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AT1G10210 - ( ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP kinase/ kinase )

137 Proteins interacs with AT1G10210

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT4G01370	Experimental two hybrid	FSW = 0.1069	Unknown	ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4) MAP KINASE/ KINASE
AT4G29810	Experimental two hybrid	FSW = 0.0325	Unknown	ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2) MAP KINASE KINASE/ KINASE
AT1G66410	Experimental protein array	FSW = 0.0023	Unknown	CAM4 (CALMODULIN 4) CALCIUM ION BINDING / SIGNAL TRANSDUCER
AT1G02680	Experimental protein array	FSW = 0.0055	Unknown	TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT5G40440	Experimental	FSW = 0.0280	Unknown	ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3) MAP KINASE KINASE
AT3G45640	Experimental two hybrid	FSW = 0.1846	Unknown	ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3) MAP KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE
AT2G43790	Experimental two hybrid Reconstituted Complex protein complementation assay	FSW = 0.0874	Unknown	ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6) MAP KINASE/ KINASE
AT5G67500	Predicted interologs mapping	FSW = 0.0374	Unknown	VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2) VOLTAGE-GATED ANION CHANNEL
AT3G16480	Predicted Affinity Capture-MS	FSW = 0.0478	Unknown	MPPALPHA (MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT) CATALYTIC/ METAL ION BINDING / METALLOENDOPEPTIDASE/ ZINC ION BINDING
AT5G63400	Predicted Synthetic Rescue	FSW = 0.0388	Unknown	ADK1 (ADENYLATE KINASE 1) ATP BINDING / ADENYLATE KINASE/ NUCLEOBASE NUCLEOSIDE NUCLEOTIDE KINASE/ NUCLEOTIDE KINASE/ PHOSPHOTRANSFERASE PHOSPHATE GROUP AS ACCEPTOR
AT3G09630	Predicted Phenotypic Suppression	FSW = 0.0311	Unknown	60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT2G33210	Predicted Affinity Capture-MS	FSW = 0.0014	Unknown	HSP60-2 (HEAT SHOCK PROTEIN 60-2) ATP BINDING
AT2G17360	Predicted Phenotypic Enhancement	FSW = 0.0859	Unknown	40S RIBOSOMAL PROTEIN S4 (RPS4A)
AT3G09440	Predicted biochemical	FSW = 0.0432	Unknown	HEAT SHOCK COGNATE 70 KDA PROTEIN 3 (HSC70-3) (HSP70-3)
AT3G08710	Predicted Affinity Capture-MS	FSW = 0.0202	Unknown	ATH9 (THIOREDOXIN H-TYPE 9)
AT1G44170	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.0071	Unknown	ALDH3H1 (ALDEHYDE DEHYDROGENASE 3H1) 3-CHLOROALLYL ALDEHYDE DEHYDROGENASE/ ALDEHYDE DEHYDROGENASE (NAD)
AT3G62870	Predicted synthetic growth defect	FSW = 0.0462	Unknown	60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT5G07090	Predicted Affinity Capture-MS Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western two hybrid	FSW = 0.1243	Unknown	40S RIBOSOMAL PROTEIN S4 (RPS4B)
AT3G22110	Predicted biochemical	FSW = 0.0114	Unknown	PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT4G28390	Predicted Affinity Capture-MS	FSW = 0.0206	Unknown	AAC3 (ADP/ATP CARRIER 3) ATPADP ANTIPORTER/ BINDING
AT5G26030	Predicted interologs mapping	FSW = 0.0262	Unknown	FC1 (FERROCHELATASE 1) FERROCHELATASE
AT1G74560	Predicted biochemical	FSW = 0.1289	Unknown	NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING
AT4G33650	Predicted Synthetic Lethality	FSW = 0.1488	Unknown	DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING
AT2G45130	Predicted biochemical	FSW = 0.0280	Unknown	SPX3 (SPX DOMAIN GENE 3)
AT5G16150	Predicted biochemical	FSW = 0.0143	Unknown	PGLCT (PLASTIDIC GLC TRANSLOCATOR) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G06290	Predicted Affinity Capture-MS two hybrid biochemical Reconstituted Complex	FSW = 0.0616	Unknown	2-CYS PRX B (2-CYSTEINE PEROXIREDOXIN B) ANTIOXIDANT/ PEROXIREDOXIN
AT2G45300	Predicted biochemical	FSW = 0.0188	Unknown	3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE / EPSP SYNTHASE
AT3G23940	Predicted Affinity Capture-Western	FSW = 0.0429	Unknown	DEHYDRATASE FAMILY
AT1G10070	Predicted Synthetic Lethality interologs mapping Affinity Capture-MS Synthetic Lethality Affinity Capture-MS Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS Affinity Capture-MS Affinity Capture-Western interologs mapping	FSW = 0.4467	Unknown	ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) BRANCHED-CHAIN-AMINO-ACID TRANSAMINASE/ CATALYTIC
AT4G30950	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0233	Unknown	FAD6 (FATTY ACID DESATURASE 6) OMEGA-6 FATTY ACID DESATURASE
AT1G15170	Predicted Affinity Capture-MS biochemical	FSW = 0.0676	Unknown	MATE EFFLUX FAMILY PROTEIN
AT4G34460	Predicted Phenotypic Enhancement Synthetic Rescue	FSW = 0.0169	Unknown	AGB1 (GTP BINDING PROTEIN BETA 1) GTPASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT3G23600	Predicted Affinity Capture-MS	FSW = 0.0501	Unknown	DIENELACTONE HYDROLASE FAMILY PROTEIN
AT3G45780	Predicted Affinity Capture-MS	FSW = 0.0175	Unknown	PHOT1 (PHOTOTROPIN 1) FMN BINDING / BLUE LIGHT PHOTORECEPTOR/ KINASE/ PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE
AT1G75170	Predicted Synthetic Rescue	FSW = 0.0208	Unknown	SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT1G20090	Predicted interologs mapping	FSW = 0.0433	Unknown	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) GTP BINDING
AT1G74050	Predicted biochemical	FSW = 0.0304	Unknown	60S RIBOSOMAL PROTEIN L6 (RPL6C)
AT1G06390	Predicted Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.1255	Unknown	GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1) GLYCOGEN SYNTHASE KINASE 3/ KINASE
AT5G26340	Predicted biochemical biochemical	FSW = 0.0379	Unknown	MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT3G25540	Predicted biochemical	FSW = 0.0323	Unknown	LAG1
AT2G47000	Predicted biochemical	FSW = 0.0322	Unknown	ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES / XENOBIOTIC-TRANSPORTING ATPASE
AT1G70490	Predicted biochemical	FSW = 0.0119	Unknown	ARFA1D GTP BINDING / PHOSPHOLIPASE ACTIVATOR/ PROTEIN BINDING
AT4G08800	Predicted biochemical	FSW = 0.0466	Unknown	PROTEIN KINASE PUTATIVE
AT4G18710	Predicted Phylogenetic profile method	FSW = 0.1662	Unknown	BIN2 (BRASSINOSTEROID-INSENSITIVE 2) GLYCOGEN SYNTHASE KINASE 3/ KINASE/ PROTEIN KINASE
AT3G53870	Predicted biochemical	FSW = 0.0351	Unknown	40S RIBOSOMAL PROTEIN S3 (RPS3B)
AT2G26300	Predicted Affinity Capture-Western Colocalization Phenotypic Suppression Reconstituted Complex Synthetic Rescue	FSW = 0.0123	Unknown	GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1) GTP BINDING / GTPASE/ CHANNEL REGULATOR/ SIGNAL TRANSDUCER
AT5G43900	Predicted interologs mapping interologs mapping interologs mapping synthetic growth defect	FSW = 0.0619	Unknown	MYA2 (ARABIDOPSIS MYOSIN 2) GTP-DEPENDENT PROTEIN BINDING / RAB GTPASE BINDING / MOTOR
AT1G18040	Predicted Phylogenetic profile method	FSW = 0.0406	Unknown	CDKD13 (CYCLIN-DEPENDENT KINASE D13) KINASE/ PROTEIN KINASE
AT2G40290	Predicted interologs mapping	FSW = 0.0725	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 PUTATIVE / EIF-2A PUTATIVE / EIF-2-ALPHA PUTATIVE
AT4G18880	Predicted two hybrid	FSW = 0.0027	Unknown	AT-HSFA4A DNA BINDING / TRANSCRIPTION FACTOR
AT5G47630	Predicted interologs mapping	FSW = 0.0393	Unknown	MTACP3 (MITOCHONDRIAL ACYL CARRIER PROTEIN 3) ACYL CARRIER/ COFACTOR BINDING
AT3G20970	Predicted biochemical	FSW = 0.0183	Unknown	NFU4 STRUCTURAL MOLECULE
AT4G26910	Predicted Phenotypic Enhancement	FSW = 0.0179	Unknown	2-OXOACID DEHYDROGENASE FAMILY PROTEIN
AT5G02730	Predicted Phenotypic Enhancement	FSW = 0.0331	Unknown	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT2G19980	Predicted Phenotypic Suppression	FSW = 0.0581	Unknown	ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT1G69460	Predicted biochemical	FSW = 0.0161	Unknown	EMP24/GP25L/P24 FAMILY PROTEIN
AT2G47990	Predicted biochemical	FSW = 0.0466	Unknown	SWA1 (SLOW WALKER1) NUCLEOTIDE BINDING
AT1G73190	Predicted biochemical	FSW = 0.0250	Unknown	TIP31 WATER CHANNEL
AT1G52300	Predicted Reconstituted Complex Reconstituted Complex Affinity Capture-MS	FSW = 0.0724	Unknown	60S RIBOSOMAL PROTEIN L37 (RPL37B)
AT4G39200	Predicted synthetic growth defect	FSW = 0.0935	Unknown	40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT3G57940	Predicted Affinity Capture-MS	FSW = 0.0075	Unknown	UNKNOWN PROTEIN
AT4G30800	Predicted biochemical	FSW = 0.0159	Unknown	40S RIBOSOMAL PROTEIN S11 (RPS11B)
AT3G44320	Predicted interologs mapping	FSW = 0.0155	Unknown	NIT3 (NITRILASE 3) INDOLE-3-ACETONITRILE NITRILASE/ INDOLE-3-ACETONITRILE NITRILE HYDRATASE/ NITRILASE
AT4G17190	Predicted Affinity Capture-MS	FSW = 0.0842	Unknown	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G06550	Predicted biochemical	FSW = 0.0596	Unknown	ENOYL-COA HYDRATASE/ISOMERASE FAMILY PROTEIN
AT1G08630	Predicted biochemical	FSW = 0.0116	Unknown	THA1 (THREONINE ALDOLASE 1) ALDEHYDE-LYASE/ THREONINE ALDOLASE
AT1G12390	Predicted interologs mapping biochemical	FSW = 0.0237	Unknown	CORNICHON FAMILY PROTEIN
AT1G35350	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1340	Unknown	LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G55060	Predicted Affinity Capture-Western Affinity Capture-Western Reconstituted Complex interologs mapping Affinity Capture-MS interologs mapping	FSW = 0.1635	Unknown	UBQ12 (UBIQUITIN 12) PROTEIN BINDING
AT1G60680	Predicted biochemical Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-MS interologs mapping biochemical	FSW = 0.1311	Unknown	ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G72340	Predicted Synthetic Lethality Phenotypic Enhancement Synthetic Lethality Reconstituted Complex two hybrid	FSW = 0.0403	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR 2B FAMILY PROTEIN / EIF-2B FAMILY PROTEIN
AT1G80530	Predicted interologs mapping	FSW = 0.0476	Unknown	NODULIN FAMILY PROTEIN
AT2G32160	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.0478	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S N2227-LIKE (INTERPROIPR012901) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G321701) HAS 325 BLAST HITS TO 315 PROTEINS IN 141 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 95 FUNGI - 130 PLANTS - 30 VIRUSES - 0 OTHER EUKARYOTES - 70 (SOURCE NCBI BLINK)
AT3G12200	Predicted Affinity Capture-MS Affinity Capture-MS	FSW = 0.0742	Unknown	ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G20870	Predicted Phenotypic Enhancement	FSW = 0.0074	Unknown	METAL TRANSPORTER FAMILY PROTEIN
AT3G22290	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement	FSW = 0.1643	Unknown	UNKNOWN PROTEIN
AT3G24010	Predicted interologs mapping	FSW = 0.0581	Unknown	ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT3G24495	Predicted Synthetic Lethality Synthetic Lethality Synthetic Lethality Affinity Capture-MS Phenotypic Enhancement	FSW = 0.0466	Unknown	MSH7 (MUTS HOMOLOG 7) ATP BINDING / DAMAGED DNA BINDING / MISMATCHED DNA BINDING
AT3G53030	Predicted interologs mapping	FSW = 0.0599	Unknown	SRPK4 (SER/ARG-RICH PROTEIN KINASE 4) KINASE/ PROTEIN KINASE
AT4G14000	Predicted Synthetic Lethality	FSW = 0.0565	Unknown	UNKNOWN PROTEIN
AT4G19880	Predicted Synthetic Lethality biochemical Phenotypic Enhancement	FSW = 0.0692	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RESPONSE TO CADMIUM ION LOCATED IN CHLOROPLAST EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S GLUTATHIONE S-TRANSFERASE PREDICTED (INTERPROIPR016639) GLUTATHIONE S-TRANSFERASE C-TERMINAL (INTERPROIPR004046) GLUTATHIONE S-TRANSFERASE C-TERMINAL-LIKE (INTERPROIPR010987) GLUTATHIONE S-TRANSFERASE/CHLORIDE CHANNEL C-TERMINAL (INTERPROIPR017933) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G450201) HAS 1635 BLAST HITS TO 1635 PROTEINS IN 489 SPECIES ARCHAE - 12 BACTERIA - 905 METAZOA - 23 FUNGI - 158 PLANTS - 57 VIRUSES - 0 OTHER EUKARYOTES - 480 (SOURCE NCBI BLINK)
AT4G21490	Predicted Synthetic Lethality synthetic growth defect Phenotypic Enhancement	FSW = 0.0995	Unknown	NDB3 NADH DEHYDROGENASE
AT4G25950	Predicted interologs mapping	FSW = 0.1261	Unknown	VATG3 (VACUOLAR ATP SYNTHASE G3) HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT4G27130	Predicted Synthetic Lethality synthetic growth defect	FSW = 0.1706	Unknown	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT5G06130	Predicted interologs mapping	FSW = 0.0162	Unknown	CHAPERONE PROTEIN DNAJ-RELATED
AT5G16980	Predicted synthetic growth defect Phenotypic Enhancement	FSW = 0.1175	Unknown	NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G66610	Predicted interologs mapping Synthetic Lethality	FSW = 0.0914	Unknown	DAR7 (DA1-RELATED PROTEIN 7) ZINC ION BINDING
AT1G16360	Predicted biochemical	FSW = 0.0323	Unknown	LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT1G22290	Predicted biochemical	FSW = 0.0370	Unknown	14-3-3 PROTEIN GF14 PUTATIVE (GRF10)
AT1G26140	Predicted Affinity Capture-MS	FSW = 0.0294	Unknown	UNKNOWN PROTEIN
AT1G27320	Predicted Phenotypic Enhancement	FSW = 0.0691	Unknown	AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) CYTOKININ RECEPTOR/ OSMOSENSOR/ PROTEIN HISTIDINE KINASE
AT1G44180	Predicted two hybrid	FSW = 0.0707	Unknown	AMINOACYLASE PUTATIVE / N-ACYL-L-AMINO-ACID AMIDOHYDROLASE PUTATIVE
AT1G61010	Predicted biochemical	FSW = 0.0056	Unknown	CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I) PROTEIN BINDING
AT1G66240	Predicted biochemical	FSW = 0.0450	Unknown	ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1) METAL ION BINDING
AT1G66590	Predicted biochemical	FSW = 0.1359	Unknown	COX19 FAMILY PROTEIN
AT1G69880	Predicted two hybrid	FSW = 0.0074	Unknown	ATH8 (THIOREDOXIN H-TYPE 8)
AT1G74810	Predicted biochemical	FSW = 0.0980	Unknown	BOR5 ANION EXCHANGER
AT1G76920	Predicted Phenotypic Enhancement	FSW = 0.0150	Unknown	F-BOX FAMILY PROTEIN (FBX3)
AT1G80500	Predicted biochemical	FSW = 0.0109	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN TRANSPORT ER TO GOLGI VESICLE-MEDIATED TRANSPORT LOCATED IN INTRACELLULAR EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SEDLIN (INTERPROIPR006722) LONGIN-LIKE (INTERPROIPR011012) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G209301) HAS 437 BLAST HITS TO 435 PROTEINS IN 138 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 248 FUNGI - 75 PLANTS - 53 VIRUSES - 0 OTHER EUKARYOTES - 61 (SOURCE NCBI BLINK)
AT1G80510	Predicted Affinity Capture-MS	FSW = 0.0772	Unknown	AMINO ACID TRANSPORTER FAMILY PROTEIN
AT2G24050	Predicted biochemical	FSW = 0.0180	Unknown	MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN
AT2G41340	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.0580	Unknown	RPB5D (RNA POLYMERASE II FIFTH LARGEST SUBUNIT D) DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT2G46070	Predicted Affinity Capture-Western Phylogenetic profile method Co-expression	FSW = 0.1601	Unknown	MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12) MAP KINASE/ KINASE
AT2G46280	Predicted Affinity Capture-MS	FSW = 0.0063	Unknown	TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1) NUCLEOTIDE BINDING / PROTEIN BINDING
AT3G10360	Predicted biochemical	FSW = 0.0381	Unknown	APUM4 (ARABIDOPSIS PUMILIO 4) RNA BINDING / BINDING
AT3G18660	Predicted Phenotypic Enhancement	FSW = 0.0964	Unknown	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G47610	Predicted biochemical	FSW = 0.0394	Unknown	TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT3G50960	Predicted biochemical	FSW = 0.0605	Unknown	PLP3A (PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG) BETA-TUBULIN BINDING
AT3G54510	Predicted biochemical	FSW = 0.0161	Unknown	EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT4G04695	Predicted Phenotypic Suppression	FSW = 0.0494	Unknown	CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G09310	Predicted biochemical	FSW = 0.0389	Unknown	SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN-CONTAINING PROTEIN
AT4G19003	Predicted Phenotypic Enhancement	FSW = 0.0064	Unknown	VPS25
AT4G19560	Predicted biochemical	FSW = 0.0374	Unknown	CYCT12 CYCLIN-DEPENDENT PROTEIN KINASE
AT4G20280	Predicted biochemical	FSW = 0.0725	Unknown	TAF11 (TBP-ASSOCIATED FACTOR 11) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION INITIATION FACTOR
AT4G23895	Predicted biochemical	FSW = 0.0200	Unknown	PLECKSTRIN HOMOLOGY (PH) DOMAIN-CONTAINING PROTEIN-RELATED
AT4G29580	Predicted Phenotypic Enhancement	FSW = 0.0613	Unknown	CYTIDINE DEAMINASE PUTATIVE / CYTIDINE AMINOHYDROLASE PUTATIVE
AT5G01670	Predicted biochemical	FSW = 0.0132	Unknown	ALDOSE REDUCTASE PUTATIVE
AT5G16040	Predicted Affinity Capture-MS	FSW = 0.0423	Unknown	REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT5G19510	Predicted Affinity Capture-MS	FSW = 0.0613	Unknown	ELONGATION FACTOR 1B ALPHA-SUBUNIT 2 (EEF1BALPHA2)
AT5G20340	Predicted biochemical	FSW = 0.0934	Unknown	BG5 (BETA-13-GLUCANASE 5) GLUCAN 13-BETA-GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G24510	Predicted Affinity Capture-MS	FSW = 0.0288	Unknown	60S ACIDIC RIBOSOMAL PROTEIN P1 PUTATIVE
AT5G45020	Predicted biochemical	FSW = 0.0269	Unknown	LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S GLUTATHIONE S-TRANSFERASE PREDICTED (INTERPROIPR016639) GLUTATHIONE S-TRANSFERASE C-TERMINAL (INTERPROIPR004046) GLUTATHIONE S-TRANSFERASE C-TERMINAL-LIKE (INTERPROIPR010987) GLUTATHIONE S-TRANSFERASE/CHLORIDE CHANNEL C-TERMINAL (INTERPROIPR017933) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT4G198801) HAS 1632 BLAST HITS TO 1632 PROTEINS IN 489 SPECIES ARCHAE - 12 BACTERIA - 907 METAZOA - 22 FUNGI - 156 PLANTS - 57 VIRUSES - 0 OTHER EUKARYOTES - 478 (SOURCE NCBI BLINK)
AT5G45620	Predicted Phenotypic Enhancement	FSW = 0.0806	Unknown	26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT5G64760	Predicted Affinity Capture-MS	FSW = 0.0660	Unknown	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)
AT1G07400	Predicted Affinity Capture-MS	FSW = 0.0050	Unknown	178 KDA CLASS I HEAT SHOCK PROTEIN (HSP178-CI)
AT1G04730	Predicted synthetic growth defect	FSW = 0.0046	Unknown	AAA-TYPE ATPASE FAMILY PROTEIN
AT5G20350	Predicted Synthetic Rescue Enriched domain pair Co-expression	FSW = 0.0196	Unknown	TIP1 (TIP GROWTH DEFECTIVE 1) S-ACYLTRANSFERASE/ ACYL BINDING
AT5G18570	Predicted two hybrid	FSW = 0.0158	Unknown	GTP1/OBG FAMILY PROTEIN
AT1G59580	Predicted Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.1357	Unknown	ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2) MAP KINASE/ KINASE/ PROTEIN KINASE
AT3G59790	Predicted Phylogenetic profile method Co-expression	FSW = 0.1613	Unknown	ATMPK10 MAP KINASE/ KINASE
AT4G36450	Predicted Phylogenetic profile method Co-expression	FSW = 0.2245	Unknown	ATMPK14 (MITOGEN-ACTIVATED PROTEIN KINASE 14) MAP KINASE/ KINASE
AT2G18170	Predicted Phylogenetic profile method Co-expression	FSW = 0.2090	Unknown	ATMPK7 (ARABIDOPSIS THALIANA MAP KINASE 7) MAP KINASE/ KINASE
AT1G07880	Predicted Gene neighbors method Phylogenetic profile method Co-expression	FSW = 0.1532	Unknown	ATMPK13 MAP KINASE/ KINASE
AT3G05840	Predicted Phylogenetic profile method	FSW = 0.1705	Unknown	ATSK12 PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G26751	Predicted Phylogenetic profile method	FSW = 0.1332	Unknown	ATSK11 PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT2G30980	Predicted Phylogenetic profile method	FSW = 0.1258	Unknown	ASKDZETA (ARABIDOPSIS SHAGGY-RELATED PROTEIN KINASE DZETA) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G14640	Predicted Phylogenetic profile method	FSW = 0.1544	Unknown	SK13 (SHAGGY-LIKE KINASE 13) ATP BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT1G10210 - ( ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP kinase/ kinase )

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