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AT3G55810 - ( pyruvate kinase putative )

49 Proteins interacs with AT3G55810

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G36530	Predicted Affinity Capture-MS	FSW = 0.0913	Class C: plasma membrane cytosol	LOS2 COPPER ION BINDING / PHOSPHOPYRUVATE HYDRATASE
AT1G76040	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1194	Class C: plasma membrane cytosol	CPK29 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G25960	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method	FSW = 0.4127	Class C: plasma membrane cytosol	PYRUVATE KINASE PUTATIVE
AT3G04050	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method	FSW = 0.2112	Class C: plasma membrane cytosol	PYRUVATE KINASE PUTATIVE
AT4G26390	Predicted Enriched domain pair Phylogenetic profile method	FSW = 0.3577	Class C: plasma membrane cytosol	PYRUVATE KINASE PUTATIVE
AT5G56350	Predicted Enriched domain pair Phylogenetic profile method	FSW = 0.2188	Class C: plasma membrane cytosol	PYRUVATE KINASE PUTATIVE
AT3G52990	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method	FSW = 0.3832	Class C: plasma membrane cytosol	PYRUVATE KINASE PUTATIVE
AT3G55650	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method	FSW = 0.4127	Class C: plasma membrane cytosol	PYRUVATE KINASE PUTATIVE
AT5G63680	Predicted Enriched domain pair Phylogenetic profile method	FSW = 0.1533	Class C: plasma membrane cytosol	PYRUVATE KINASE PUTATIVE
AT2G36580	Predicted Enriched domain pair Phylogenetic profile method	FSW = 0.3974	Class C: plasma membrane cytosol	PYRUVATE KINASE PUTATIVE
AT5G08570	Predicted Enriched domain pair Phylogenetic profile method	FSW = 0.2190	Class C: plasma membrane cytosol	PYRUVATE KINASE PUTATIVE
AT1G22780	Predicted Affinity Capture-MS	FSW = 0.0708	Class C: plasma membrane	PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G45420	Predicted Affinity Capture-MS	FSW = 0.0678	Class C: plasma membrane	MYB FAMILY TRANSCRIPTION FACTOR
AT2G44690	Predicted Affinity Capture-MS	FSW = 0.0189	Class C: plasma membrane	ARAC9 GTP BINDING
AT1G22300	Predicted Affinity Capture-MS	FSW = 0.0313	Class C: plasma membrane	GRF10 (GENERAL REGULATORY FACTOR 10) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT4G36860	Predicted Affinity Capture-MS	FSW = 0.0787	Class C: plasma membrane	ZINC ION BINDING
AT3G11730	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0306	Class C: plasma membrane	ATFP8 GTP BINDING / GTP-DEPENDENT PROTEIN BINDING / MYOSIN XI TAIL BINDING
AT4G33650	Predicted Affinity Capture-MS	FSW = 0.0067	Class C: cytosol	DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING
AT3G08950	Predicted Affinity Capture-MS	FSW = 0.0572	Unknown	ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT3G22960	Predicted Enriched domain pair Gene neighbors method Phylogenetic profile method	FSW = 0.3974	Unknown	PKP-ALPHA PYRUVATE KINASE
AT5G52920	Predicted Enriched domain pair Phylogenetic profile method	FSW = 0.4127	Unknown	PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1) PYRUVATE KINASE
AT1G32440	Predicted Enriched domain pair Phylogenetic profile method	FSW = 0.4127	Unknown	PKP3 (PLASTIDIAL PYRUVATE KINASE 3) PYRUVATE KINASE
AT1G79020	Predicted Affinity Capture-MS	FSW = 0.0169	Unknown	TRANSCRIPTION FACTOR-RELATED
AT3G21540	Predicted Affinity Capture-MS	FSW = 0.0106	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT4G34430	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0855	Unknown	CHB3 DNA BINDING / TRANSCRIPTION FACTOR/ ZINC ION BINDING
AT5G27720	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0688	Unknown	EMB1644 (EMBRYO DEFECTIVE 1644)
AT2G13570	Predicted Affinity Capture-MS	FSW = 0.0220	Unknown	NF-YB7 (NUCLEAR FACTOR Y SUBUNIT B7) TRANSCRIPTION FACTOR
AT2G37470	Predicted Affinity Capture-MS	FSW = 0.0493	Unknown	HISTONE H2B PUTATIVE
AT3G61530	Predicted Affinity Capture-MS	FSW = 0.0340	Unknown	PANB2 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE
AT5G47630	Predicted Affinity Capture-MS	FSW = 0.0240	Unknown	MTACP3 (MITOCHONDRIAL ACYL CARRIER PROTEIN 3) ACYL CARRIER/ COFACTOR BINDING
AT1G72480	Predicted Affinity Capture-MS	FSW = 0.0405	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN GOLGI APPARATUS EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TRANSMEMBRANE RECEPTOR EUKARYOTA (INTERPROIPR009637) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G010701) HAS 422 BLAST HITS TO 420 PROTEINS IN 121 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 208 FUNGI - 101 PLANTS - 83 VIRUSES - 0 OTHER EUKARYOTES - 30 (SOURCE NCBI BLINK)
AT1G15960	Predicted Affinity Capture-MS	FSW = 0.0551	Unknown	NRAMP6 INORGANIC ANION TRANSMEMBRANE TRANSPORTER/ METAL ION TRANSMEMBRANE TRANSPORTER
AT1G02100	Predicted Affinity Capture-MS	FSW = 0.0450	Unknown	LEUCINE CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN
AT1G25260	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0617	Unknown	ACIDIC RIBOSOMAL PROTEIN P0-RELATED
AT1G26140	Predicted Affinity Capture-MS	FSW = 0.1531	Unknown	UNKNOWN PROTEIN
AT1G51770	Predicted Affinity Capture-MS	FSW = 0.0595	Unknown	UNKNOWN PROTEIN
AT2G22040	Predicted Affinity Capture-MS	FSW = 0.0712	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G33560	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0247	Unknown	SPINDLE CHECKPOINT PROTEIN-RELATED
AT2G44820	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0535	Unknown	UNKNOWN PROTEIN
AT3G18660	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0843	Unknown	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G15440	Predicted Affinity Capture-MS two hybrid	FSW = 0.0201	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G28720	Predicted Affinity Capture-MS	FSW = 0.0263	Unknown	HISTONE H2B PUTATIVE
AT2G31020	Predicted Affinity Capture-MS	FSW = 0.0830	Unknown	ORP1A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1A) OXYSTEROL BINDING
AT5G57630	Predicted two hybrid Synthetic Lethality	FSW = 0.0189	Unknown	CIPK21 (CBL-INTERACTING PROTEIN KINASE 21) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G01640	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.1168	Unknown	PRA1B5 (PRENYLATED RAB ACCEPTOR 1B5)
AT5G13010	Predicted Affinity Capture-MS	FSW = 0.1087	Unknown	EMB3011 (EMBRYO DEFECTIVE 3011) ATP BINDING / RNA HELICASE/ HELICASE/ NUCLEIC ACID BINDING
AT5G25520	Predicted Affinity Capture-MS	FSW = 0.0494	Unknown	TRANSCRIPTION ELONGATION FACTOR-RELATED
AT5G37830	Predicted Affinity Capture-MS	FSW = 0.1450	Unknown	OXP1 (OXOPROLINASE 1) 5-OXOPROLINASE (ATP-HYDROLYZING)/ HYDROLASE
AT5G41190	Predicted Affinity Capture-MS	FSW = 0.0522	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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AT3G55810 - ( pyruvate kinase putative )

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Fasta sequences:

Quick help

FSW

C3

PEP

How to cite