Arabidopsis thaliana protein interaction network
Laboratório de Biologia Integrativa e Sistêmica (LaBIS)
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AT1G08780 - ( AIP3 (ABI3-INTERACTING PROTEIN 3) unfolded protein binding )

132 Proteins interacs with AT1G08780
LocusMethodFSW Cellular Compartment Classification (C3)Description
AT3G24650

Experimental

pull down

Reconstituted Complex

FSW = 0.0080

Unknown

ABI3 (ABA INSENSITIVE 3) DNA BINDING / BASAL TRANSCRIPTION REPRESSOR/ TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR
AT4G14960

Predicted

interologs mapping

FSW = 0.0619

Unknown

TUA6 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT4G29130

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0504

Unknown

HXK1 (HEXOKINASE 1) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT1G78900

Predicted

Affinity Capture-MS

FSW = 0.0454

Unknown

VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A) ATP BINDING / HYDROGEN ION TRANSPORTING ATP SYNTHASE ROTATIONAL MECHANISM / HYDROLASE ACTING ON ACID ANHYDRIDES CATALYZING TRANSMEMBRANE MOVEMENT OF SUBSTANCES / PROTON-TRANSPORTING ATPASE ROTATIONAL MECHANISM
AT1G04820Predicted

interologs mapping

FSW = 0.0620

Unknown

TUA4 STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT1G07770

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0150

Unknown

RPS15A (RIBOSOMAL PROTEIN S15A) STRUCTURAL CONSTITUENT OF RIBOSOME
AT3G28715

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0126

Unknown

H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT3G28710

Predicted

Synthetic Lethality

FSW = 0.0122

Unknown

H+-TRANSPORTING TWO-SECTOR ATPASE PUTATIVE
AT4G01320

Predicted

Synthetic Lethality

interologs mapping

Phenotypic Enhancement

interaction prediction

FSW = 0.0410

Unknown

ATSTE24 ENDOPEPTIDASE/ METALLOENDOPEPTIDASE
AT3G60840

Predicted

interaction prediction

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2044

Unknown

MAP65-4 (MICROTUBULE-ASSOCIATED PROTEIN 65-4)
AT5G19740

Predicted

Phenotypic Enhancement

FSW = 0.1370

Unknown

PEPTIDASE M28 FAMILY PROTEIN
AT2G01690

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0626

Unknown

BINDING
AT2G30710

Predicted

interologs mapping

Phenotypic Suppression

FSW = 0.0140

Unknown

RABGAP/TBC DOMAIN-CONTAINING PROTEIN
AT3G22110

Predicted

Phenotypic Suppression

FSW = 0.1085

Unknown

PAC1 ENDOPEPTIDASE/ PEPTIDASE/ THREONINE-TYPE ENDOPEPTIDASE
AT5G13710

Predicted

Phenotypic Suppression

FSW = 0.0676

Unknown

SMT1 (STEROL METHYLTRANSFERASE 1) STEROL 24-C-METHYLTRANSFERASE
AT1G50460

Predicted

Synthetic Lethality

FSW = 0.0636

Unknown

HKL1 (HEXOKINASE-LIKE 1) ATP BINDING / FRUCTOKINASE/ GLUCOKINASE/ HEXOKINASE
AT4G01370

Predicted

Phenotypic Suppression

FSW = 0.0254

Unknown

ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4) MAP KINASE/ KINASE
AT3G02520

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.0833

Unknown

GRF7 (GENERAL REGULATORY FACTOR 7) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G71440

Predicted

interaction prediction

Synthetic Lethality

Phenotypic Enhancement

Co-expression

FSW = 0.2179

Unknown

PFI (PFIFFERLING)
AT1G35160

Predicted

Synthetic Lethality

FSW = 0.0491

Unknown

GF14 PHI (GF14 PROTEIN PHI CHAIN) PROTEIN BINDING / PROTEIN PHOSPHORYLATED AMINO ACID BINDING
AT1G49340

Predicted

Synthetic Lethality

FSW = 0.0519

Unknown

ATPI4K ALPHA 1-PHOSPHATIDYLINOSITOL 4-KINASE/ INOSITOL OR PHOSPHATIDYLINOSITOL KINASE
AT3G61650

Predicted

interaction prediction

Synthetic Lethality

Affinity Capture-Western

interologs mapping

FSW = 0.0864

Unknown

TUBG1 (GAMMA-TUBULIN) GTP BINDING / GTPASE/ STRUCTURAL MOLECULE
AT5G23630

Predicted

interologs mapping

Phenotypic Enhancement

Phenotypic Enhancement

FSW = 0.1112

Unknown

ATPASE E1-E2 TYPE FAMILY PROTEIN / HALOACID DEHALOGENASE-LIKE HYDROLASE FAMILIY PROTEIN
AT5G52640

Predicted

Synthetic Lethality

FSW = 0.0600

Unknown

ATHSP901 (HEAT SHOCK PROTEIN 901) ATP BINDING / UNFOLDED PROTEIN BINDING
AT1G64740

Predicted

in vitro

FSW = 0.0222

Unknown

TUA1 (ALPHA-1 TUBULIN) STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT1G73180

Predicted

Synthetic Lethality

FSW = 0.0268

Unknown

EUKARYOTIC TRANSLATION INITIATION FACTOR-RELATED
AT4G26110

Predicted

Phenotypic Enhancement

FSW = 0.0490

Unknown

NAP11 (NUCLEOSOME ASSEMBLY PROTEIN11) DNA BINDING
AT1G10900

Predicted

Synthetic Lethality

FSW = 0.0345

Unknown

PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN
AT1G08970

Predicted

Synthetic Lethality

FSW = 0.0275

Unknown

NF-YC9 (NUCLEAR FACTOR Y SUBUNIT C9) DNA BINDING / TRANSCRIPTION FACTOR
AT2G44680

Predicted

Phenotypic Suppression

FSW = 0.0747

Unknown

CKB4 (CASEIN KINASE II BETA SUBUNIT 4) PROTEIN SERINE/THREONINE KINASE
AT1G56170

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0203

Unknown

NF-YC2 (NUCLEAR FACTOR Y SUBUNIT C2) DNA BINDING / TRANSCRIPTION ACTIVATOR/ TRANSCRIPTION FACTOR
AT4G05190

Predicted

Synthetic Lethality

Co-expression

FSW = 0.2198

Unknown

ATK5 (ARABIDOPSIS THALIANA KINESIN 5) MICROTUBULE MOTOR
AT5G67270

Predicted

interaction prediction

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

Co-expression

FSW = 0.3182

Unknown

ATEB1C (MICROTUBULE END BINDING PROTEIN 1) MICROTUBULE BINDING
AT2G38810

Predicted

interaction prediction

Co-expression

FSW = 0.1448

Unknown

HTA8 (HISTONE H2A 8) DNA BINDING
AT3G12810

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

interaction prediction

FSW = 0.2504

Unknown

PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) ATP BINDING / DNA BINDING / HELICASE/ NUCLEIC ACID BINDING
AT5G35910

Predicted

Phenotypic Suppression

FSW = 0.1268

Unknown

3-5 EXONUCLEASE DOMAIN-CONTAINING PROTEIN / HELICASE AND RNASE D C-TERMINAL DOMAIN-CONTAINING PROTEIN / HRDC DOMAIN-CONTAINING PROTEIN
AT3G44530

Predicted

Phenotypic Enhancement

FSW = 0.0799

Unknown

HIRA (ARABIDOPSIS HOMOLOG OF HISTONE CHAPERONE HIRA) NUCLEOTIDE BINDING / PROTEIN BINDING
AT3G17590

Predicted

Phenotypic Enhancement

FSW = 0.0354

Unknown

BSH (BUSHY GROWTH) CHROMATIN BINDING / PROTEIN BINDING
AT3G13940

Predicted

Phenotypic Suppression

FSW = 0.0917

Unknown

DNA BINDING / DNA-DIRECTED RNA POLYMERASE
AT1G02740

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1026

Unknown

CHROMATIN BINDING
AT1G05120

Predicted

Phenotypic Enhancement

FSW = 0.0264

Unknown

SNF2 DOMAIN-CONTAINING PROTEIN / HELICASE DOMAIN-CONTAINING PROTEIN / RING FINGER DOMAIN-CONTAINING PROTEIN
AT2G35670

Predicted

Phenotypic Suppression

FSW = 0.1772

Unknown

FIS2 (FERTILIZATION INDEPENDENT SEED 2) TRANSCRIPTION FACTOR
AT1G07370

Predicted

Phenotypic Enhancement

FSW = 0.1483

Unknown

PCNA1 (PROLIFERATING CELLULAR NUCLEAR ANTIGEN) DNA BINDING / DNA POLYMERASE PROCESSIVITY FACTOR/ PROTEIN BINDING
AT2G13370

Predicted

Phenotypic Suppression

FSW = 0.1769

Unknown

CHR5 (CHROMATIN REMODELING 5) ATP BINDING / DNA BINDING / CHROMATIN BINDING / HELICASE/ NUCLEIC ACID BINDING
AT2G24500

Predicted

Phenotypic Suppression

FSW = 0.1106

Unknown

FZF TRANSCRIPTION FACTOR
AT2G36740

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2131

Unknown

SWC2 DNA BINDING / TRANSCRIPTION FACTOR
AT2G38560

Predicted

Phenotypic Enhancement

FSW = 0.0976

Unknown

TFIIS (TRANSCRIPT ELONGATION FACTOR IIS) DNA BINDING / RNA POLYMERASE II TRANSCRIPTION ELONGATION FACTOR/ TRANSCRIPTION FACTOR
AT2G06210

Predicted

Phenotypic Suppression

FSW = 0.1092

Unknown

ELF8 (EARLY FLOWERING 8) BINDING
AT2G44950

Predicted

two hybrid

interaction prediction

FSW = 0.1764

Unknown

HUB1 (HISTONE MONO-UBIQUITINATION 1) PROTEIN BINDING / PROTEIN HOMODIMERIZATION/ UBIQUITIN-PROTEIN LIGASE/ ZINC ION BINDING
AT1G72330

Predicted

Synthetic Lethality

FSW = 0.0478

Unknown

ALAAT2 (ALANINE AMINOTRANSFERASE 2) ATP BINDING / L-ALANINE2-OXOGLUTARATE AMINOTRANSFERASE
AT3G14270

Predicted

interaction prediction

FSW = 0.0389

Unknown

PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN
AT1G75510

Predicted

Phenotypic Enhancement

FSW = 0.1513

Unknown

TRANSCRIPTION INITIATION FACTOR IIF BETA SUBUNIT (TFIIF-BETA) FAMILY PROTEIN
AT1G29330

Predicted

interologs mapping

Phenotypic Enhancement

FSW = 0.0034

Unknown

ERD2 (ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2) KDEL SEQUENCE BINDING / RECEPTOR
AT1G14690

Predicted

Synthetic Lethality

FSW = 0.1644

Unknown

MAP65-7 (MICROTUBULE-ASSOCIATED PROTEIN 65-7)
AT3G47690

Predicted

Synthetic Lethality

Synthetic Lethality

Synthetic Lethality

FSW = 0.2876

Unknown

ATEB1A MICROTUBULE BINDING
AT1G57550

Predicted

Synthetic Lethality

FSW = 0.0531

Unknown

HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT3G25980

Predicted

interaction prediction

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

Co-expression

FSW = 0.1483

Unknown

MITOTIC SPINDLE CHECKPOINT PROTEIN PUTATIVE (MAD2)
AT2G31300

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0946

Unknown

ARPC1B (ACTIN-RELATED PROTEIN C1B) ACTIN BINDING / NUCLEOTIDE BINDING
AT2G30910

Predicted

Synthetic Lethality

FSW = 0.0756

Unknown

ARPC1A (ACTIN-RELATED PROTEIN C1A) ACTIN BINDING / NUCLEOTIDE BINDING
AT3G28730

Predicted

Phenotypic Enhancement

FSW = 0.0602

Unknown

ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP) TRANSCRIPTION FACTOR
AT5G19910

Predicted

Phenotypic Suppression

FSW = 0.1854

Unknown

SOH1 FAMILY PROTEIN
AT2G36200

Predicted

interaction prediction

Synthetic Lethality

Synthetic Lethality

FSW = 0.2624

Unknown

KINESIN MOTOR PROTEIN-RELATED
AT4G10620

Predicted

two hybrid

FSW = 0.0075

Unknown

INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN CHLOROPLAST EXPRESSED IN 23 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS GTP BINDING (TAIRAT3G571801) HAS 777 BLAST HITS TO 699 PROTEINS IN 334 SPECIES ARCHAE - 15 BACTERIA - 397 METAZOA - 157 FUNGI - 74 PLANTS - 61 VIRUSES - 0 OTHER EUKARYOTES - 73 (SOURCE NCBI BLINK)
AT1G04730Predicted

interaction prediction

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

Co-expression

FSW = 0.2303

Unknown

AAA-TYPE ATPASE FAMILY PROTEIN
AT1G05910

Predicted

Synthetic Lethality

Phenotypic Enhancement

interaction prediction

FSW = 0.1010

Unknown

CELL DIVISION CYCLE PROTEIN 48-RELATED / CDC48-RELATED
AT1G29990

Predicted

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Phenotypic Suppression

interologs mapping

interaction prediction

FSW = 0.6627

Unknown

PDF6 (PREFOLDIN 6) UNFOLDED PROTEIN BINDING
AT1G52740

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

Synthetic Lethality

FSW = 0.2476

Unknown

HTA9 (HISTONE H2A PROTEIN 9) DNA BINDING
AT1G79890

Predicted

interaction prediction

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2119

Unknown

HELICASE-RELATED
AT1G80410

Predicted

synthetic growth defect

FSW = 0.0969

Unknown

EMB2753 (EMBRYO DEFECTIVE 2753) BINDING
AT2G30410

Predicted

interaction prediction

Synthetic Lethality

Synthetic Lethality

interologs mapping

FSW = 0.1286

Unknown

KIS (KIESEL) UNFOLDED PROTEIN BINDING
AT2G44150

Predicted

Synthetic Lethality

Synthetic Lethality

Phenotypic Enhancement

interaction prediction

FSW = 0.1639

Unknown

ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3) HISTONE-LYSINE N-METHYLTRANSFERASE
AT2G44580

Predicted

interaction prediction

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

FSW = 0.2052

Unknown

PROTEIN BINDING / ZINC ION BINDING
AT3G02820

Predicted

Synthetic Lethality

interaction prediction

Co-expression

FSW = 0.1558

Unknown

ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN
AT3G09920

Predicted

Synthetic Lethality

FSW = 0.0259

Unknown

PIP5K9 (PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE) 1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE/ ATP BINDING / PHOSPHATIDYLINOSITOL PHOSPHATE KINASE
AT3G20800

Predicted

Phenotypic Enhancement

FSW = 0.0857

Unknown

RCD1-LIKE CELL DIFFERENTIATION PROTEIN PUTATIVE
AT3G22480

Predicted

Affinity Capture-MS

Affinity Capture-MS

interologs mapping

interaction prediction

Co-expression

FSW = 0.6570

Unknown

PREFOLDIN-RELATED KE2 FAMILY PROTEIN
AT3G26020

Predicted

Phenotypic Enhancement

FSW = 0.1759

Unknown

SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A) REGULATORY SUBUNIT B PUTATIVE
AT3G27000

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0622

Unknown

ARP2 (ACTIN RELATED PROTEIN 2) PROTEIN BINDING / STRUCTURAL CONSTITUENT OF CYTOSKELETON
AT3G42660

Predicted

interaction prediction

Synthetic Lethality

synthetic growth defect

Phenotypic Enhancement

Co-expression

FSW = 0.2976

Unknown

NUCLEOTIDE BINDING
AT4G15930

Predicted

interaction prediction

Synthetic Lethality

interologs mapping

Phenotypic Enhancement

FSW = 0.0405

Unknown

MICROTUBULE MOTOR
AT4G27180

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2401

Unknown

ATK2 (ARABIDOPSIS THALIANA KINESIN 2) MICROTUBULE BINDING / MICROTUBULE MOTOR
AT4G39050

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1120

Unknown

KINESIN-RELATED PROTEIN (MKRP2)
AT5G09230

Predicted

Phenotypic Suppression

FSW = 0.0543

Unknown

SRT2 (SIRTUIN 2) DNA BINDING / NAD OR NADH BINDING / NAD-DEPENDENT HISTONE DEACETYLASE/ ZINC ION BINDING
AT5G13780

Predicted

synthetic growth defect

FSW = 0.1850

Unknown

GCN5-RELATED N-ACETYLTRANSFERASE PUTATIVE
AT5G23290

Predicted

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Phenotypic Suppression

interologs mapping

interaction prediction

Co-expression

FSW = 0.6053

Unknown

PDF5 (PREFOLDIN 5) UNFOLDED PROTEIN BINDING
AT5G27970Predicted

Phenotypic Suppression

FSW = 0.1172

Unknown

BINDING
AT5G49510

Predicted

interaction prediction

Affinity Capture-Western

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Affinity Capture-MS

Phenotypic Suppression

interologs mapping

Co-expression

FSW = 0.6543

Unknown

PDF3 (PREFOLDIN 3) UNFOLDED PROTEIN BINDING
AT5G50320

Predicted

Phenotypic Enhancement

FSW = 0.0954

Unknown

ELO3 (ELONGATA 3) HISTONE ACETYLTRANSFERASE
AT5G61150

Predicted

Phenotypic Suppression

FSW = 0.1167

Unknown

VIP4 (VERNALIZATION INDEPENDENCE 4) PROTEIN BINDING
AT1G09020

Predicted

Phenotypic Suppression

FSW = 0.0454

Unknown

SNF4 (HOMOLOG OF YEAST SUCROSE NONFERMENTING 4) PROTEIN KINASE ACTIVATOR
AT1G16560

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0518

Unknown

PER1-LIKE FAMILY PROTEIN
AT1G20610

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0319

Unknown

CYCB23 (CYCLIN B23) CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT1G49540

Predicted

Phenotypic Enhancement

FSW = 0.1615

Unknown

NUCLEOTIDE BINDING
AT2G22400

Predicted

Synthetic Lethality

interaction prediction

Co-expression

FSW = 0.0713

Unknown

NOL1/NOP2/SUN FAMILY PROTEIN
AT2G27970

Predicted

Phenotypic Enhancement

FSW = 0.0574

Unknown

CKS2 (CDK-SUBUNIT 2) CYCLIN-DEPENDENT PROTEIN KINASE/ CYCLIN-DEPENDENT PROTEIN KINASE REGULATOR
AT2G29210

Predicted

Synthetic Lethality

FSW = 0.0560

Unknown

SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN
AT2G32850

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0417

Unknown

PROTEIN KINASE FAMILY PROTEIN
AT2G33560

Predicted

Synthetic Lethality

Phenotypic Enhancement

interaction prediction

FSW = 0.0963

Unknown

SPINDLE CHECKPOINT PROTEIN-RELATED
AT3G10070

Predicted

Phenotypic Suppression

FSW = 0.1492

Unknown

TAF12 (TBP-ASSOCIATED FACTOR 12) DNA BINDING / TRANSCRIPTION INITIATION FACTOR
AT3G18860

Predicted

Phenotypic Enhancement

FSW = 0.1678

Unknown

TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN
AT3G22142

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.2293

Unknown

STRUCTURAL CONSTITUENT OF CELL WALL
AT3G46960Predicted

Phenotypic Suppression

FSW = 0.0311

Unknown

ATP BINDING / ATP-DEPENDENT HELICASE/ HELICASE/ HYDROLASE ACTING ON ACID ANHYDRIDES IN PHOSPHORUS-CONTAINING ANHYDRIDES / NUCLEIC ACID BINDING
AT3G47810

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0713

Unknown

MAG1 (MAIGO 1) HYDROLASE/ PROTEIN SERINE/THREONINE PHOSPHATASE
AT3G50960

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0384

Unknown

PLP3A (PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG) BETA-TUBULIN BINDING
AT3G54380

Predicted

Phenotypic Suppression

FSW = 0.2163

Unknown

SAC3/GANP FAMILY PROTEIN
AT4G04210

Predicted

Phenotypic Enhancement

FSW = 0.1232

Unknown

PUX4 PROTEIN BINDING
AT4G08500

Predicted

Synthetic Lethality

FSW = 0.0594

Unknown

MEKK1 (MAP KINASE KINASE KINASE 1) DNA BINDING / MAP KINASE KINASE KINASE/ KINASE/ KINASE BINDING / PROTEIN BINDING
AT4G33240

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.1881

Unknown

1-PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE/ ATP BINDING / PHOSPHATIDYLINOSITOL PHOSPHATE KINASE/ PROTEIN BINDING / ZINC ION BINDING
AT4G38630

Predicted

Phenotypic Suppression

FSW = 0.1056

Unknown

RPN10 (REGULATORY PARTICLE NON-ATPASE 10) PEPTIDE RECEPTOR
AT5G02310

Predicted

Phenotypic Suppression

FSW = 0.0823

Unknown

PRT6 (PROTEOLYSIS 6) UBIQUITIN-PROTEIN LIGASE
AT5G06620

Predicted

Synthetic Lethality

FSW = 0.0414

Unknown

SDG38 (SET DOMAIN PROTEIN 38)
AT5G10260

Predicted

Phenotypic Suppression

FSW = 0.1750

Unknown

ATRABH1E (ARABIDOPSIS RAB GTPASE HOMOLOG H1E) GTP BINDING
AT5G10790

Predicted

Phenotypic Suppression

FSW = 0.1452

Unknown

UBP22 (UBIQUITIN-SPECIFIC PROTEASE 22) UBIQUITIN THIOLESTERASE/ UBIQUITIN-SPECIFIC PROTEASE/ ZINC ION BINDING
AT5G45600

Predicted

Synthetic Lethality

Phenotypic Enhancement

FSW = 0.3298

Unknown

GAS41 PROTEIN BINDING
AT5G48120

Predicted

Phenotypic Suppression

FSW = 0.1739

Unknown

BINDING
AT5G55130

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.0413

Unknown

CNX5 (CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 5) MO-MOLYBDOPTERIN COFACTOR SULFURASE
AT5G61770

Predicted

Phenotypic Suppression

FSW = 0.0314

Unknown

PPAN (PETER PAN-LIKE PROTEIN)
AT5G65180

Predicted

Synthetic Lethality

interaction prediction

FSW = 0.1710

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN EXPRESSED IN 18 PLANT STRUCTURES EXPRESSED DURING 9 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF618 (INTERPROIPR006903) REGULATION OF NUCLEAR PRE-MRNA PROTEIN (INTERPROIPR006569) ENTH/VHS (INTERPROIPR008942) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G100601) HAS 3523 BLAST HITS TO 3241 PROTEINS IN 333 SPECIES ARCHAE - 25 BACTERIA - 251 METAZOA - 1575 FUNGI - 421 PLANTS - 142 VIRUSES - 17 OTHER EUKARYOTES - 1092 (SOURCE NCBI BLINK)
AT5G66100

Predicted

Phenotypic Enhancement

FSW = 0.1474

Unknown

LA DOMAIN-CONTAINING PROTEIN
AT5G67320

Predicted

Synthetic Lethality

Phenotypic Enhancement

interaction prediction

Co-expression

FSW = 0.1358

Unknown

HOS15 (HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 15)
AT5G16270

Predicted

Synthetic Lethality

FSW = 0.0969

Unknown

SYN4 (SISTER CHROMATID COHESION 1 PROTEIN 4)
AT1G16330

Predicted

Synthetic Lethality

FSW = 0.0452

Unknown

CYCB31 (CYCLIN B31) CYCLIN-DEPENDENT PROTEIN KINASE
AT2G18990

Predicted

Synthetic Lethality

FSW = 0.0549

Unknown

TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG)
AT3G26990

Predicted

Synthetic Lethality

FSW = 0.0432

Unknown

FUNCTIONS IN MOLECULAR_FUNCTION UNKNOWN INVOLVED IN BIOLOGICAL_PROCESS UNKNOWN LOCATED IN ENDOMEMBRANE SYSTEM EXPRESSED IN 24 PLANT STRUCTURES EXPRESSED DURING 13 GROWTH STAGES CONTAINS INTERPRO DOMAIN/S PROTEIN OF UNKNOWN FUNCTION DUF618 (INTERPROIPR006903) REGULATION OF NUCLEAR PRE-MRNA PROTEIN (INTERPROIPR006569) ENTH/VHS (INTERPROIPR008942) BEST ARABIDOPSIS THALIANA PROTEIN MATCH IS UNKNOWN PROTEIN (TAIRAT5G100601) HAS 815 BLAST HITS TO 806 PROTEINS IN 138 SPECIES ARCHAE - 0 BACTERIA - 10 METAZOA - 490 FUNGI - 159 PLANTS - 81 VIRUSES - 1 OTHER EUKARYOTES - 74 (SOURCE NCBI BLINK)
AT1G71010

Predicted

Synthetic Lethality

FSW = 0.1019

Unknown

PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE FAMILY PROTEIN
AT1G09000

Predicted

Synthetic Lethality

FSW = 0.0567

Unknown

ANP1 (ARABIDOPSIS NPK1-RELATED PROTEIN KINASE 1) MAP KINASE KINASE KINASE/ KINASE
AT2G18000

Predicted

Synthetic Lethality

FSW = 0.1542

Unknown

TAF14 (TBP-ASSOCIATED FACTOR 14)
AT1G55255Predicted

two hybrid

FSW = 0.0659

Unknown

TAF14 (TBP-ASSOCIATED FACTOR 14)
AT5G54670

Predicted

interaction prediction

FSW = 0.1867

Unknown

ATK3 (ARABIDOPSIS THALIANA KINESIN 3) ATPASE/ MICROTUBULE BINDING / MICROTUBULE MOTOR
AT2G38905

Predicted

interaction prediction

FSW = 0.0698

Unknown

HYDROPHOBIC PROTEIN PUTATIVE / LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN PUTATIVE
AT1G54960

Predicted

interaction prediction

Shared biological function

Co-expression

FSW = 0.0545

Unknown

ANP2 MAP KINASE KINASE KINASE/ KINASE
AT4G37280

Predicted

interaction prediction

FSW = 0.0519

Unknown

MRG FAMILY PROTEIN

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Fasta sequences:

Proteins

DNA

Quick help

Experimental: This means that the indicated PPI was experimentally demonstrated using Arabidopsis thaliana proteins as model of study. The experiment indicated links to the publication of which this interaction was annotated from
Predicted: The indicated PPI was proposed based on ortholgs studies. The experiment indicated links to the publication of the orthologous PPI was annotated from

FSW

FSW is the Functional Similarity Weight. It represents the proportion of interaction partners that two proteins have in common

Learn more - FSWeight top ranked cut offs

C3

Class A: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated and both, target and source, were indicated as expressed in same cellular compartment
Class B: The PPI is a direct evidence (experimental), the subcellular location was experimentally demonstrated but both, target and source, were indicated as expressed in different cellular compartment
Class C: Same as Class A but the PPI is predicted
Class D: Same as Class A but subcellular location was predicted. P(exp|pred) indicates the probability of this particular predicted location be experimentally demonstrated given all data available on AtPINDB
Unknown: There is no available data to calculate the C3 or the data does not fit onto any class previously described

PEP

PEP is the posterior probability of this particular PPI be experimentally demonstrated once it was predicted. For this release p = 0.0030. If they share same cell compartment p = 0.0029

Learn more

How to cite

If you find AtPIN interesting and want to use it in your work please cite us

AtPIN: Arabidopsis thaliana Protein Interaction Network
Marcelo M Brandao, Luiza L Dantas and Marcio C Silva-Filho
BMC Bioinformatics 2009, 10:454

DOI:1471-2105/10/454