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AT2G17520 - ( IRE1A endoribonuclease/ kinase )

88 Proteins interacs with AT2G17520

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT5G66680	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.2624	Class C: nucleus endoplasmic reticulum	DGL1 DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE-PROTEIN GLYCOTRANSFERASE
AT3G11964	Predicted biochemical	FSW = 0.0016	Class C: nucleus	RNA BINDING
AT1G48130	Predicted biochemical	FSW = 0.0245	Class C: nucleus	ATPER1 ANTIOXIDANT/ THIOREDOXIN PEROXIDASE
AT3G50670	Predicted two hybrid	FSW = 0.0013	Class C: nucleus	U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K) RNA BINDING / NUCLEIC ACID BINDING / NUCLEOTIDE BINDING
AT3G54610	Predicted two hybrid Reconstituted Complex Affinity Capture-Western	FSW = 0.0098	Class C: nucleus	GCN5 DNA BINDING / H3 HISTONE ACETYLTRANSFERASE/ HISTONE ACETYLTRANSFERASE
AT2G30050	Predicted interologs mapping synthetic growth defect	FSW = 0.0677	Class C: nucleus	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT2G01720	Predicted Phenotypic Enhancement	FSW = 0.1657	Class C: endoplasmic reticulum	RIBOPHORIN I FAMILY PROTEIN
AT1G77510	Predicted Phenotypic Enhancement	FSW = 0.0776	Class C: endoplasmic reticulum	ATPDIL1-2 (PDI-LIKE 1-2) PROTEIN DISULFIDE ISOMERASE
AT5G60640	Predicted interologs mapping	FSW = 0.0475	Class C: endoplasmic reticulum	ATPDIL1-4 (PDI-LIKE 1-4) PROTEIN DISULFIDE ISOMERASE
AT2G01470	Predicted interologs mapping interologs mapping synthetic growth defect	FSW = 0.0842	Class C: endoplasmic reticulum	STL2P (SEC12P-LIKE 2 PROTEIN) NUCLEOTIDE BINDING
AT1G14010	Predicted interologs mapping	FSW = 0.0172	Class C: endoplasmic reticulum	EMP24/GP25L/P24 FAMILY PROTEIN
AT3G07180	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0299	Class C: endoplasmic reticulum	GPI TRANSAMIDASE COMPONENT PIG-S-RELATED
AT4G01320	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1006	Class C: endoplasmic reticulum	ATSTE24 ENDOPEPTIDASE/ METALLOENDOPEPTIDASE
AT3G07100	Predicted interologs mapping	FSW = 0.0376	Class C: endoplasmic reticulum	PROTEIN TRANSPORT PROTEIN SEC24 PUTATIVE
AT1G76490	Predicted two hybrid	FSW = 0.0704	Class C: endoplasmic reticulum	HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1) HYDROXYMETHYLGLUTARYL-COA REDUCTASE
AT5G63840	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1681	Class C: endoplasmic reticulum	RSW3 (RADIAL SWELLING 3) GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT1G79940	Predicted interologs mapping	FSW = 0.1224	Class C: endoplasmic reticulum	ATERDJ2A HEAT SHOCK PROTEIN BINDING / UNFOLDED PROTEIN BINDING
AT5G23630	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.2111	Class C: endoplasmic reticulum	ATPASE E1-E2 TYPE FAMILY PROTEIN / HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILIY PROTEIN
AT1G11890	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1299	Class C: endoplasmic reticulum	SEC22 TRANSPORTER
AT4G21180	Predicted Phenotypic Enhancement	FSW = 0.1010	Class C: endoplasmic reticulum	ATERDJ2B HEAT SHOCK PROTEIN BINDING / UNFOLDED PROTEIN BINDING
AT1G52600	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0299	Class C: endoplasmic reticulum	SIGNAL PEPTIDASE PUTATIVE
AT1G29330	Predicted Synthetic Lethality	FSW = 0.0252	Class C: endoplasmic reticulum	ERD2 (ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2) KDEL SEQUENCE BINDING / RECEPTOR
AT1G67490	Predicted synthetic growth defect	FSW = 0.1691	Class C: endoplasmic reticulum	GCS1 (GLUCOSIDASE 1) ALPHA-GLUCOSIDASE
AT2G39630	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1633	Class C: endoplasmic reticulum	GLYCOSYL TRANSFERASE FAMILY 2 PROTEIN
AT1G18260	Predicted interologs mapping	FSW = 0.1263	Class C: endoplasmic reticulum	SUPPRESSOR OF LIN-12-LIKE PROTEIN-RELATED / SEL-1 PROTEIN-RELATED
AT1G76400	Predicted interologs mapping	FSW = 0.1020	Class C: endoplasmic reticulum	RIBOPHORIN I FAMILY PROTEIN
AT1G51740	Predicted Phenotypic Enhancement	FSW = 0.0362	Class C: endoplasmic reticulum	SYP81 (SYNTAXIN OF PLANTS 81) SNAP RECEPTOR/ PROTEIN BINDING
AT1G01020	Predicted Phenotypic Enhancement	FSW = 0.0569	Class C: endoplasmic reticulum	ARV1
AT3G56190	Predicted synthetic growth defect	FSW = 0.0060	Unknown	ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN
AT5G13710	Predicted synthetic growth defect	FSW = 0.0656	Unknown	SMT1 (STEROL METHYLTRANSFERASE 1) STEROL 24-C-METHYLTRANSFERASE
AT4G34580	Predicted synthetic growth defect	FSW = 0.0098	Unknown	COW1 (CAN OF WORMS1) PHOSPHATIDYLINOSITOL TRANSPORTER/ TRANSPORTER
AT5G52640	Predicted synthetic growth defect	FSW = 0.0384	Unknown	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G19650	Predicted synthetic growth defect	FSW = 0.0110	Unknown	SEC14 CYTOSOLIC FACTOR PUTATIVE / PHOSPHOGLYCERIDE TRANSFER PROTEIN PUTATIVE
AT1G65040	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0891	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT1G56330	Predicted interologs mapping	FSW = 0.0880	Unknown	ATSAR1B (SECRETION-ASSOCIATED RAS 1 B) GTP BINDING
AT5G60790	Predicted biochemical	FSW = 0.0024	Unknown	ATGCN1 TRANSPORTER
AT1G71820	Predicted synthetic growth defect	FSW = 0.0044	Unknown	SEC6
AT5G26710	Predicted biochemical	FSW = 0.0080	Unknown	GLUTAMATE-TRNA LIGASE PUTATIVE / GLUTAMYL-TRNA SYNTHETASE PUTATUVE / GLURS PUTATIVE
AT5G38460	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1857	Unknown	ALG6 ALG8 GLYCOSYLTRANSFERASE FAMILY PROTEIN
AT2G44660	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1326	Unknown	TRANSFERASE TRANSFERRING GLYCOSYL GROUPS / TRANSFERASE TRANSFERRING HEXOSYL GROUPS
AT4G39220	Predicted Phenotypic Enhancement	FSW = 0.1092	Unknown	ATRER1A
AT4G16420	Predicted Reconstituted Complex	FSW = 0.0046	Unknown	ADA2B (HOMOLOG OF YEAST ADA2 2B) DNA BINDING / TRANSCRIPTION COACTIVATOR/ TRANSCRIPTION FACTOR
AT1G02145	Predicted Phenotypic Enhancement	FSW = 0.1503	Unknown	TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G07430	Predicted biochemical	FSW = 0.0202	Unknown	PROTEIN PHOSPHATASE 2C PUTATIVE / PP2C PUTATIVE
AT1G08750	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1318	Unknown	GPI-ANCHOR TRANSAMIDASE PUTATIVE
AT1G16560	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1625	Unknown	PER1-LIKE FAMILY PROTEIN
AT1G16900	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0972	Unknown	SUGAR BINDING / TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT1G17145	Predicted biochemical	FSW = 0.0135	Unknown	PROTEIN BINDING / ZINC ION BINDING
AT1G20575	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0787	Unknown	DOLICHYL-PHOSPHATE BETA-D-MANNOSYLTRANSFERASE PUTATIVE / DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE PUTATIVE / MANNOSE-P-DOLICHOL SYNTHASE PUTATIVE
AT1G49490	Predicted biochemical	FSW = 0.0070	Unknown	LEUCINE-RICH REPEAT FAMILY PROTEIN / EXTENSIN FAMILY PROTEIN
AT1G57600	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1514	Unknown	MEMBRANE BOUND O-ACYL TRANSFERASE (MBOAT) FAMILY PROTEIN
AT1G57620	Predicted Phenotypic Enhancement	FSW = 0.1434	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G69640	Predicted Phenotypic Suppression	FSW = 0.0827	Unknown	SBH1 (SPHINGOID BASE HYDROXYLASE 1) CATALYTIC/ SPHINGOSINE HYDROXYLASE
AT1G18830	Predicted interologs mapping	FSW = 0.0827	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G26690	Predicted Phenotypic Enhancement	FSW = 0.0224	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G60970	Predicted interologs mapping	FSW = 0.0380	Unknown	CLATHRIN ADAPTOR COMPLEX SMALL CHAIN FAMILY PROTEIN
AT1G79990	Predicted interologs mapping	FSW = 0.0975	Unknown	LOCATED IN ENDOMEMBRANE SYSTEM COPI VESICLE COAT GOLGI MEMBRANE EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SYS1 HOMOLOGUE (INTERPROIPR016973) HAS 55556 BLAST HITS TO 24059 PROTEINS IN 620 SPECIES ARCHAE - 38 BACTERIA - 5697 METAZOA - 25539 FUNGI - 10898 PLANTS - 5309 VIRUSES - 0 OTHER EUKARYOTES - 8075 (SOURCE NCBI BLINK)
AT3G01340	Predicted interologs mapping interologs mapping synthetic growth defect	FSW = 0.0695	Unknown	PROTEIN TRANSPORT PROTEIN SEC13 FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G12180	Predicted Phenotypic Enhancement	FSW = 0.1410	Unknown	CORNICHON FAMILY PROTEIN
AT3G55380	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.0768	Unknown	UBC14 (UBIQUITIN-CONJUGATING ENZYME 14) UBIQUITIN-PROTEIN LIGASE
AT4G14160	Predicted interologs mapping interologs mapping Phenotypic Enhancement	FSW = 0.1300	Unknown	TRANSPORT PROTEIN PUTATIVE
AT4G37760	Predicted Phenotypic Suppression	FSW = 0.0217	Unknown	SQE3 (SQUALENE EPOXIDASE 3) SQUALENE MONOOXYGENASE
AT5G50550	Predicted interologs mapping interologs mapping synthetic growth defect	FSW = 0.1021	Unknown	WD-40 REPEAT FAMILY PROTEIN / ST12P PROTEIN PUTATIVE
AT5G52210	Predicted interologs mapping Phenotypic Suppression	FSW = 0.0780	Unknown	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) GTP BINDING
AT5G63140	Predicted Synthetic Lethality Affinity Capture-Western biochemical	FSW = 0.0398	Unknown	ATPAP29 (ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 29) ACID PHOSPHATASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT2G22530	Predicted Phenotypic Enhancement	FSW = 0.2127	Unknown	CATALYTIC/ TRANSFERASE
AT2G29210	Predicted biochemical	FSW = 0.0186	Unknown	SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN
AT2G43650	Predicted biochemical	FSW = 0.0057	Unknown	EMB2777 (EMBRYO DEFECTIVE 2777)
AT2G47760	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0357	Unknown	ALG3 ALPHA-13-MANNOSYLTRANSFERASE/ CATALYTIC
AT3G02320	Predicted biochemical	FSW = 0.0109	Unknown	RNA BINDING / TRNA (GUANINE-N2-)-METHYLTRANSFERASE
AT3G09560	Predicted biochemical	FSW = 0.0070	Unknown	LIPIN FAMILY PROTEIN
AT3G23270	Predicted biochemical	FSW = 0.0170	Unknown	REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT3G62240	Predicted biochemical	FSW = 0.0114	Unknown	ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN
AT4G17890	Predicted biochemical	FSW = 0.0628	Unknown	AGD8 (ARF-GAP DOMAIN 8) ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING
AT5G27470	Predicted biochemical	FSW = 0.0119	Unknown	SERYL-TRNA SYNTHETASE / SERINE--TRNA LIGASE
AT5G42190	Predicted biochemical	FSW = 0.0037	Unknown	ASK2 (ARABIDOPSIS SKP1-LIKE 2) PROTEIN BINDING / UBIQUITIN-PROTEIN LIGASE
AT5G45140	Predicted biochemical	FSW = 0.0049	Unknown	NRPC2 DNA BINDING / DNA-DIRECTED RNA POLYMERASE/ RIBONUCLEOSIDE BINDING
AT1G09080	Predicted interologs mapping Affinity Capture-Western interologs mapping	FSW = 0.0985	Unknown	BIP3 ATP BINDING
AT3G44340	Predicted interologs mapping	FSW = 0.0972	Unknown	CEF (CLONE EIGHTY-FOUR) PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING
AT1G05520	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1210	Unknown	TRANSPORT PROTEIN PUTATIVE
AT5G02410	Predicted interologs mapping	FSW = 0.0807	Unknown	DIE2/ALG10 FAMILY
AT3G46460	Predicted interologs mapping Synthetic Lethality	FSW = 0.0898	Unknown	UBC13 (UBIQUITIN-CONJUGATING ENZYME 13) UBIQUITIN-PROTEIN LIGASE
AT2G18240	Predicted interologs mapping	FSW = 0.1154	Unknown	RER1 PROTEIN PUTATIVE
AT1G09580	Predicted interologs mapping	FSW = 0.1464	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT1G12340	Predicted interologs mapping	FSW = 0.0735	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN INTRACELLULAR SIGNALING CASCADE LOCATED IN MEMBRANE EXPRESSED IN MALE GAMETOPHYTE POLLEN TUBE EXPRESSED DURING L MATURE POLLEN STAGE M GERMINATED POLLEN STAGE CONTAINS INTERPRO DOMAIN/S CORNICHON (INTERPROIPR003377) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS CORNICHON FAMILY PROTEIN (TAIRAT1G123901) HAS 463 BLAST HITS TO 463 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 278 FUNGI - 110 PLANTS - 41 VIRUSES - 0 OTHER EUKARYOTES - 34 (SOURCE NCBI BLINK)
AT1G14290	Predicted interologs mapping	FSW = 0.0776	Unknown	SBH2 (SPHINGOID BASE HYDROXYLASE 2) CATALYTIC/ SPHINGOSINE HYDROXYLASE
AT1G58440	Predicted interologs mapping	FSW = 0.0328	Unknown	XF1 SQUALENE MONOOXYGENASE
AT3G07740	Predicted Reconstituted Complex	FSW = 0.0095	Unknown	ADA2A (HOMOLOG OF YEAST ADA2 2A) DNA BINDING / TRANSCRIPTION FACTOR

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT2G17520 - ( IRE1A endoribonuclease/ kinase )

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