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AT1G50310 - ( STP9 (SUGAR TRANSPORTER 9) carbohydrate transmembrane transporter/ sugarhydrogen symporter )

78 Proteins interacs with AT1G50310

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT2G20450	Predicted Affinity Capture-MS	FSW = 0.3546	Class C: plasma membrane	60S RIBOSOMAL PROTEIN L14 (RPL14A)
AT3G56190	Predicted Affinity Capture-MS	FSW = 0.2964	Class C: plasma membrane	ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN
AT1G11260	Predicted Phylogenetic profile method Co-expression	FSW = 0.1154	Class C: plasma membrane	STP1 (SUGAR TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT1G22780	Predicted Affinity Capture-MS	FSW = 0.3552	Class C: plasma membrane	PFL (POINTED FIRST LEAVES) RNA BINDING / NUCLEIC ACID BINDING / STRUCTURAL CONSTITUENT OF RIBOSOME
AT1G15210	Predicted Affinity Capture-MS	FSW = 0.3906	Class C: plasma membrane	PDR7 (PLEIOTROPIC DRUG RESISTANCE 7) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT5G60390	Predicted Affinity Capture-MS	FSW = 0.2481	Class C: plasma membrane	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT5G43370	Predicted Affinity Capture-MS	FSW = 0.3665	Class C: plasma membrane	APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ INORGANIC PHOSPHATE TRANSMEMBRANE TRANSPORTER/ PHOSPHATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G19930	Predicted Phylogenetic profile method Co-expression	FSW = 0.0422	Class C: plasma membrane	STP4 (SUGAR TRANSPORTER 4) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ MONOSACCHARIDE TRANSMEMBRANE TRANSPORTER/ SUCROSEHYDROGEN SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT3G18830	Predicted Phylogenetic profile method Co-expression	FSW = 0.0898	Class C: plasma membrane	ATPLT5 (POLYOL TRANSPORTER 5) D-RIBOSE TRANSMEMBRANE TRANSPORTER/ D-XYLOSE TRANSMEMBRANE TRANSPORTER/ CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ GALACTOSE TRANSMEMBRANE TRANSPORTER/ GLUCOSE TRANSMEMBRANE TRANSPORTER/ GLYCEROL TRANSMEMBRANE TRANSPORTER/ MANN
AT1G22300	Predicted Affinity Capture-MS	FSW = 0.1562	Class C: plasma membrane	GRF10 (GENERAL REGULATORY FACTOR 10) ATP BINDING / PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT3G56760	Predicted Affinity Capture-Western fluorescence acceptor donor pair fluorescence acceptor donor pair	FSW = 0.0616	Class C: plasma membrane	CALCIUM-DEPENDENT PROTEIN KINASE PUTATIVE / CDPK PUTATIVE
AT5G41060	Predicted synthetic growth defect synthetic growth defect	FSW = 0.0367	Class C: plasma membrane	ZINC FINGER (DHHC TYPE) FAMILY PROTEIN
AT5G26340	Predicted Phenotypic Suppression	FSW = 0.0177	Class C: plasma membrane	MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT5G23270	Predicted Phylogenetic profile method Co-expression	FSW = 0.1312	Class C: plasma membrane	STP11 (SUGAR TRANSPORTER 11) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT4G36860	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.3301	Class C: plasma membrane	ZINC ION BINDING
AT4G32470	Predicted Affinity Capture-MS	FSW = 0.3926	Unknown	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KDA PROTEIN PUTATIVE
AT1G07930	Predicted Affinity Capture-MS	FSW = 0.3981	Unknown	ELONGATION FACTOR 1-ALPHA / EF-1-ALPHA
AT1G13040	Predicted Gene fusion method	FSW = 0.0132	Unknown	PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN
AT3G03090	Predicted Phylogenetic profile method Co-expression	FSW = 0.1023	Unknown	ATVGT1 (ARABIDOPSIS THALIANA VACUOLAR GLUCOSE TRANSPORTER 1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ FRUCTOSE TRANSMEMBRANE TRANSPORTER/ GLUCOSE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT3G62870	Predicted synthetic growth defect	FSW = 0.0359	Unknown	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT1G14320	Predicted Synthetic Rescue	FSW = 0.0036	Unknown	SAC52 (SUPPRESSOR OF ACAULIS 52) STRUCTURAL CONSTITUENT OF RIBOSOME
AT5G20020	Predicted Affinity Capture-MS	FSW = 0.0239	Unknown	RAN2 GTP BINDING / GTPASE/ PROTEIN BINDING
AT2G19860	Predicted Affinity Capture-MS	FSW = 0.2897	Unknown	HXK2 (HEXOKINASE 2) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT3G08950	Predicted Affinity Capture-MS	FSW = 0.3382	Unknown	ELECTRON TRANSPORT SCO1/SENC FAMILY PROTEIN
AT3G19980	Predicted Affinity Capture-MS	FSW = 0.2472	Unknown	ATFYPP3 (FLOWER-SPECIFIC PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3) PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT3G16950	Predicted Affinity Capture-MS	FSW = 0.2896	Unknown	LPD1 (LIPOAMIDE DEHYDROGENASE 1) DIHYDROLIPOYL DEHYDROGENASE
AT5G59250	Predicted Phylogenetic profile method Co-expression	FSW = 0.0877	Unknown	SUGAR TRANSPORTER FAMILY PROTEIN
AT5G13050	Predicted Affinity Capture-MS	FSW = 0.3757	Unknown	5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE
AT1G56410	Predicted synthetic growth defect synthetic growth defect	FSW = 0.0428	Unknown	ERD2 (EARLY-RESPONSIVE TO DEHYDRATION 2) ATP BINDING
AT1G21700	Predicted Synthetic Lethality	FSW = 0.0015	Unknown	ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) DNA BINDING
AT4G31720	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0173	Unknown	TAFII15 (TBP-ASSOCIATED FACTOR II 15) RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION FACTOR
AT2G37470	Predicted Affinity Capture-MS	FSW = 0.2424	Unknown	HISTONE H2B PUTATIVE
AT2G18700	Predicted Phenotypic Enhancement	FSW = 0.0231	Unknown	ATTPS11 TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT2G13650	Predicted Affinity Capture-MS	FSW = 0.3609	Unknown	GONST1 (GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1) GDP-MANNOSE TRANSMEMBRANE TRANSPORTER/ NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
AT5G57625	Predicted Affinity Capture-MS	FSW = 0.1240	Unknown	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT3G54840	Predicted Phenotypic Enhancement	FSW = 0.0097	Unknown	ARA6 GTP BINDING / GTPASE
AT3G16050	Predicted Affinity Capture-MS	FSW = 0.1865	Unknown	A37 PROTEIN HETERODIMERIZATION
AT3G52580	Predicted Affinity Capture-MS	FSW = 0.3348	Unknown	40S RIBOSOMAL PROTEIN S14 (RPS14C)
AT5G47880	Predicted Affinity Capture-MS	FSW = 0.4070	Unknown	ERF1-1 (EUKARYOTIC RELEASE FACTOR 1-1) TRANSLATION RELEASE FACTOR
AT4G17190	Predicted Affinity Capture-MS	FSW = 0.0215	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G07880	Predicted Phenotypic Suppression	FSW = 0.0033	Unknown	ATMPK13 MAP KINASE/ KINASE
AT1G23300	Predicted two hybrid	FSW = 0.0231	Unknown	MATE EFFLUX FAMILY PROTEIN
AT1G33110	Predicted Affinity Capture-MS	FSW = 0.4193	Unknown	MATE EFFLUX FAMILY PROTEIN
AT1G05650	Predicted Affinity Capture-MS	FSW = 0.2947	Unknown	POLYGALACTURONASE PUTATIVE / PECTINASE PUTATIVE
AT1G33090	Predicted Affinity Capture-MS	FSW = 0.0670	Unknown	MATE EFFLUX FAMILY PROTEIN
AT1G76720	Predicted Affinity Capture-MS	FSW = 0.4400	Unknown	GTP BINDING / GTPASE/ TRANSLATION INITIATION FACTOR
AT1G78290	Predicted Affinity Capture-MS	FSW = 0.0456	Unknown	SERINE/THREONINE PROTEIN KINASE PUTATIVE
AT2G27340	Predicted Affinity Capture-MS	FSW = 0.0386	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN CONTAINS INTERPRO DOMAIN/S N-ACETYLGLUCOSAMINYL PHOSPHATIDYLINOSITOL DEACETYLASE (INTERPROIPR003737) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED (TAIRAT3G581302) HAS 325 BLAST HITS TO 323 PROTEINS IN 156 SPECIES ARCHAE - 0 BACTERIA - 42 METAZOA - 92 FUNGI - 108 PLANTS - 28 VIRUSES - 0 OTHER EUKARYOTES - 55 (SOURCE NCBI BLINK)
AT2G32415	Predicted Affinity Capture-MS	FSW = 0.0119	Unknown	3-5 EXONUCLEASE/ NUCLEIC ACID BINDING
AT2G32960	Predicted Synthetic Lethality	FSW = 0.0251	Unknown	TYROSINE SPECIFIC PROTEIN PHOSPHATASE FAMILY PROTEIN
AT2G37760	Predicted Affinity Capture-MS	FSW = 0.0490	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT2G47570	Predicted Affinity Capture-MS	FSW = 0.1140	Unknown	60S RIBOSOMAL PROTEIN L18 (RPL18A)
AT3G09640	Predicted Affinity Capture-MS	FSW = 0.0153	Unknown	APX2 (ASCORBATE PEROXIDASE 2) L-ASCORBATE PEROXIDASE
AT3G12200	Predicted Affinity Capture-MS	FSW = 0.0354	Unknown	ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G12690	Predicted Affinity Capture-MS	FSW = 0.3468	Unknown	AGC15 (AGC KINASE 15) KINASE
AT3G18520	Predicted interologs mapping	FSW = 0.0080	Unknown	HDA15 HISTONE DEACETYLASE
AT3G52390	Predicted Affinity Capture-MS	FSW = 0.2710	Unknown	TATD-RELATED DEOXYRIBONUCLEASE FAMILY PROTEIN
AT4G27960	Predicted Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-Western fluorescence acceptor donor pair fluorescence acceptor donor pair	FSW = 0.0202	Unknown	UBC9 (UBIQUITIN CONJUGATING ENZYME 9) UBIQUITIN-PROTEIN LIGASE
AT5G09390	Predicted Affinity Capture-MS	FSW = 0.3417	Unknown	CD2-BINDING PROTEIN-RELATED
AT5G19150	Predicted Affinity Capture-MS	FSW = 0.1495	Unknown	CARBOHYDRATE KINASE FAMILY
AT5G52350	Predicted Affinity Capture-Western Affinity Capture-Western	FSW = 0.0459	Unknown	ATEXO70A3 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A3) PROTEIN BINDING
AT1G51770	Predicted Affinity Capture-MS	FSW = 0.3396	Unknown	UNKNOWN PROTEIN
AT1G62880	Predicted Affinity Capture-MS	FSW = 0.3364	Unknown	CORNICHON FAMILY PROTEIN
AT1G63660	Predicted interologs mapping	FSW = 0.0768	Unknown	GMP SYNTHASE (GLUTAMINE-HYDROLYZING) PUTATIVE / GLUTAMINE AMIDOTRANSFERASE PUTATIVE
AT2G20290	Predicted Affinity Capture-MS	FSW = 0.0052	Unknown	XIG MOTOR/ PROTEIN BINDING
AT2G46860	Predicted Affinity Capture-MS	FSW = 0.3703	Unknown	ATPPA3 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 3) INORGANIC DIPHOSPHATASE/ PYROPHOSPHATASE
AT3G30842	Predicted Affinity Capture-MS	FSW = 0.2545	Unknown	PDR10 (PLEIOTROPIC DRUG RESISTANCE 10) ATP BINDING / ATPASE/ NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT3G44590	Predicted Affinity Capture-Western Affinity Capture-MS fluorescence acceptor donor pair fluorescence acceptor donor pair	FSW = 0.0817	Unknown	60S ACIDIC RIBOSOMAL PROTEIN P2 (RPP2D)
AT4G17770	Predicted Affinity Capture-MS	FSW = 0.3853	Unknown	ATTPS5 PROTEIN BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TREHALOSE-PHOSPHATASE
AT4G21800	Predicted Affinity Capture-MS	FSW = 0.0689	Unknown	QQT2 (QUATRE-QUART2) ATP BINDING / NUCLEOTIDE BINDING
AT4G25850	Predicted Affinity Capture-Western	FSW = 0.0268	Unknown	ORP4B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4B) OXYSTEROL BINDING
AT4G25860	Predicted Affinity Capture-MS	FSW = 0.3024	Unknown	ORP4A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4A) OXYSTEROL BINDING
AT5G09630	Predicted Affinity Capture-MS	FSW = 0.3674	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT5G19820	Predicted Affinity Capture-MS	FSW = 0.2177	Unknown	EMB2734 (EMBRYO DEFECTIVE 2734) BINDING / LYASE
AT5G41190	Predicted Affinity Capture-MS	FSW = 0.2338	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 21 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S NIN ONE BINDING (NOB1) ZN-RIBBON LIKE (INTERPROIPR014881) D-SITE 20S PRE-RRNA NUCLEASE (INTERPROIPR017117) HAS 855 BLAST HITS TO 653 PROTEINS IN 196 SPECIES ARCHAE - 53 BACTERIA - 16 METAZOA - 335 FUNGI - 168 PLANTS - 29 VIRUSES - 10 OTHER EUKARYOTES - 244 (SOURCE NCBI BLINK)
AT3G19940	Predicted Phylogenetic profile method Co-expression	FSW = 0.3320	Unknown	SUGAR TRANSPORTER PUTATIVE
AT1G05030	Predicted Phylogenetic profile method Co-expression	FSW = 0.1096	Unknown	HEXOSE TRANSPORTER PUTATIVE
AT1G79820	Predicted Phylogenetic profile method Co-expression	FSW = 0.0783	Unknown	SGB1 (SUPPRESSOR OF G PROTEIN BETA1) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

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AT1G50310 - ( STP9 (SUGAR TRANSPORTER 9) carbohydrate transmembrane transporter/ sugarhydrogen symporter )

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