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AT1G11890 - ( SEC22 transporter )

132 Proteins interacs with AT1G11890

Locus	Method	FSW	Cellular Compartment Classification (C3)	Description
AT5G66680	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0543	Class C: plasma membrane endoplasmic reticulum	DGL1 DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE-PROTEIN GLYCOTRANSFERASE
AT1G02130	Predicted Synthetic Lethality Reconstituted Complex Phenotypic Suppression interologs mapping interologs mapping Synthetic Rescue interaction prediction	FSW = 0.0494	Class C: plasma membrane endoplasmic reticulum	ARA-5 (ARABIDOPSIS RAS 5) GTP BINDING
AT5G23630	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.2860	Class C: plasma membrane endoplasmic reticulum	ATPASE E1-E2 TYPE FAMILY PROTEIN / HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILIY PROTEIN
AT1G07670	Predicted Phenotypic Enhancement	FSW = 0.1140	Class C: plasma membrane endoplasmic reticulum	CALCIUM-TRANSPORTING ATPASE
AT3G08580	Predicted two hybrid	FSW = 0.0334	Class C: plasma membrane	AAC1 (ADP/ATP CARRIER 1) ATPADP ANTIPORTER/ BINDING
AT1G78900	Predicted Phenotypic Enhancement	FSW = 0.0256	Class C: plasma membrane	VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A) ATP BINDING / HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT3G56190	Predicted Reconstituted Complex Affinity Capture-Western Affinity Capture-Western interaction prediction	FSW = 0.0430	Class C: plasma membrane	ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2) BINDING / SOLUBLE NSF ATTACHMENT PROTEIN
AT3G12110	Predicted Phenotypic Enhancement	FSW = 0.0471	Class C: plasma membrane	ACT11 (ACTIN-11) STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT5G52640	Predicted Synthetic Lethality	FSW = 0.0491	Class C: plasma membrane	ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G62020	Predicted Affinity Capture-Western interaction prediction	FSW = 0.0764	Class C: plasma membrane	COATOMER PROTEIN COMPLEX SUBUNIT ALPHA PUTATIVE
AT1G56330	Predicted interaction prediction Affinity Capture-Western Affinity Capture-Western Co-purification interologs mapping	FSW = 0.0736	Class C: plasma membrane	ATSAR1B (SECRETION-ASSOCIATED RAS 1 B) GTP BINDING
AT3G07180	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0538	Class C: endoplasmic reticulum	GPI TRANSAMIDASE COMPONENT PIG-S-RELATED
AT4G01320	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0479	Class C: endoplasmic reticulum	ATSTE24 ENDOPEPTIDASE/ METALLOENDOPEPTIDASE
AT3G07100	Predicted Affinity Capture-Western fluorescence acceptor donor pair fluorescence acceptor donor pair interologs mapping interaction prediction	FSW = 0.0503	Class C: endoplasmic reticulum	PROTEIN TRANSPORT PROTEIN SEC24 PUTATIVE
AT2G17520	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1299	Class C: endoplasmic reticulum	IRE1A ENDORIBONUCLEASE/ KINASE
AT1G10130	Predicted interologs mapping	FSW = 0.0720	Class C: endoplasmic reticulum	ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3) CALCIUM-TRANSPORTING ATPASE/ CALMODULIN BINDING / MANGANESE-TRANSPORTING ATPASE/ PEROXIDASE
AT1G22200	Predicted Phenotypic Enhancement	FSW = 0.0691	Class C: endoplasmic reticulum	UNKNOWN PROTEIN
AT1G18260	Predicted interologs mapping	FSW = 0.0874	Class C: endoplasmic reticulum	SUPPRESSOR OF LIN-12-LIKE PROTEIN-RELATED / SEL-1 PROTEIN-RELATED
AT1G51740	Predicted Affinity Capture-Western Affinity Capture-Western interologs mapping interaction prediction	FSW = 0.0493	Class C: endoplasmic reticulum	SYP81 (SYNTAXIN OF PLANTS 81) SNAP RECEPTOR/ PROTEIN BINDING
AT1G01020	Predicted Phenotypic Enhancement	FSW = 0.0532	Class C: endoplasmic reticulum	ARV1
AT5G13490	Predicted two hybrid interaction prediction	FSW = 0.0368	Unknown	AAC2 (ADP/ATP CARRIER 2) ATPADP ANTIPORTER/ BINDING
AT5G41790	Predicted interologs mapping interologs mapping	FSW = 0.0308	Unknown	CIP1 (COP1-INTERACTIVE PROTEIN 1) PROTEIN BINDING
AT1G31780	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1505	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S CONSERVED OLIGOMERIC COMPLEX COG6 (INTERPROIPR010490) HAS 281 BLAST HITS TO 279 PROTEINS IN 131 SPECIES ARCHAE - 0 BACTERIA - 2 METAZOA - 132 FUNGI - 106 PLANTS - 21 VIRUSES - 0 OTHER EUKARYOTES - 20 (SOURCE NCBI BLINK)
AT1G73430	Predicted interologs mapping Affinity Capture-Western interaction prediction	FSW = 0.1403	Unknown	SEC34-LIKE FAMILY PROTEIN
AT4G31490	Predicted Affinity Capture-Western	FSW = 0.0845	Unknown	COATOMER BETA SUBUNIT PUTATIVE / BETA-COAT PROTEIN PUTATIVE / BETA-COP PUTATIVE
AT2G45200	Predicted Reconstituted Complex Enriched domain pair Co-expression	FSW = 0.1635	Unknown	GOS12 (GOLGI SNARE 12) SNARE BINDING
AT2G05630	Predicted interologs mapping	FSW = 0.0314	Unknown	AUTOPHAGY 8D (APG8D)
AT1G62040	Predicted interologs mapping	FSW = 0.0345	Unknown	ATG8C (AUTOPHAGY 8C) MICROTUBULE BINDING
AT2G25340	Predicted Reconstituted Complex	FSW = 0.0432	Unknown	ATVAMP712 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 712)
AT1G30470	Predicted Phenotypic Suppression	FSW = 0.0212	Unknown	SIT4 PHOSPHATASE-ASSOCIATED FAMILY PROTEIN
AT1G64790	Predicted Phenotypic Enhancement	FSW = 0.0802	Unknown	BINDING
AT4G04910	Predicted interologs mapping Phenotypic Enhancement Affinity Capture-Western	FSW = 0.1219	Unknown	NSF (N-ETHYLMALEIMIDE SENSITIVE FACTOR) ATP BINDING / BINDING / NUCLEOSIDE-TRIPHOSPHATASE/ NUCLEOTIDE BINDING
AT1G64330	Predicted interologs mapping interologs mapping	FSW = 0.0519	Unknown	MYOSIN HEAVY CHAIN-RELATED
AT2G30710	Predicted Synthetic Lethality interologs mapping Phenotypic Enhancement interaction prediction	FSW = 0.0907	Unknown	RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT5G58060	Predicted Synthetic Lethality Reconstituted Complex Reconstituted Complex Synthetic Rescue interologs mapping	FSW = 0.0764	Unknown	YKT61
AT5G67630	Predicted Phenotypic Enhancement	FSW = 0.0441	Unknown	DNA HELICASE PUTATIVE
AT5G22330	Predicted Phenotypic Enhancement	FSW = 0.0523	Unknown	RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1) PROTEIN BINDING
AT1G18640	Predicted Phenotypic Enhancement	FSW = 0.0799	Unknown	PSP (3-PHOSPHOSERINE PHOSPHATASE) PHOSPHOSERINE PHOSPHATASE
AT2G45300	Predicted Phenotypic Enhancement	FSW = 0.0494	Unknown	3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE / 5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE / EPSP SYNTHASE
AT1G09180	Predicted Affinity Capture-Western Affinity Capture-Western Co-purification	FSW = 0.0845	Unknown	ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1) GTP BINDING
AT5G63110	Predicted Phenotypic Enhancement	FSW = 0.1698	Unknown	HDA6 (HISTONE DEACETYLASE 6) HISTONE DEACETYLASE
AT5G67270	Predicted synthetic growth defect	FSW = 0.1311	Unknown	ATEB1C (MICROTUBULE END BINDING PROTEIN 1) MICROTUBULE BINDING
AT3G12810	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.2866	Unknown	PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G43810	Predicted Phenotypic Enhancement	FSW = 0.1452	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN F PUTATIVE / U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN PUTATIVE / SM PROTEIN F PUTATIVE
AT2G03870	Predicted Phenotypic Enhancement	FSW = 0.0868	Unknown	SMALL NUCLEAR RIBONUCLEOPROTEIN PUTATIVE / SNRNP PUTATIVE / SM PROTEIN PUTATIVE
AT1G02740	Predicted Phenotypic Enhancement	FSW = 0.1591	Unknown	CHROMATIN BINDING
AT2G06210	Predicted Phenotypic Enhancement	FSW = 0.0907	Unknown	ELF8 (EARLY FLOWERING 8) BINDING
AT1G03190	Predicted Phenotypic Enhancement	FSW = 0.1041	Unknown	UVH6 (ULTRAVIOLET HYPERSENSITIVE 6) ATP BINDING / ATP-DEPENDENT DNA HELICASE/ ATP-DEPENDENT HELICASE/ DNA BINDING / HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING
AT1G07370	Predicted Phenotypic Enhancement	FSW = 0.0972	Unknown	PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN) DNA BINDING / DNA POLYMERASE PROCESSIVITY FACTOR/ PROTEIN BINDING
AT2G27470	Predicted Phenotypic Enhancement	FSW = 0.0904	Unknown	NF-YB11 (NUCLEAR FACTOR Y SUBUNIT B11) TRANSCRIPTION FACTOR
AT2G38560	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.1978	Unknown	TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION ELONGATION FACTOR/ TRANSCRIPTION FACTOR
AT2G18760	Predicted Synthetic Lethality	FSW = 0.0296	Unknown	CHR8 (CHROMATIN REMODELING 8) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G36740	Predicted Synthetic Lethality Phenotypic Enhancement	FSW = 0.3220	Unknown	SWC2 DNA BINDING / TRANSCRIPTION FACTOR
AT2G44950	Predicted Phenotypic Enhancement	FSW = 0.2013	Unknown	HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT1G13560	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.0115	Unknown	AAPT1 (AMINOALCOHOLPHOSPHOTRANSFERASE 1) PHOSPHATIDYLTRANSFERASE/ PHOSPHOTRANSFERASE FOR OTHER SUBSTITUTED PHOSPHATE GROUPS
AT1G75510	Predicted Phenotypic Enhancement	FSW = 0.1124	Unknown	TRANSCRIPTION INITIATION FACTOR IIF BETA SUBUNIT (TFIIF-BETA) FAMILY PROTEIN
AT3G24350	Predicted interaction prediction Synthetic Lethality Reconstituted Complex Reconstituted Complex Reconstituted Complex Reconstituted Complex Co-purification Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Affinity Capture-Western Synthetic Rescue interologs mapping Enriched domain pair Co-expression	FSW = 0.1759	Unknown	SYP32 (SYNTAXIN OF PLANTS 32) SNAP RECEPTOR
AT1G04980	Predicted Phenotypic Enhancement	FSW = 0.0156	Unknown	ATPDIL2-2 (PDI-LIKE 2-2) PROTEIN DISULFIDE ISOMERASE
AT3G47690	Predicted synthetic growth defect	FSW = 0.0841	Unknown	ATEB1A MICROTUBULE BINDING
AT5G19910	Predicted Phenotypic Enhancement	FSW = 0.2367	Unknown	SOH1 FAMILY PROTEIN
AT5G57450	Predicted interaction prediction two hybrid	FSW = 0.0856	Unknown	XRCC3 ATP BINDING / DAMAGED DNA BINDING / PROTEIN BINDING / SINGLE-STRANDED DNA BINDING
AT2G31300	Predicted Synthetic Lethality interaction prediction	FSW = 0.0585	Unknown	ARPC1B (ACTIN-RELATED PROTEIN C1B) ACTIN BINDING / NUCLEOTIDE BINDING
AT2G30910	Predicted Synthetic Lethality	FSW = 0.0412	Unknown	ARPC1A (ACTIN-RELATED PROTEIN C1A) ACTIN BINDING / NUCLEOTIDE BINDING
AT3G07880	Predicted Phenotypic Enhancement	FSW = 0.0305	Unknown	RHO GDP-DISSOCIATION INHIBITOR FAMILY PROTEIN
AT2G36200	Predicted Synthetic Lethality	FSW = 0.0579	Unknown	KINESIN MOTOR PROTEIN-RELATED
AT1G01910	Predicted interologs mapping Phenotypic Enhancement	FSW = 0.1226	Unknown	ANION-TRANSPORTING ATPASE PUTATIVE
AT1G05785	Predicted Phenotypic Enhancement	FSW = 0.0363	Unknown	GOT1-LIKE FAMILY PROTEIN
AT1G05910	Predicted Phenotypic Enhancement	FSW = 0.0742	Unknown	CELL DIVISION CYCLE PROTEIN 48-RELATED / CDC48-RELATED
AT1G18830	Predicted co-fractionation Co-fractionation co-fractionation Co-fractionation	FSW = 0.0318	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT1G32130	Predicted Phenotypic Enhancement	FSW = 0.0747	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CELLULAR_COMPONENT UNKNOWN EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S TFIIS N-TERMINAL (INTERPROIPR017923) IWS1 C-TERMINAL (INTERPROIPR008654) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS IWS1 C-TERMINUS FAMILY PROTEIN (TAIRAT4G190001) HAS 907 BLAST HITS TO 871 PROTEINS IN 182 SPECIES ARCHAE - 4 BACTERIA - 14 METAZOA - 417 FUNGI - 195 PLANTS - 42 VIRUSES - 8 OTHER EUKARYOTES - 227 (SOURCE NCBI BLINK)
AT1G54140	Predicted Phenotypic Suppression	FSW = 0.1106	Unknown	TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT1G59890	Predicted Phenotypic Enhancement	FSW = 0.2600	Unknown	SNL5 (SIN3-LIKE 5)
AT1G73570	Predicted Synthetic Lethality Synthetic Lethality	FSW = 0.0557	Unknown	SUPPRESSOR OF LIN-12-LIKE PROTEIN-RELATED / SEL-1 PROTEIN-RELATED
AT1G79990	Predicted interologs mapping Affinity Capture-Western interaction prediction	FSW = 0.1359	Unknown	LOCATED IN ENDOMEMBRANE SYSTEM COPI VESICLE COAT GOLGI MEMBRANE EXPRESSED IN 25 PLANT STRUCTURES EXPRESSED DURING 15 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S SYS1 HOMOLOGUE (INTERPROIPR016973) HAS 55556 BLAST HITS TO 24059 PROTEINS IN 620 SPECIES ARCHAE - 38 BACTERIA - 5697 METAZOA - 25539 FUNGI - 10898 PLANTS - 5309 VIRUSES - 0 OTHER EUKARYOTES - 8075 (SOURCE NCBI BLINK)
AT2G17980	Predicted Synthetic Rescue Synthetic Lethality Reconstituted Complex Phenotypic Suppression Affinity Capture-Western interologs mapping interaction prediction	FSW = 0.1606	Unknown	ATSLY1 PROTEIN TRANSPORTER
AT2G22530	Predicted Phenotypic Enhancement	FSW = 0.0950	Unknown	CATALYTIC/ TRANSFERASE
AT2G23070	Predicted Phenotypic Suppression	FSW = 0.0617	Unknown	CASEIN KINASE II ALPHA CHAIN PUTATIVE
AT2G34770	Predicted interologs mapping Phenotypic Enhancement Co-expression	FSW = 0.1518	Unknown	FAH1 (FATTY ACID HYDROXYLASE 1) CATALYTIC/ FATTY ACID ALPHA-HYDROXYLASE
AT2G44150	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.2073	Unknown	ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3) HISTONE-LYSINE N-METHYLTRANSFERASE
AT3G02820	Predicted Phenotypic Enhancement	FSW = 0.0720	Unknown	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN
AT3G12180	Predicted Phenotypic Enhancement	FSW = 0.1937	Unknown	CORNICHON FAMILY PROTEIN
AT3G18520	Predicted Phenotypic Enhancement	FSW = 0.1011	Unknown	HDA15 HISTONE DEACETYLASE
AT3G20800	Predicted Phenotypic Enhancement	FSW = 0.0646	Unknown	RCD1-LIKE CELL DIFFERENTIATION PROTEIN PUTATIVE
AT3G22142	Predicted Phenotypic Enhancement	FSW = 0.1610	Unknown	STRUCTURAL CONSTITUENT OF CELL WALL
AT3G22480	Predicted interologs mapping Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1989	Unknown	PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT3G22590	Predicted Synthetic Lethality Synthetic Lethality Phenotypic Enhancement interaction prediction	FSW = 0.2177	Unknown	RNA POL II ACCESSORY FACTOR CDC73 FAMILY PROTEIN
AT3G25100	Predicted Synthetic Lethality	FSW = 0.0803	Unknown	CDC45 (CELL DIVISION CYCLE 45)
AT3G42660	Predicted Synthetic Lethality interaction prediction	FSW = 0.1676	Unknown	NUCLEOTIDE BINDING
AT4G14160	Predicted Phenotypic Suppression Affinity Capture-Western fluorescence acceptor donor pair fluorescence acceptor donor pair interologs mapping interaction prediction	FSW = 0.1026	Unknown	TRANSPORT PROTEIN PUTATIVE
AT4G17890	Predicted interologs mapping	FSW = 0.1511	Unknown	AGD8 (ARF-GAP DOMAIN 8) ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING
AT4G34450	Predicted co-fractionation Co-fractionation Affinity Capture-Western co-fractionation interologs mapping Affinity Capture-Western Synthetic Rescue interaction prediction	FSW = 0.1362	Unknown	COATOMER GAMMA-2 SUBUNIT PUTATIVE / GAMMA-2 COAT PROTEIN PUTATIVE / GAMMA-2 COP PUTATIVE
AT5G13680	Predicted Phenotypic Enhancement	FSW = 0.1028	Unknown	ABO1 (ABA-OVERLY SENSITIVE 1) TRANSCRIPTION ELONGATION REGULATOR
AT5G22840	Predicted Phenotypic Enhancement	FSW = 0.0108	Unknown	PROTEIN KINASE FAMILY PROTEIN
AT5G27970	Predicted interologs mapping Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1494	Unknown	BINDING
AT5G42000	Predicted Phenotypic Enhancement Phenotypic Enhancement	FSW = 0.1898	Unknown	ORMDL FAMILY PROTEIN
AT5G45600	Predicted Phenotypic Enhancement Synthetic Lethality	FSW = 0.2378	Unknown	GAS41 PROTEIN BINDING
AT5G50320	Predicted Phenotypic Enhancement	FSW = 0.1232	Unknown	ELO3 (ELONGATA 3) HISTONE ACETYLTRANSFERASE
AT5G52210	Predicted interologs mapping Phenotypic Suppression	FSW = 0.0902	Unknown	ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1) GTP BINDING
AT5G54750	Predicted Synthetic Lethality interaction prediction	FSW = 0.0750	Unknown	TRANSPORT PROTEIN PARTICLE (TRAPP) COMPONENT BET3 PUTATIVE
AT5G55310	Predicted Phenotypic Suppression	FSW = 0.0742	Unknown	TOP1BETA (DNA TOPOISOMERASE 1 BETA) DNA TOPOISOMERASE TYPE I
AT5G59440	Predicted Synthetic Lethality interaction prediction	FSW = 0.0058	Unknown	ZEU1 (ZEUS1) ATP BINDING / THYMIDYLATE KINASE
AT5G61150	Predicted Phenotypic Enhancement	FSW = 0.2224	Unknown	VIP4 (VERNALIZATION INDEPENDENCE 4) PROTEIN BINDING
AT5G63610	Predicted Phenotypic Suppression	FSW = 0.0687	Unknown	CDKE1 (CYCLIN-DEPENDENT KINASE E1) ATP BINDING / KINASE/ PROTEIN KINASE/ PROTEIN SERINE/THREONINE KINASE
AT1G49540	Predicted Phenotypic Enhancement	FSW = 0.1219	Unknown	NUCLEOTIDE BINDING
AT1G61040	Predicted Phenotypic Enhancement	FSW = 0.1452	Unknown	VIP5 (VERNALIZATION INDEPENDENCE 5) DNA BINDING
AT1G66740	Predicted Phenotypic Enhancement	FSW = 0.1138	Unknown	SGA2
AT1G79730	Predicted Phenotypic Enhancement	FSW = 0.1398	Unknown	ELF7 (EARLY FLOWERING 7)
AT2G02760	Predicted Phenotypic Enhancement	FSW = 0.1497	Unknown	ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2) UBIQUITIN-PROTEIN LIGASE
AT2G27970	Predicted Phenotypic Enhancement	FSW = 0.0330	Unknown	CKS2 (CDK-SUBUNIT 2) CYCLIN-DEPENDENT PROTEIN KINASE/ CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT3G01090	Predicted Phenotypic Enhancement	FSW = 0.0525	Unknown	AKIN10 (ARABIDOPSIS SNF1 KINASE HOMOLOG 10) PROTEIN BINDING / PROTEIN KINASE
AT3G05000	Predicted interologs mapping Phenotypic Suppression	FSW = 0.0350	Unknown	TRANSPORT PROTEIN PARTICLE (TRAPP) COMPONENT BET3 FAMILY PROTEIN
AT3G18860	Predicted Phenotypic Suppression	FSW = 0.1837	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G21060	Predicted Phenotypic Enhancement	FSW = 0.1752	Unknown	TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G54380	Predicted Phenotypic Enhancement	FSW = 0.1330	Unknown	SAC3/GANP FAMILY PROTEIN
AT4G22140	Predicted Phenotypic Enhancement	FSW = 0.1022	Unknown	DNA BINDING / PROTEIN BINDING / ZINC ION BINDING
AT4G33240	Predicted Phenotypic Enhancement	FSW = 0.1301	Unknown	1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE/ ATP BINDING / PHOSPHATIDYLINOSITOL PHOSPHATE KINASE/ PROTEIN BINDING / ZINC ION BINDING
AT5G05010	Predicted Affinity Capture-Western interaction prediction	FSW = 0.0989	Unknown	CLATHRIN ADAPTOR COMPLEXES MEDIUM SUBUNIT-RELATED
AT5G13780	Predicted Phenotypic Enhancement	FSW = 0.1132	Unknown	GCN5-RELATED N-ACETYLTRANSFERASE PUTATIVE
AT5G41880	Predicted Phenotypic Enhancement	FSW = 0.0747	Unknown	POLA3 DNA PRIMASE
AT5G46030	Predicted Phenotypic Enhancement	FSW = 0.1086	Unknown	UNKNOWN PROTEIN
AT5G65180	Predicted Phenotypic Suppression	FSW = 0.1584	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF618 (INTERPROIPR006903) REGULATION OF NUCLEAR PRE-MRNA PROTEIN (INTERPROIPR006569) ENTH/VHS (INTERPROIPR008942) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G100601) HAS 3523 BLAST HITS TO 3241 PROTEINS IN 333 SPECIES ARCHAE - 25 BACTERIA - 251 METAZOA - 1575 FUNGI - 421 PLANTS - 142 VIRUSES - 17 OTHER EUKARYOTES - 1092 (SOURCE NCBI BLINK)
AT5G67320	Predicted Phenotypic Enhancement	FSW = 0.1067	Unknown	HOS15 (HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 15)
AT4G31480	Predicted Affinity Capture-Western interaction prediction	FSW = 0.0756	Unknown	COATOMER BETA SUBUNIT PUTATIVE / BETA-COAT PROTEIN PUTATIVE / BETA-COP PUTATIVE
AT1G52360	Predicted Affinity Capture-Western interologs mapping	FSW = 0.0933	Unknown	COATOMER PROTEIN COMPLEX SUBUNIT BETA 2 (BETA PRIME) PUTATIVE
AT1G05520	Predicted Affinity Capture-Western fluorescence acceptor donor pair fluorescence acceptor donor pair Phenotypic Suppression	FSW = 0.0969	Unknown	TRANSPORT PROTEIN PUTATIVE
AT3G44340	Predicted Affinity Capture-Western fluorescence acceptor donor pair fluorescence acceptor donor pair	FSW = 0.1218	Unknown	CEF (CLONE EIGHTY-FOUR) PROTEIN BINDING / TRANSPORTER/ ZINC ION BINDING
AT2G35210	Predicted interologs mapping	FSW = 0.1286	Unknown	RPA (ROOT AND POLLEN ARFGAP) ARF GTPASE ACTIVATOR/ DNA BINDING / ZINC ION BINDING
AT1G51160	Predicted interologs mapping interaction prediction	FSW = 0.1216	Unknown	SYNBINDIN PUTATIVE
AT3G03180	Predicted interologs mapping	FSW = 0.0500	Unknown	GOT1-LIKE FAMILY PROTEIN
AT1G12340	Predicted interologs mapping	FSW = 0.1589	Unknown	FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN INTRACELLULAR SIGNALING CASCADE LOCATED IN MEMBRANE EXPRESSED IN MALE GAMETOPHYTE POLLEN TUBE EXPRESSED DURING L MATURE POLLEN STAGE M GERMINATED POLLEN STAGE CONTAINS INTERPRO DOMAIN/S CORNICHON (INTERPROIPR003377) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS CORNICHON FAMILY PROTEIN (TAIRAT1G123901) HAS 463 BLAST HITS TO 463 PROTEINS IN 125 SPECIES ARCHAE - 0 BACTERIA - 0 METAZOA - 278 FUNGI - 110 PLANTS - 41 VIRUSES - 0 OTHER EUKARYOTES - 34 (SOURCE NCBI BLINK)
AT2G18000	Predicted Synthetic Lethality	FSW = 0.1218	Unknown	TAF14 (TBP-ASSOCIATED FACTOR 14)
AT1G60970	Predicted interaction prediction	FSW = 0.0848	Unknown	CLATHRIN ADAPTOR COMPLEX SMALL CHAIN FAMILY PROTEIN

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Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from

Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment

Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment

Class C: Same as Class A but the PPI is predicted

Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB

Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

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If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454

Welcome to AtPIN

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AT1G11890 - ( SEC22 transporter )

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