATPASE/ DNA BINDING / NUCLEASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT1G51040	Predicted Affinity Capture-MS	FSW = 0.0402	Class C: plastid	PHOSPHATIDYLINOSITOL 4-KINASE PUTATIVE
AT3G23940	Predicted Affinity Capture-MS	FSW = 0.1079	Class C: plastid	DEHYDRATASE FAMILY
AT4G25910	Predicted synthetic growth defect	FSW = 0.1226	Class C: plastid	NFU3 STRUCTURAL MOLECULE
AT5G15450	Predicted synthetic growth defect	FSW = 0.1566	Class C: plastid	CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT5G51820	Predicted synthetic growth defect	FSW = 0.1056	Class C: plastid	PGM (PHOSPHOGLUCOMUTASE) PHOSPHOGLUCOMUTASE
AT1G48860	Predicted synthetic growth defect	FSW = 0.1938	Class C: plastid	3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE PUTATIVE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE PUTATIVE / EPSP SYNTHASE PUTATIVE
AT5G49030	Predicted synthetic growth defect	FSW = 0.0386	Class C: plastid	OVA2 (OVULE ABORTION 2) ATP BINDING / AMINOACYL-TRNA LIGASE/ CATALYTIC/ ISOLEUCINE-TRNA LIGASE/ NUCLEOTIDE BINDING
AT4G30310	Predicted synthetic growth defect	FSW = 0.0741	Class C: plastid	RIBITOL KINASE PUTATIVE
AT2G31910	Predicted synthetic growth defect	FSW = 0.1255	Class C: plastid	ATCHX21 (CATION/H+ EXCHANGER 21) SODIUMHYDROGEN ANTIPORTER
AT1G18870	Predicted Phylogenetic profile method Co-expression	FSW = 0.0090	Class C: plastid	ICS2 (ISOCHORISMATE SYNTHASE 2) ISOCHORISMATE SYNTHASE
AT2G36530	Predicted Affinity Capture-MS	FSW = 0.0853	Class C: nucleus	LOS2 COPPER ION BINDING / PHOSPHOPYRUVATE HYDRATASE
AT1G16240	Predicted synthetic growth defect	FSW = 0.0232	Class C: nucleus	SYP51 (SYNTAXIN OF PLANTS 51) SNAP RECEPTOR
AT5G60540	Predicted synthetic growth defect	FSW = 0.1920	Class C: nucleus	PDX2 (PYRIDOXINE BIOSYNTHESIS 2) GLUTAMINASE/ GLUTAMINYL-TRNA SYNTHASE (GLUTAMINE-HYDROLYZING)/ PROTEIN HETERODIMERIZATION
AT2G33370	Predicted synthetic growth defect	FSW = 0.0481	Class C: nucleus	60S RIBOSOMAL PROTEIN L23 (RPL23B)
AT2G44680	Predicted synthetic growth defect	FSW = 0.0211	Class C: nucleus	CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE
AT1G76300	Predicted synthetic growth defect	FSW = 0.0720	Class C: nucleus	SMD3 (SNRNP CORE PROTEIN SMD3)
AT4G09800	Predicted synthetic growth defect	FSW = 0.0514	Class C: nucleus	RPS18C (S18 RIBOSOMAL PROTEIN) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT2G33540	Predicted synthetic growth defect	FSW = 0.0266	Class C: nucleus	CPL3 (C-TERMINAL DOMAIN PHOSPHATASE-LIKE 3) CTD PHOSPHATASE/ PHOSPHOPROTEIN PHOSPHATASE
AT4G25340	Predicted synthetic growth defect	FSW = 0.1541	Class C: nucleus	IMMUNOPHILIN-RELATED / FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
AT3G28715	Predicted synthetic growth defect	FSW = 0.0581	Unknown	H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT4G37910	Predicted pull down	FSW = 0.0054	Unknown	MTHSC70-1 (MITOCHONDRIAL HEAT SHOCK PROTEIN 70-1) ATP BINDING
AT1G31780	Predicted Affinity Capture-MS	FSW = 0.0322	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CONSERVED OLIGOMERIC COMPLEX COG6 (INTERPROIPR010490) HAS 281 BLAST HITS TO 279 PROTEINS IN 131 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 132 FUNGI - 106 PLANTS - 21 VIRUSES - 0 OTHER EUKARYOTES - 20 (SOURCE NCBI BLINK)
AT2G45170	Predicted synthetic growth defect	FSW = 0.1025	Unknown	ATATG8E MICROTUBULE BINDING
AT3G57990	Predicted Synthetic Lethality	FSW = 0.0634	Unknown	UNKNOWN PROTEIN
AT3G62870	Predicted synthetic growth defect	FSW = 0.0727	Unknown	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT4G29210	Predicted synthetic growth defect	FSW = 0.0497	Unknown	GGT4 (GAMMA-GLUTAMYL TRANSPEPTIDASE 4) GAMMA-GLUTAMYLTRANSFERASE/ GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE
AT1G20090	Predicted synthetic growth defect	FSW = 0.0842	Unknown	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) GTP BINDING
AT1G04750	Predicted synthetic growth defect	FSW = 0.2194	Unknown	VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)
AT5G47700	Predicted synthetic growth defect	FSW = 0.0305	Unknown	60S ACIDIC RIBOSOMAL PROTEIN P1 (RPP1C)
AT5G62300	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0177	Unknown	40S RIBOSOMAL PROTEIN S20 (RPS20C)
AT2G37790	Predicted synthetic growth defect	FSW = 0.1286	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT4G18800	Predicted synthetic growth defect	FSW = 0.1242	Unknown	ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D) GTP BINDING
AT3G52400	Predicted synthetic growth defect	FSW = 0.0851	Unknown	SYP122 (SYNTAXIN OF PLANTS 122) SNAP RECEPTOR
AT5G45380	Predicted synthetic growth defect	FSW = 0.0323	Unknown	SODIUMSOLUTE SYMPORTER FAMILY PROTEIN
AT3G48760	Predicted synthetic growth defect	FSW = 0.0537	Unknown	ZINC FINGER (DHHC TYPE) FAMILY PROTEIN
AT2G17270	Predicted synthetic growth defect	FSW = 0.0292	Unknown	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT2G30160	Predicted synthetic growth defect	FSW = 0.1815	Unknown	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN
AT2G14610	Predicted synthetic growth defect	FSW = 0.0173	Unknown	PR1 (PATHOGENESIS-RELATED GENE 1)
AT3G54840	Predicted synthetic growth defect	FSW = 0.2029	Unknown	ARA6 GTP BINDING / GTPASE
AT4G39200	Predicted Synthetic Lethality	FSW = 0.1798	Unknown	40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT4G30800	Predicted synthetic growth defect	FSW = 0.0341	Unknown	40S RIBOSOMAL PROTEIN S11 (RPS11B)
AT5G62160	Predicted synthetic growth defect	FSW = 0.0847	Unknown	ATZIP12 (ZINC TRANSPORTER 12 PRECURSOR) CATION TRANSMEMBRANE TRANSPORTER/ METAL ION TRANSMEMBRANE TRANSPORTER
AT4G17190	Predicted synthetic growth defect Affinity Capture-MS	FSW = 0.1303	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT4G16420	Predicted synthetic growth defect	FSW = 0.0852	Unknown	ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR
AT5G36890	Predicted pull down	FSW = 0.0052	Unknown	BGLU42 (BETA GLUCOSIDASE 42) BETA-GLUCOSIDASE/ CATALYTIC/ CATION BINDING / HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G15240	Predicted synthetic growth defect	FSW = 0.0263	Unknown	PHOX (PX) DOMAIN-CONTAINING PROTEIN
AT1G15440	Predicted synthetic growth defect	FSW = 0.0566	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G20693	Predicted synthetic growth defect Synthetic Lethality	FSW = 0.3319	Unknown	HMGB2 (HIGH MOBILITY GROUP B 2) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT1G21370	Predicted synthetic growth defect	FSW = 0.1648	Unknown	UNKNOWN PROTEIN
AT1G21900	Predicted synthetic growth defect	FSW = 0.0623	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G23460	Predicted synthetic growth defect	FSW = 0.1153	Unknown	POLYGALACTURONASE
AT1G25155	Predicted Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-MS	FSW = 0.7290	Unknown	ANTHRANILATE SYNTHASE BETA SUBUNIT PUTATIVE
AT1G25260	Predicted Affinity Capture-MS	FSW = 0.0467	Unknown	ACIDIC RIBOSOMAL PROTEIN P0-RELATED
AT1G25500	Predicted synthetic growth defect	FSW = 0.0284	Unknown	CHOLINE TRANSPORTER-RELATED
AT1G27040	Predicted synthetic growth defect	FSW = 0.1142	Unknown	NITRATE TRANSPORTER PUTATIVE
AT1G27080	Predicted synthetic growth defect	FSW = 0.0748	Unknown	NRT16 (NITRATE TRANSPORTER 16) LOW AFFINITY NITRATE TRANSMEMBRANE TRANSPORTER/ TRANSPORTER
AT1G27320	Predicted Affinity Capture-MS	FSW = 0.1516	Unknown	AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) CYTOKININ RECEPTOR/ OSMOSENSOR/ PROTEIN HISTIDINE KINASE
AT1G32480	Predicted Affinity Capture-MS Affinity Capture-Western	FSW = 0.0185	Unknown	OXIDOREDUCTASE/ OXIDOREDUCTASE ACTING ON THE CH-OH GROUP OF DONORS NAD OR NADP AS ACCEPTOR
AT1G34580	Predicted synthetic growth defect	FSW = 0.0982	Unknown	MONOSACCHARIDE TRANSPORTER PUTATIVE
AT1G35350	Predicted synthetic growth defect	FSW = 0.3152	Unknown	LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G47830	Predicted synthetic growth defect	FSW = 0.1506	Unknown	CLATHRIN COAT ASSEMBLY PROTEIN PUTATIVE
AT1G53270	Predicted Synthetic Lethality	FSW = 0.0116	Unknown	ABC TRANSPORTER FAMILY PROTEIN
AT1G55300	Predicted synthetic growth defect	FSW = 0.1543	Unknown	TAF7 (TBP-ASSOCIATED FACTOR 7) GENERAL RNA POLYMERASE II TRANSCRIPTION FACTOR
AT1G56090	Predicted synthetic growth defect	FSW = 0.0571	Unknown	TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN
AT1G57620	Predicted synthetic growth defect	FSW = 0.0175	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G60680	Predicted synthetic growth defect	FSW = 0.0839	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G11510	Predicted synthetic growth defect	FSW = 0.2019	Unknown	DNA-BINDING STOREKEEPER PROTEIN-RELATED
AT2G43190	Predicted two hybrid	FSW = 0.0113	Unknown	RIBONUCLEASE P FAMILY PROTEIN
AT3G22290	Predicted synthetic growth defect	FSW = 0.2857	Unknown	UNKNOWN PROTEIN
AT3G24010	Predicted Synthetic Lethality	FSW = 0.2632	Unknown	ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT3G45240	Predicted synthetic growth defect	FSW = 0.1686	Unknown	GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1) KINASE
AT3G53030	Predicted Synthetic Lethality	FSW = 0.2398	Unknown	SRPK4 (SER/ARG-RICH PROTEIN KINASE 4) KINASE/ PROTEIN KINASE
AT4G02900	Predicted Phenotypic Enhancement	FSW = 0.0075	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT4G21490	Predicted synthetic growth defect	FSW = 0.2287	Unknown	NDB3 NADH DEHYDROGENASE
AT4G27130	Predicted synthetic growth defect	FSW = 0.2543	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT4G29580	Predicted synthetic growth defect	FSW = 0.1079	Unknown	CYTIDINE DEAMINASE PUTATIVE / CYTIDINE AMINOHYDROLASE PUTATIVE
AT4G33200	Predicted Affinity Capture-MS	FSW = 0.0209	Unknown	XI-I MOTOR/ PROTEIN BINDING
AT5G16980	Predicted synthetic growth defect	FSW = 0.2266	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT1G74810	Predicted Synthetic Lethality	FSW = 0.0498	Unknown	BOR5 ANION EXCHANGER
AT1G76920	Predicted synthetic growth defect	FSW = 0.0410	Unknown	F-BOX FAMILY PROTEIN (FBX3)
AT1G79210	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0358	Unknown	20S PROTEASOME ALPHA SUBUNIT B PUTATIVE
AT2G03130	Predicted synthetic growth defect	FSW = 0.1941	Unknown	RIBOSOMAL PROTEIN L12 FAMILY PROTEIN
AT2G03250	Predicted synthetic growth defect	FSW = 0.1757	Unknown	EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN
AT2G15910	Predicted synthetic growth defect	FSW = 0.1002	Unknown	CSL ZINC FINGER DOMAIN-CONTAINING PROTEIN
AT2G16740	Predicted Affinity Capture-MS	FSW = 0.0283	Unknown	UBC29 (UBIQUITIN-CONJUGATING ENZYME 29) UBIQUITIN-PROTEIN LIGASE
AT2G19910	Predicted Affinity Capture-MS	FSW = 0.0226	Unknown	RNA-DEPENDENT RNA POLYMERASE FAMILY PROTEIN
AT2G24960	Predicted Synthetic Lethality	FSW = 0.1321	Unknown	UNKNOWN PROTEIN
AT2G25280	Predicted synthetic growth defect	FSW = 0.0541	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S MEDIATOR OF ERBB2-DRIVEN CELL MOTILITY (MEMO) RELATED (INTERPROIPR002737) HAS 742 BLAST HITS TO 742 PROTEINS IN 323 SPECIES ARCHAE - 138 BACTERIA - 240 METAZOA - 132 FUNGI - 82 PLANTS - 26 VIRUSES - 0 OTHER EUKARYOTES - 124 (SOURCE NCBI BLINK)
AT2G30800	Predicted synthetic growth defect	FSW = 0.0846	Unknown	HVT1 (HELICASE IN VASCULAR TISSUE AND TAPETUM) ATP BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G37420	Predicted synthetic growth defect	FSW = 0.2168	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT2G47090	Predicted synthetic growth defect	FSW = 0.0385	Unknown	NUCLEIC ACID BINDING / PROTEIN BINDING / ZINC ION BINDING
AT2G48100	Predicted synthetic growth defect	FSW = 0.1151	Unknown	EXONUCLEASE FAMILY PROTEIN
AT3G02320	Predicted Synthetic Lethality	FSW = 0.1242	Unknown	RNA BINDING / TRNA (GUANINE-N2-)-METHYLTRANSFERASE
AT3G03080	Predicted synthetic growth defect	FSW = 0.0828	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT3G11230	Predicted synthetic growth defect	FSW = 0.2102	Unknown	YIPPEE FAMILY PROTEIN
AT3G14390	Predicted synthetic growth defect	FSW = 0.0406	Unknown	DIAMINOPIMELATE DECARBOXYLASE PUTATIVE / DAP CARBOXYLASE PUTATIVE
AT3G18660	Predicted Affinity Capture-MS	FSW = 0.2615	Unknown	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G18860	Predicted synthetic growth defect	FSW = 0.0128	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G20650	Predicted Affinity Capture-MS	FSW = 0.0133	Unknown	MRNA CAPPING ENZYME FAMILY PROTEIN
AT3G24830	Predicted synthetic growth defect	FSW = 0.0093	Unknown	60S RIBOSOMAL PROTEIN L13A (RPL13AB)
AT3G27570	Predicted synthetic growth defect	FSW = 0.0156	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S THIOREDOXIN FOLD (INTERPROIPR012335) SUCRASEFERREDOXIN-LIKE (INTERPROIPR009737) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G405101) HAS 291 BLAST HITS TO 291 PROTEINS IN 98 SPECIES ARCHAE - 6 BACTERIA - 47 METAZOA - 0 FUNGI - 168 PLANTS - 40 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK)
AT3G51880	Predicted Affinity Capture-MS	FSW = 0.0302	Unknown	HMGB1 (HIGH MOBILITY GROUP B 1) DNA BINDING / CHROMATIN BINDING / STRUCTURAL CONSTITUENT OF CHROMATIN / TRANSCRIPTION FACTOR
AT3G52390	Predicted Affinity Capture-MS	FSW = 0.0111	Unknown	TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT3G58830	Predicted synthetic growth defect	FSW = 0.0163	Unknown	HALOACID DEHALOGENASE (HAD) SUPERFAMILY PROTEIN
AT3G59540	Predicted synthetic growth defect	FSW = 0.1331	Unknown	60S RIBOSOMAL PROTEIN L38 (RPL38B)
AT4G04700	Predicted Affinity Capture-Western Reconstituted Complex	FSW = 0.0311	Unknown	CPK27 ATP BINDING / CALCIUM ION BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G12620	Predicted synthetic growth defect	FSW = 0.0572	Unknown	ORC1B (ORIGIN OF REPLICATION COMPLEX 1B) DNA BINDING / DOUBLE-STRANDED METHYLATED DNA BINDING / PROTEIN BINDING
AT4G20280	Predicted Synthetic Rescue	FSW = 0.0216	Unknown	TAF11 (TBP-ASSOCIATED FACTOR 11) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION INITIATION FACTOR
AT4G25540	Predicted synthetic growth defect	FSW = 0.0229	Unknown	MSH3 (ARABIDOPSIS HOMOLOG OF DNA MISMATCH REPAIR PROTEIN MSH3) DAMAGED DNA BINDING / MISMATCHED DNA BINDING / PROTEIN BINDING
AT4G36050	Predicted synthetic growth defect	FSW = 0.1225	Unknown	ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN
AT5G01320	Predicted synthetic growth defect	FSW = 0.0338	Unknown	PYRUVATE DECARBOXYLASE PUTATIVE
AT5G01640	Predicted Affinity Capture-MS	FSW = 0.0890	Unknown	PRA1B5 (PRENYLATED RAB ACCEPTOR 1B5)
AT5G04800	Predicted synthetic growth defect	FSW = 0.1371	Unknown	40S RIBOSOMAL PROTEIN S17 (RPS17D)
AT5G06420	Predicted Affinity Capture-MS	FSW = 0.0311	Unknown	ZINC FINGER (CCCH-TYPE/C3HC4-TYPE RING FINGER) FAMILY PROTEIN
AT5G10930	Predicted synthetic growth defect	FSW = 0.1062	Unknown	CIPK5 (CBL-INTERACTING PROTEIN KINASE 5) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G13010	Predicted Affinity Capture-MS	FSW = 0.0605	Unknown	EMB3011 (EMBRYO DEFECTIVE 3011) ATP BINDING / RNA HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT5G14060	Predicted synthetic growth defect	FSW = 0.2138	Unknown	CARAB-AK-LYS AMINO ACID BINDING / ASPARTATE KINASE
AT5G17000	Predicted Affinity Capture-MS	FSW = 0.0286	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G17440	Predicted synthetic growth defect	FSW = 0.0623	Unknown	LUC7 N_TERMINUS DOMAIN-CONTAINING PROTEIN
AT5G25030	Predicted Affinity Capture-MS	FSW = 0.1052	Unknown	ATP BINDING / NUCLEOTIDE BINDING / PHENYLALANINE-TRNA LIGASE
AT5G39400	Predicted synthetic growth defect	FSW = 0.0203	Unknown	PTEN1 PHOSPHATASE
AT5G41700	Predicted synthetic growth defect	FSW = 0.0716	Unknown	UBC8 (UBIQUITIN CONJUGATING ENZYME 8) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G44830	Predicted synthetic growth defect	FSW = 0.2414	Unknown	GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN
AT5G53010	Predicted synthetic growth defect	FSW = 0.0269	Unknown	CALCIUM-TRANSPORTING ATPASE PUTATIVE

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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AT1G74710 - ( isochorismate synthase 1 (ICS1) / isochorismate mutase )

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