Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G10210 - ( ATMPK1 (MITOGEN-ACTIVATED PROTEIN KINASE 1) MAP kinase/ kinase )

137 Proteins interacs with AT1G10210
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT4G01370

Experimental

two hybrid

FSW = 0.1069

Unknown

ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4) MAP KINASE/ KINASE
AT4G29810

Experimental

two hybrid

FSW = 0.0325

Unknown

ATMKK2 (ARABIDOPSIS THALIANA MAP KINASE KINASE 2) MAP KINASE KINASE/ KINASE
AT1G66410

Experimental

protein array

FSW = 0.0023

Unknown

CAM4 (CALMODULIN 4) CALCIUM ION BINDING / SIGNAL TRANSDUCER
AT1G02680

Experimental

protein array

FSW = 0.0055

Unknown

TAF13 (TBP-ASSOCIATED FACTOR 13) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR
AT5G40440

Experimental

FSW = 0.0280

Unknown

ATMKK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3) MAP KINASE KINASE
AT3G45640

Experimental

two hybrid

FSW = 0.1846

Unknown

ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3) MAP KINASE/ KINASE/ PROTEIN BINDING / PROTEIN KINASE
AT2G43790

Experimental

two hybrid

Reconstituted Complex

protein complementation assay

FSW = 0.0874

Unknown

ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6) MAP KINASE/ KINASE
AT5G67500

Predicted

interologs mapping

FSW = 0.0374

Unknown

VDAC2 (VOLTAGE DEPENDENT ANION CHANNEL 2) VOLTAGE-GATED ANION CHANNEL
AT3G16480

Predicted

Affinity Capture-MS

FSW = 0.0478

Unknown

MPPALPHA (MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT) CATALYTIC/ METAL ION BINDING / METALLOENDOPEPTIDASE/ ZINC ION BINDING
AT5G63400

Predicted

Synthetic Rescue

FSW = 0.0388

Unknown

ADK1 (ADENYLATE KINASE 1) ATP BINDING / ADENYLATE KINASE/ NUCLEOBASE NUCLEOSIDE NUCLEOTIDE KINASE/ NUCLEOTIDE KINASE/ PHOSPHOTRANSFERASE PHOSPHATE GROUP AS ACCEPTOR
AT3G09630

Predicted

Phenotypic Suppression

FSW = 0.0311

Unknown

60S RIBOSOMAL PROTEIN L4/L1 (RPL4A)
AT2G33210

Predicted

Affinity Capture-MS

FSW = 0.0014

Unknown

HSP60-2 (HEAT SHOCK PROTEIN 60-2) ATP BINDING
AT2G17360

Predicted

Phenotypic Enhancement

FSW = 0.0859

Unknown

40S RIBOSOMAL PROTEIN S4 (RPS4A)
AT3G09440

Predicted

biochemical

FSW = 0.0432

Unknown

HEAT SHOCK COGNATE 70 KDA PROTEIN 3 (HSC70-3) (HSP70-3)
AT3G08710

Predicted

Affinity Capture-MS

FSW = 0.0202

Unknown

ATH9 (THIOREDOXIN H-TYPE 9)
AT1G44170

Predicted

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.0071

Unknown

ALDH3H1 (ALDEHYDE DEHYDROGENASE 3H1) 3-CHLOROALLYL ALDEHYDE DEHYDROGENASE/ ALDEHYDE DEHYDROGENASE (NAD)
AT3G62870

Predicted

synthetic growth defect

FSW = 0.0462

Unknown

60S RIBOSOMAL PROTEIN L7A (RPL7AB)
AT5G07090

Predicted

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

two hybrid

FSW = 0.1243

Unknown

40S RIBOSOMAL PROTEIN S4 (RPS4B)
AT3G22110

Predicted

biochemical

FSW = 0.0114

Unknown

PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT4G28390

Predicted

Affinity Capture-MS

FSW = 0.0206

Unknown

AAC3 (ADP/ATP CARRIER 3) ATPADP ANTIPORTER/ BINDING
AT5G26030

Predicted

interologs mapping

FSW = 0.0262

Unknown

FC1 (FERROCHELATASE 1) FERROCHELATASE
AT1G74560

Predicted

biochemical

FSW = 0.1289

Unknown

NRP1 (NAP1-RELATED PROTEIN 1) DNA BINDING / CHROMATIN BINDING / HISTONE BINDING
AT4G33650

Predicted

Synthetic Lethality

FSW = 0.1488

Unknown

DRP3A (DYNAMIN-RELATED PROTEIN 3A) GTP BINDING / GTPASE/ PHOSPHOINOSITIDE BINDING
AT2G45130

Predicted

biochemical

FSW = 0.0280

Unknown

SPX3 (SPX DOMAIN GENE 3)
AT5G16150

Predicted

biochemical

FSW = 0.0143

Unknown

PGLCT (PLASTIDIC GLC TRANSLOCATOR) CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ SUGARHYDROGEN SYMPORTER
AT5G06290

Predicted

Affinity Capture-MS

two hybrid

biochemical

Reconstituted Complex

FSW = 0.0616

Unknown

2-CYS PRX B (2-CYSTEINE PEROXIREDOXIN B) ANTIOXIDANT/ PEROXIREDOXIN
AT2G45300

Predicted

biochemical

FSW = 0.0188

Unknown

3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE / EPSP SYNTHASE
AT3G23940

Predicted

Affinity Capture-Western

FSW = 0.0429

Unknown

DEHYDRATASE FAMILY
AT1G10070

Predicted

Synthetic Lethality

interologs mapping

Affinity Capture-MS

Synthetic Lethality

Affinity Capture-MS

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-Western

interologs mapping

FSW = 0.4467

Unknown

ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) BRANCHED-CHAIN-AMINO-ACID TRANSAMINASE/ CATALYTIC
AT4G30950

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0233

Unknown

FAD6 (FATTY ACID DESATURASE 6) OMEGA-6 FATTY ACID DESATURASE
AT1G15170

Predicted

Affinity Capture-MS

biochemical

FSW = 0.0676

Unknown

MATE EFFLUX FAMILY PROTEIN
AT4G34460

Predicted

Phenotypic Enhancement

Synthetic Rescue

FSW = 0.0169

Unknown

AGB1 (GTP BINDING PROTEIN BETA 1) GTPASE/ NUCLEOTIDE BINDING / PROTEIN BINDING
AT3G23600

Predicted

Affinity Capture-MS

FSW = 0.0501

Unknown

DIENELACTONE HYDROLASE FAMILY PROTEIN
AT3G45780

Predicted

Affinity Capture-MS

FSW = 0.0175

Unknown

PHOT1 (PHOTOTROPIN 1) FMN BINDING / BLUE LIGHT PHOTORECEPTOR/ KINASE/ PROTEIN BINDING / PROTEIN SERINE/THREONINE KINASE
AT1G75170

Predicted

Synthetic Rescue

FSW = 0.0208

Unknown

SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN
AT1G20090

Predicted

interologs mapping

FSW = 0.0433

Unknown

ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) GTP BINDING
AT1G74050

Predicted

biochemical

FSW = 0.0304

Unknown

60S RIBOSOMAL PROTEIN L6 (RPL6C)
AT1G06390

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.1255

Unknown

GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1) GLYCOGEN SYNTHASE KINASE 3/ KINASE
AT5G26340

Predicted

biochemical

biochemical

FSW = 0.0379

Unknown

MSS1 CARBOHYDRATE TRANSMEMBRANE TRANSPORTER/ HEXOSEHYDROGEN SYMPORTER/ HIGH-AFFINITY HYDROGENGLUCOSE SYMPORTER/ SUGARHYDROGEN SYMPORTER
AT3G25540

Predicted

biochemical

FSW = 0.0323

Unknown

LAG1
AT2G47000

Predicted

biochemical

FSW = 0.0322

Unknown

ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4) ATPASE COUPLED TO TRANSMEMBRANE MOVEMENT OF SUBSTANCES / XENOBIOTIC-TRANSPORTING ATPASE
AT1G70490Predicted

biochemical

FSW = 0.0119

Unknown

ARFA1D GTP BINDING / PHOSPHOLIPASE ACTIVATOR/ PROTEIN BINDING
AT4G08800Predicted

biochemical

FSW = 0.0466

Unknown

PROTEIN KINASE PUTATIVE
AT4G18710

Predicted

Phylogenetic profile method

FSW = 0.1662

Unknown

BIN2 (BRASSINOSTEROID-INSENSITIVE 2) GLYCOGEN SYNTHASE KINASE 3/ KINASE/ PROTEIN KINASE
AT3G53870

Predicted

biochemical

FSW = 0.0351

Unknown

40S RIBOSOMAL PROTEIN S3 (RPS3B)
AT2G26300

Predicted

Affinity Capture-Western

Colocalization

Phenotypic Suppression

Reconstituted Complex

Synthetic Rescue

FSW = 0.0123

Unknown

GP ALPHA 1 (G PROTEIN ALPHA SUBUNIT 1) GTP BINDING / GTPASE/ CHANNEL REGULATOR/ SIGNAL TRANSDUCER
AT5G43900

Predicted

interologs mapping

interologs mapping

interologs mapping

synthetic growth defect

FSW = 0.0619

Unknown

MYA2 (ARABIDOPSIS MYOSIN 2) GTP-DEPENDENT PROTEIN BINDING / RAB GTPASE BINDING / MOTOR
AT1G18040

Predicted

Phylogenetic profile method

FSW = 0.0406

Unknown

CDKD13 (CYCLIN-DEPENDENT KINASE D13) KINASE/ PROTEIN KINASE
AT2G40290

Predicted

interologs mapping

FSW = 0.0725

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 PUTATIVE / EIF-2A PUTATIVE / EIF-2-ALPHA PUTATIVE
AT4G18880

Predicted

two hybrid

FSW = 0.0027

Unknown

AT-HSFA4A DNA BINDING / TRANSCRIPTION FACTOR
AT5G47630

Predicted

interologs mapping

FSW = 0.0393

Unknown

MTACP3 (MITOCHONDRIAL ACYL CARRIER PROTEIN 3) ACYL CARRIER/ COFACTOR BINDING
AT3G20970

Predicted

biochemical

FSW = 0.0183

Unknown

NFU4 STRUCTURAL MOLECULE
AT4G26910

Predicted

Phenotypic Enhancement

FSW = 0.0179

Unknown

2-OXOACID DEHYDROGENASE FAMILY PROTEIN
AT5G02730

Predicted

Phenotypic Enhancement

FSW = 0.0331

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT2G19980

Predicted

Phenotypic Suppression

FSW = 0.0581

Unknown

ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN
AT1G69460

Predicted

biochemical

FSW = 0.0161

Unknown

EMP24/GP25L/P24 FAMILY PROTEIN
AT2G47990

Predicted

biochemical

FSW = 0.0466

Unknown

SWA1 (SLOW WALKER1) NUCLEOTIDE BINDING
AT1G73190

Predicted

biochemical

FSW = 0.0250

Unknown

TIP31 WATER CHANNEL
AT1G52300

Predicted

Reconstituted Complex

Reconstituted Complex

Affinity Capture-MS

FSW = 0.0724

Unknown

60S RIBOSOMAL PROTEIN L37 (RPL37B)
AT4G39200

Predicted

synthetic growth defect

FSW = 0.0935

Unknown

40S RIBOSOMAL PROTEIN S25 (RPS25E)
AT3G57940

Predicted

Affinity Capture-MS

FSW = 0.0075

Unknown

UNKNOWN PROTEIN
AT4G30800

Predicted

biochemical

FSW = 0.0159

Unknown

40S RIBOSOMAL PROTEIN S11 (RPS11B)
AT3G44320

Predicted

interologs mapping

FSW = 0.0155

Unknown

NIT3 (NITRILASE 3) INDOLE-3-ACETONITRILE NITRILASE/ INDOLE-3-ACETONITRILE NITRILE HYDRATASE/ NITRILASE
AT4G17190

Predicted

Affinity Capture-MS

FSW = 0.0842

Unknown

FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) DIMETHYLALLYLTRANSTRANSFERASE/ GERANYLTRANSTRANSFERASE
AT1G06550

Predicted

biochemical

FSW = 0.0596

Unknown

ENOYL-COA HYDRATASE/ISOMERASE FAMILY PROTEIN
AT1G08630

Predicted

biochemical

FSW = 0.0116

Unknown

THA1 (THREONINE ALDOLASE 1) ALDEHYDE-LYASE/ THREONINE ALDOLASE
AT1G12390

Predicted

interologs mapping

biochemical

FSW = 0.0237

Unknown

CORNICHON FAMILY PROTEIN
AT1G35350

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1340

Unknown

LOCATED IN INTEGRAL TO MEMBRANE EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S EXS C-TERMINAL (INTERPROIPR004342) SPX N-TERMINAL (INTERPROIPR004331) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN (TAIRAT1G267301) HAS 734 BLAST HITS TO 697 PROTEINS IN 158 SPECIES ARCHAE - 0 BACTERIA - 21 METAZOA - 234 FUNGI - 245 PLANTS - 125 VIRUSES - 0 OTHER EUKARYOTES - 109 (SOURCE NCBI BLINK)
AT1G55060

Predicted

Affinity Capture-Western

Affinity Capture-Western

Reconstituted Complex

interologs mapping

Affinity Capture-MS

interologs mapping

FSW = 0.1635

Unknown

UBQ12 (UBIQUITIN 12) PROTEIN BINDING
AT1G60680

Predicted

biochemical

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-Western

Affinity Capture-MS

interologs mapping

biochemical

FSW = 0.1311

Unknown

ALDO/KETO REDUCTASE FAMILY PROTEIN
AT1G72340

Predicted

Synthetic Lethality

Phenotypic Enhancement

Synthetic Lethality

Reconstituted Complex

two hybrid

FSW = 0.0403

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR 2B FAMILY PROTEIN / EIF-2B FAMILY PROTEIN
AT1G80530

Predicted

interologs mapping

FSW = 0.0476

Unknown

NODULIN FAMILY PROTEIN
AT2G32160

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.0478

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 19 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S N2227-LIKE (INTERPROIPR012901) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G321701) HAS 325 BLAST HITS TO 315 PROTEINS IN 141 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 95 FUNGI - 130 PLANTS - 30 VIRUSES - 0 OTHER EUKARYOTES - 70 (SOURCE NCBI BLINK)
AT3G12200

Predicted

Affinity Capture-MS

Affinity Capture-MS

FSW = 0.0742

Unknown

ATNEK7 (NIMA-RELATED KINASE7) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT3G20870

Predicted

Phenotypic Enhancement

FSW = 0.0074

Unknown

METAL TRANSPORTER FAMILY PROTEIN
AT3G22290

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1643

Unknown

UNKNOWN PROTEIN
AT3G24010

Predicted

interologs mapping

FSW = 0.0581

Unknown

ING1 (INHIBITOR OF GROWTH 1) DNA BINDING / METHYLATED HISTONE RESIDUE BINDING
AT3G24495

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Affinity Capture-MS

Phenotypic Enhancement

FSW = 0.0466

Unknown

MSH7 (MUTS HOMOLOG 7) ATP BINDING / DAMAGED DNA BINDING / MISMATCHED DNA BINDING
AT3G53030

Predicted

interologs mapping

FSW = 0.0599

Unknown

SRPK4 (SER/ARG-RICH PROTEIN KINASE 4) KINASE/ PROTEIN KINASE
AT4G14000

Predicted

Synthetic Lethality

FSW = 0.0565

Unknown

UNKNOWN PROTEIN
AT4G19880

Predicted

Synthetic Lethality

biochemical

Phenotypic Enhancement

FSW = 0.0692

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN RESPONSE TO CADMIUM ION LOCATED IN CHLOROPLAST EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S GLUTATHIONE S-TRANSFERASE PREDICTED (INTERPROIPR016639) GLUTATHIONE S-TRANSFERASE C-TERMINAL (INTERPROIPR004046) GLUTATHIONE S-TRANSFERASE C-TERMINAL-LIKE (INTERPROIPR010987) GLUTATHIONE S-TRANSFERASE/CHLORIDE CHANNEL C-TERMINAL (INTERPROIPR017933) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G450201) HAS 1635 BLAST HITS TO 1635 PROTEINS IN 489 SPECIES ARCHAE - 12 BACTERIA - 905 METAZOA - 23 FUNGI - 158 PLANTS - 57 VIRUSES - 0 OTHER EUKARYOTES - 480 (SOURCE NCBI BLINK)
AT4G21490

Predicted

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.0995

Unknown

NDB3 NADH DEHYDROGENASE
AT4G25950

Predicted

interologs mapping

FSW = 0.1261

Unknown

VATG3 (VACUOLAR ATP SYNTHASE G3) HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES
AT4G27130

Predicted

Synthetic Lethality

synthetic growth defect

FSW = 0.1706

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 PUTATIVE
AT5G06130

Predicted

interologs mapping

FSW = 0.0162

Unknown

CHAPERONE PROTEIN DNAJ-RELATED
AT5G16980

Predicted

synthetic growth defect

Phenotypic Enhancement

FSW = 0.1175

Unknown

NADP-DEPENDENT OXIDOREDUCTASE PUTATIVE
AT5G66610

Predicted

interologs mapping

Synthetic Lethality

FSW = 0.0914

Unknown

DAR7 (DA1-RELATED PROTEIN 7) ZINC ION BINDING
AT1G16360

Predicted

biochemical

FSW = 0.0323

Unknown

LEM3 (LIGAND-EFFECT MODULATOR 3) FAMILY PROTEIN / CDC50 FAMILY PROTEIN
AT1G22290

Predicted

biochemical

FSW = 0.0370

Unknown

14-3-3 PROTEIN GF14 PUTATIVE (GRF10)
AT1G26140

Predicted

Affinity Capture-MS

FSW = 0.0294

Unknown

UNKNOWN PROTEIN
AT1G27320

Predicted

Phenotypic Enhancement

FSW = 0.0691

Unknown

AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) CYTOKININ RECEPTOR/ OSMOSENSOR/ PROTEIN HISTIDINE KINASE
AT1G44180

Predicted

two hybrid

FSW = 0.0707

Unknown

AMINOACYLASE PUTATIVE / N-ACYL-L-AMINO-ACID AMIDOHYDROLASE PUTATIVE
AT1G61010

Predicted

biochemical

FSW = 0.0056

Unknown

CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I) PROTEIN BINDING
AT1G66240

Predicted

biochemical

FSW = 0.0450

Unknown

ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1) METAL ION BINDING
AT1G66590

Predicted

biochemical

FSW = 0.1359

Unknown

COX19 FAMILY PROTEIN
AT1G69880

Predicted

two hybrid

FSW = 0.0074

Unknown

ATH8 (THIOREDOXIN H-TYPE 8)
AT1G74810

Predicted

biochemical

FSW = 0.0980

Unknown

BOR5 ANION EXCHANGER
AT1G76920

Predicted

Phenotypic Enhancement

FSW = 0.0150

Unknown

F-BOX FAMILY PROTEIN (FBX3)
AT1G80500

Predicted

biochemical

FSW = 0.0109

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN TRANSPORT ER TO GOLGI VESICLE-MEDIATED TRANSPORT LOCATED IN INTRACELLULAR EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SEDLIN (INTERPROIPR006722) LONGIN-LIKE (INTERPROIPR011012) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT2G209301) HAS 437 BLAST HITS TO 435 PROTEINS IN 138 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 248 FUNGI - 75 PLANTS - 53 VIRUSES - 0 OTHER EUKARYOTES - 61 (SOURCE NCBI BLINK)
AT1G80510

Predicted

Affinity Capture-MS

FSW = 0.0772

Unknown

AMINO ACID TRANSPORTER FAMILY PROTEIN
AT2G24050

Predicted

biochemical

FSW = 0.0180

Unknown

MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN
AT2G41340

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.0580

Unknown

RPB5D (RNA POLYMERASE II FIFTH LARGEST SUBUNIT D) DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT2G46070

Predicted

Affinity Capture-Western

Phylogenetic profile method

Co-expression

FSW = 0.1601

Unknown

MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12) MAP KINASE/ KINASE
AT2G46280

Predicted

Affinity Capture-MS

FSW = 0.0063

Unknown

TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1) NUCLEOTIDE BINDING / PROTEIN BINDING
AT3G10360

Predicted

biochemical

FSW = 0.0381

Unknown

APUM4 (ARABIDOPSIS PUMILIO 4) RNA BINDING / BINDING
AT3G18660

Predicted

Phenotypic Enhancement

FSW = 0.0964

Unknown

PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) TRANSFERASE TRANSFERRING GLYCOSYL GROUPS
AT3G47610

Predicted

biochemical

FSW = 0.0394

Unknown

TRANSCRIPTION REGULATOR/ ZINC ION BINDING
AT3G50960

Predicted

biochemical

FSW = 0.0605

Unknown

PLP3A (PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG) BETA-TUBULIN BINDING
AT3G54510

Predicted

biochemical

FSW = 0.0161

Unknown

EARLY-RESPONSIVE TO DEHYDRATION PROTEIN-RELATED / ERD PROTEIN-RELATED
AT4G04695

Predicted

Phenotypic Suppression

FSW = 0.0494

Unknown

CPK31 ATP BINDING / CALCIUM ION BINDING / CALMODULIN-DEPENDENT PROTEIN KINASE/ KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE/ PROTEIN TYROSINE KINASE
AT4G09310

Predicted

biochemical

FSW = 0.0389

Unknown

SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN-CONTAINING PROTEIN
AT4G19003

Predicted

Phenotypic Enhancement

FSW = 0.0064

Unknown

VPS25
AT4G19560

Predicted

biochemical

FSW = 0.0374

Unknown

CYCT12 CYCLIN-DEPENDENT PROTEIN KINASE
AT4G20280

Predicted

biochemical

FSW = 0.0725

Unknown

TAF11 (TBP-ASSOCIATED FACTOR 11) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION FACTOR/ TRANSCRIPTION INITIATION FACTOR
AT4G23895

Predicted

biochemical

FSW = 0.0200

Unknown

PLECKSTRIN HOMOLOGY (PH) DOMAIN-CONTAINING PROTEIN-RELATED
AT4G29580

Predicted

Phenotypic Enhancement

FSW = 0.0613

Unknown

CYTIDINE DEAMINASE PUTATIVE / CYTIDINE AMINOHYDROLASE PUTATIVE
AT5G01670

Predicted

biochemical

FSW = 0.0132

Unknown

ALDOSE REDUCTASE PUTATIVE
AT5G16040

Predicted

Affinity Capture-MS

FSW = 0.0423

Unknown

REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN
AT5G19510

Predicted

Affinity Capture-MS

FSW = 0.0613

Unknown

ELONGATION FACTOR 1B ALPHA-SUBUNIT 2 (EEF1BALPHA2)
AT5G20340

Predicted

biochemical

FSW = 0.0934

Unknown

BG5 (BETA-13-GLUCANASE 5) GLUCAN 13-BETA-GLUCOSIDASE/ HYDROLASE HYDROLYZING O-GLYCOSYL COMPOUNDS
AT5G24510

Predicted

Affinity Capture-MS

FSW = 0.0288

Unknown

60S ACIDIC RIBOSOMAL PROTEIN P1 PUTATIVE
AT5G45020

Predicted

biochemical

FSW = 0.0269

Unknown

LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 22 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S GLUTATHIONE S-TRANSFERASE PREDICTED (INTERPROIPR016639) GLUTATHIONE S-TRANSFERASE C-TERMINAL (INTERPROIPR004046) GLUTATHIONE S-TRANSFERASE C-TERMINAL-LIKE (INTERPROIPR010987) GLUTATHIONE S-TRANSFERASE/CHLORIDE CHANNEL C-TERMINAL (INTERPROIPR017933) THIOREDOXIN-LIKE FOLD (INTERPROIPR012336) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT4G198801) HAS 1632 BLAST HITS TO 1632 PROTEINS IN 489 SPECIES ARCHAE - 12 BACTERIA - 907 METAZOA - 22 FUNGI - 156 PLANTS - 57 VIRUSES - 0 OTHER EUKARYOTES - 478 (SOURCE NCBI BLINK)
AT5G45620

Predicted

Phenotypic Enhancement

FSW = 0.0806

Unknown

26S PROTEASOME REGULATORY SUBUNIT PUTATIVE (RPN9)
AT5G64760

Predicted

Affinity Capture-MS

FSW = 0.0660

Unknown

RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)
AT1G07400

Predicted

Affinity Capture-MS

FSW = 0.0050

Unknown

178 KDA CLASS I HEAT SHOCK PROTEIN (HSP178-CI)
AT1G04730Predicted

synthetic growth defect

FSW = 0.0046

Unknown

AAA-TYPE ATPASE FAMILY PROTEIN
AT5G20350

Predicted

Synthetic Rescue

Enriched domain pair

Co-expression

FSW = 0.0196

Unknown

TIP1 (TIP GROWTH DEFECTIVE 1) S-ACYLTRANSFERASE/ ACYL BINDING
AT5G18570

Predicted

two hybrid

FSW = 0.0158

Unknown

GTP1/OBG FAMILY PROTEIN
AT1G59580

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.1357

Unknown

ATMPK2 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2) MAP KINASE/ KINASE/ PROTEIN KINASE
AT3G59790

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.1613

Unknown

ATMPK10 MAP KINASE/ KINASE
AT4G36450

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.2245

Unknown

ATMPK14 (MITOGEN-ACTIVATED PROTEIN KINASE 14) MAP KINASE/ KINASE
AT2G18170

Predicted

Phylogenetic profile method

Co-expression

FSW = 0.2090

Unknown

ATMPK7 (ARABIDOPSIS THALIANA MAP KINASE 7) MAP KINASE/ KINASE
AT1G07880

Predicted

Gene neighbors method

Phylogenetic profile method

Co-expression

FSW = 0.1532

Unknown

ATMPK13 MAP KINASE/ KINASE
AT3G05840

Predicted

Phylogenetic profile method

FSW = 0.1705

Unknown

ATSK12 PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G26751

Predicted

Phylogenetic profile method

FSW = 0.1332

Unknown

ATSK11 PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT2G30980

Predicted

Phylogenetic profile method

FSW = 0.1258

Unknown

ASKDZETA (ARABIDOPSIS SHAGGY-RELATED PROTEIN KINASE DZETA) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT5G14640

Predicted

Phylogenetic profile method

FSW = 0.1544

Unknown

SK13 (SHAGGY-LIKE KINASE 13) ATP BINDING / PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE

Downloads

Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454