Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G75290 - ( oxidoreductase acting on NADH or NADPH )
24 Proteins interacs with AT1G75290Locus | Method | FSW | Cellular Compartment Classification (C3) | Description |
---|---|---|---|---|
AT5G09590 | PredictedPhenotypic Enhancement | FSW = 0.0654
| Unknown | MTHSC70-2 (MITOCHONDRIAL HSP70 2) ATP BINDING |
AT3G26590 | Predictedbiochemical | FSW = 0.0080
| Unknown | MATE EFFLUX FAMILY PROTEIN |
AT1G55920 | PredictedPhenotypic Enhancement | FSW = 0.0219
| Unknown | ATSERAT21 (SERINE ACETYLTRANSFERASE 21) SERINE O-ACETYLTRANSFERASE |
AT5G06290 | Predictedbiochemical | FSW = 0.0135
| Unknown | 2-CYS PRX B (2-CYSTEINE PEROXIREDOXIN B) ANTIOXIDANT/ PEROXIREDOXIN |
AT1G56050 | PredictedPhenotypic Enhancement | FSW = 0.0988
| Unknown | GTP-BINDING PROTEIN-RELATED |
AT5G15450 | PredictedPhenotypic Enhancement | FSW = 0.0607
| Unknown | CLPB3 (CASEIN LYTIC PROTEINASE B3) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING / PROTEIN BINDING |
AT5G48880 | PredictedSynthetic Lethality | FSW = 0.0191
| Unknown | PKT2 (PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2) ACETYL-COA C-ACYLTRANSFERASE/ CATALYTIC |
AT3G04460 | Predictedsynthetic growth defect | FSW = 0.0347
| Unknown | PEX12 PROTEIN BINDING / ZINC ION BINDING |
AT5G24090 | PredictedSynthetic Lethality | FSW = 0.0828
| Unknown | ACIDIC ENDOCHITINASE (CHIB1) |
AT2G05170 | PredictedPhenotypic Enhancement | FSW = 0.0746
| Unknown | ATVPS11 BINDING / PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING |
AT1G52300 | PredictedPhenotypic Enhancement | FSW = 0.0505
| Unknown | 60S RIBOSOMAL PROTEIN L37 (RPL37B) |
AT1G08940 | PredictedSynthetic Rescue | FSW = 0.0714
| Unknown | PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE FAMILY PROTEIN |
AT1G19750 | PredictedPhenotypic Enhancement | FSW = 0.0794
| Unknown | TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN |
AT1G34580 | PredictedReconstituted ComplexSynthetic Rescueinterologs mapping | FSW = 0.0134
| Unknown | MONOSACCHARIDE TRANSPORTER PUTATIVE |
AT1G52500 | PredictedPhenotypic Suppression | FSW = 0.0847
| Unknown | ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) DNA N-GLYCOSYLASE |
AT3G62760 | PredictedSynthetic Lethalityinterologs mappingReconstituted Complexinterologs mappingSynthetic Lethality | FSW = 0.0433
| Unknown | ATGSTF13 GLUTATHIONE TRANSFERASE |
AT2G31260 | PredictedPhenotypic Enhancement | FSW = 0.0499
| Unknown | APG9 (AUTOPHAGY 9) |
AT3G18850 | PredictedPhenotypic Enhancement | FSW = 0.0265
| Unknown | LPAT5 ACYLTRANSFERASE |
AT4G13020 | PredictedPhenotypic Enhancement | FSW = 0.0513
| Unknown | MHK ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE |
AT5G45620 | PredictedPhenotypic Enhancement | FSW = 0.0524
| Unknown | 26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9) |
AT4G39230 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.3030
| Unknown | ISOFLAVONE REDUCTASE PUTATIVE |
AT1G75300 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.3333
| Unknown | ISOFLAVONE REDUCTASE PUTATIVE |
AT4G34540 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.0565
| Unknown | ISOFLAVONE REDUCTASE FAMILY PROTEIN |
AT1G19540 | PredictedPhylogenetic profile methodCo-expression | FSW = 0.1545
| Unknown | ISOFLAVONE REDUCTASE PUTATIVE |
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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from
FSW
FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in commonLearn more - FSWeight top ranked cut offs
C3
Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described
PEP
PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029Learn more
How to cite
If you find AtPIN interesting and want to use it in your work please cite usAtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454DOI:1471-2105/10/454